FFCP PHASE1:Mm9::chr15:78603841..78603852,-: Difference between revisions
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{{FFCP|EntrezGene=17305|HGNC=|MCL_coexpression_id=34|UniProt=O09008,Q3UPI0|association_with_transcript=22bp_to_NM_008595,uc007wri.1_5end|description=CAGE_peak_2_at_Mfng_5end|id=chr15:78603841..78603852,-|ontology_enrichment_celltype=CL:0000542!9.92e-08!13;CL:0000051!9.92e-08!13;CL:0000988!1.78e-07!32;CL:0002032!1.78e-07!32;CL:0000037!1.78e-07!32;CL:0000566!1.78e-07!32;CL:0000837!1.78e-07!32;CL:0000838!1.92e-07!12;CL:0000084!9.34e-07!11;CL:0000827!9.34e-07!11;CL:0000540!9.81e-07!33;CL:0000047!9.81e-07!33;CL:0000031!9.81e-07!33;CL:0000404!9.81e-07!33|ontology_enrichment_celltype_v019_2=CL:0000034,6.04e-17,97;CL:0000723,1.05e-14,91;CL:0000048,1.05e-14,91;CL:0000988,2.08e-13,32;CL:0002032,2.08e-13,32;CL:0000037,2.08e-13,32;CL:0000837,2.08e-13,32;CL:0000540,4.29e-11,33;CL:0000047,4.29e-11,33;CL:0000031,4.29e-11,33;CL:0000404,4.29e-11,33;CL:0000107,1.55e-10,9;CL:0000838,9.38e-10,12;CL:0002031,4.02e-09,25;CL:0002609,5.47e-09,6;CL:0000542,7.60e-09,13;CL:0000051,7.60e-09,13;CL:0000393,1.16e-08,39;CL:0000211,1.16e-08,39;CL:0000084,2.45e-08,11;CL:0000827,2.45e-08,11;CL:0000221,4.41e-08,44;CL:0000133,4.41e-08,44;CL:0002320,8.60e-08,46;CL:0000134,8.60e-08,46;CL:0000738,1.29e-07,17;CL:0002087,1.29e-07,17;CL:0002319,1.95e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.01e-07!48;UBERON:0002390!3.61e-07!45;UBERON:0003061!3.61e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.55e-10,9;UBERON:0000033,4.00e-10,13;UBERON:0000020,4.08e-09,12;UBERON:0001032,4.08e-09,12;UBERON:0004456,4.08e-09,12;UBERON:0000010,2.58e-08,11;UBERON:0005085,2.89e-08,13;UBERON:0007811,4.52e-08,36;UBERON:0001444,6.67e-08,11;UBERON:0000970,7.85e-08,9;UBERON:0000019,7.85e-08,9;UBERON:0000047,7.85e-08,9;UBERON:0010312,7.85e-08,9;UBERON:0004088,7.85e-08,9;UBERON:0002104,7.85e-08,9;UBERON:0001456,7.85e-08,9;UBERON:0003072,7.85e-08,9;UBERON:0004128,7.85e-08,9;UBERON:0003071,7.85e-08,9;UBERON:0002384,8.60e-08,46;UBERON:0004121,1.74e-07,95;UBERON:0000924,1.74e-07,95;UBERON:0006601,1.74e-07,95|phase1_expression=2.24208385946712,0,0,0,0,0,0,2.06597317506522,1.68946466582,1.63845168425395,0.68487187290202,0.957265907944037,1.71200729931206,1.66098764596095,0,1.01237633694913,0.699561878128147,1.73504190947031,2.05671650408608,1.27316895539409,0.17008658030214,2.97872853602656,1.56719873483361,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0.872100625521786,0,0,0,0,3.6912173332702,0.725362142011344,2.35265659399725,0,0,0,1.21389876515759,1.5869729378161,0.633831403506179,0,0,0.449949858640699,0,0.7104801149461,0,0,1.34796496001021,1.08004750665353,1.26194976810829,0.285650984403804,0.220868540951614,1.95985278743926,2.97120960156533,3.67687514644008,0,0,0.153606533256243,0.791317726381163,0.274462930807229,1.56274011167028,0.558365998002762,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,1.03575153458869,0,0.520455980298408,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0,0.578397427679647,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0.209446706813455,0,4.55297473122497,1.79970819298022,2.41433431438823,0,0,0.753926112677186,0.173824320192276,0.511430914660661,0.20778804455956,0.162241263067758,0.203678727700633,0.870848794270651,0,0,1.30120442962704,2.29902104433473,1.98068342785884,1.35634336052144,1.36072998302656,1.92170580427275,2.34254311399322,0,0,0,0.527853372491847,0.43839146485515,0,0.348252166522167,0.205782136407943,0,0.702213187313235,1.54408744268829,1.98914449576915,0,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0.324275238183423,0.146199987425332,0,0,0.210289948564127,0.102904612379284,0,0,0.853153002140936,0.696710015581316,0.38660238396628,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.569003702859245,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.280543279561274,0.189709611372772,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,0.568474235311454,0.814824882210129,0.848725428875941,0.234690248288502,0.335012514883631,0.238043640886014,0.780534591431195,1.10344600874334,0.8858587585951,0.159454768657487,0.327726629431476,0.345369963731791,0.723245292907558,0,1.08781136763742,0.491764273019036,0.827810238914197,0.160550589987792,0.234423373184406,0,0.252470927204373,1.89304931649754,1.56175497718655,4.73931475012158,0.477937595905104,1.11399337041197,3.11384183867716,1.21443210502468,2.04579100537918,3.55759000151871,0.321321316421807,0.141940085208269,0.890328018336276,0.162886959353576,0.329940245945071,0,0.485561272309963,0.604647113929502,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0,1.08036656418786,0.388076051348264,1.07168517515796,1.24138163549592,1.07021290561242,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0,0.322928853391811,0.180938774784468,0.596861720015682,0.164140899745061,0,0,0.683483523191411,0.412773735926445,0.925972636848558,0.565105371014073,0.27338845544205,1.14389086603261,13.9382312594961,17.2140286358099,15.2019971184866,0,0.790839983952838,0.406638934253697,0.324016022465404,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,1.24267862617385,0,0.149516546043979,0.496375471371293,0.194451188344048,0.387479470433193,0.506868376472335,0.234714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0,2.21207784439725,0.202725215290164,0.924398614483445,1.03936658382236,0.895133478337407,0.79472541912506,1.08175904567972,0.590758108698309,0.605798699688886,0.457240839929999,0.604957110821043,0.779663045918019,0.481059208201647,0.935015217452552,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.830298780673413,2.39414924040619,0.512200817262403,0.729320151204882,0.628839487883947,0.367687016900028,0,0.618105171716683,0.320919209591815,0.252697211763798,0.760437899670719,0.188626341386076,0.37456602987953,0.448176066834085,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.685738504770831,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0.182927972872773,0.526139422875686,0.271608227691724,0,0.474540072496697,0.29551344712669,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0,0.214871054048298,0.382576664137687,0.661774257358546,0.231867835620421|short_description=p2@Mfng}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17305 | |||
|HGNC= | |||
|MCL_coexpression_id=34 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O09008,uniprot:Q3UPI0 | |||
|association_with_transcript=22bp_to_NM_008595,uc007wri.1_5end | |||
|cluster_id=chr15:78603841..78603852,- | |||
|description=CAGE_peak_2_at_Mfng_5end | |||
|id=chr15:78603841..78603852,- | |||
|ontology_enrichment_celltype=CL:0000542!9.92e-08!13;CL:0000051!9.92e-08!13;CL:0000988!1.78e-07!32;CL:0002032!1.78e-07!32;CL:0000037!1.78e-07!32;CL:0000566!1.78e-07!32;CL:0000837!1.78e-07!32;CL:0000838!1.92e-07!12;CL:0000084!9.34e-07!11;CL:0000827!9.34e-07!11;CL:0000540!9.81e-07!33;CL:0000047!9.81e-07!33;CL:0000031!9.81e-07!33;CL:0000404!9.81e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,6.04e-17,97;CL:0000723,1.05e-14,91;CL:0000048,1.05e-14,91;CL:0000988,2.08e-13,32;CL:0002032,2.08e-13,32;CL:0000037,2.08e-13,32;CL:0000837,2.08e-13,32;CL:0000540,4.29e-11,33;CL:0000047,4.29e-11,33;CL:0000031,4.29e-11,33;CL:0000404,4.29e-11,33;CL:0000107,1.55e-10,9;CL:0000838,9.38e-10,12;CL:0002031,4.02e-09,25;CL:0002609,5.47e-09,6;CL:0000542,7.60e-09,13;CL:0000051,7.60e-09,13;CL:0000393,1.16e-08,39;CL:0000211,1.16e-08,39;CL:0000084,2.45e-08,11;CL:0000827,2.45e-08,11;CL:0000221,4.41e-08,44;CL:0000133,4.41e-08,44;CL:0002320,8.60e-08,46;CL:0000134,8.60e-08,46;CL:0000738,1.29e-07,17;CL:0002087,1.29e-07,17;CL:0002319,1.95e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.01e-07!48;UBERON:0002390!3.61e-07!45;UBERON:0003061!3.61e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.55e-10,9;UBERON:0000033,4.00e-10,13;UBERON:0000020,4.08e-09,12;UBERON:0001032,4.08e-09,12;UBERON:0004456,4.08e-09,12;UBERON:0000010,2.58e-08,11;UBERON:0005085,2.89e-08,13;UBERON:0007811,4.52e-08,36;UBERON:0001444,6.67e-08,11;UBERON:0000970,7.85e-08,9;UBERON:0000019,7.85e-08,9;UBERON:0000047,7.85e-08,9;UBERON:0010312,7.85e-08,9;UBERON:0004088,7.85e-08,9;UBERON:0002104,7.85e-08,9;UBERON:0001456,7.85e-08,9;UBERON:0003072,7.85e-08,9;UBERON:0004128,7.85e-08,9;UBERON:0003071,7.85e-08,9;UBERON:0002384,8.60e-08,46;UBERON:0004121,1.74e-07,95;UBERON:0000924,1.74e-07,95;UBERON:0006601,1.74e-07,95 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,2.06597317506522,1.68946466582,1.63845168425395,0.68487187290202,0.957265907944037,1.71200729931206,1.66098764596095,0,1.01237633694913,0.699561878128147,1.73504190947031,2.05671650408608,1.27316895539409,0.17008658030214,2.97872853602656,1.56719873483361,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0.872100625521786,0,0,0,0,3.6912173332702,0.725362142011344,2.35265659399725,0,0,0,1.21389876515759,1.5869729378161,0.633831403506179,0,0,0.449949858640699,0,0.7104801149461,0,0,1.34796496001021,1.08004750665353,1.26194976810829,0.285650984403804,0.220868540951614,1.95985278743926,2.97120960156533,3.67687514644008,0,0,0.153606533256243,0.791317726381163,0.274462930807229,1.56274011167028,0.558365998002762,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,1.03575153458869,0,0.520455980298408,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0,0.578397427679647,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0.209446706813455,0,4.55297473122497,1.79970819298022,2.41433431438823,0,0,0.753926112677186,0.173824320192276,0.511430914660661,0.20778804455956,0.162241263067758,0.203678727700633,0.870848794270651,0,0,1.30120442962704,2.29902104433473,1.98068342785884,1.35634336052144,1.36072998302656,1.92170580427275,2.34254311399322,0,0,0,0.527853372491847,0.43839146485515,0,0.348252166522167,0.205782136407943,0,0.702213187313235,1.54408744268829,1.98914449576915,0,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0.324275238183423,0.146199987425332,0,0,0.210289948564127,0.102904612379284,0,0,0.853153002140936,0.696710015581316,0.38660238396628,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.569003702859245,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.280543279561274,0.189709611372772,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,0.568474235311454,0.814824882210129,0.848725428875941,0.234690248288502,0.335012514883631,0.238043640886014,0.780534591431195,1.10344600874334,0.8858587585951,0.159454768657487,0.327726629431476,0.345369963731791,0.723245292907558,0,1.08781136763742,0.491764273019036,0.827810238914197,0.160550589987792,0.234423373184406,0,0.252470927204373,1.89304931649754,1.56175497718655,4.73931475012158,0.477937595905104,1.11399337041197,3.11384183867716,1.21443210502468,2.04579100537918,3.55759000151871,0.321321316421807,0.141940085208269,0.890328018336276,0.162886959353576,0.329940245945071,0,0.485561272309963,0.604647113929502,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0,1.08036656418786,0.388076051348264,1.07168517515796,1.24138163549592,1.07021290561242,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0,0.322928853391811,0.180938774784468,0.596861720015682,0.164140899745061,0,0,0.683483523191411,0.412773735926445,0.925972636848558,0.565105371014073,0.27338845544205,1.14389086603261,13.9382312594961,17.2140286358099,15.2019971184866,0,0.790839983952838,0.406638934253697,0.324016022465404,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,1.24267862617385,0,0.149516546043979,0.496375471371293,0.194451188344048,0.387479470433193,0.506868376472335,0.234714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0,2.21207784439725,0.202725215290164,0.924398614483445,1.03936658382236,0.895133478337407,0.79472541912506,1.08175904567972,0.590758108698309,0.605798699688886,0.457240839929999,0.604957110821043,0.779663045918019,0.481059208201647,0.935015217452552,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.830298780673413,2.39414924040619,0.512200817262403,0.729320151204882,0.628839487883947,0.367687016900028,0,0.618105171716683,0.320919209591815,0.252697211763798,0.760437899670719,0.188626341386076,0.37456602987953,0.448176066834085,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.685738504770831,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0.182927972872773,0.526139422875686,0.271608227691724,0,0.474540072496697,0.29551344712669,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0,0.214871054048298,0.382576664137687,0.661774257358546,0.231867835620421 | |||
|short_description=p2@Mfng | |||
}} |
Revision as of 14:44, 5 August 2015
Short description: | p2@Mfng |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mfng_5end |
Coexpression cluster: | MCL_coexpression_mm9:34 |
Association with transcript: | 22bp_to_NM_008595, uc007wri.1_5end |
EntrezGene: | 17305 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 6.04e-17 | 97 |
somatic stem cell | 1.05e-14 | 91 |
multi fate stem cell | 1.05e-14 | 91 |
hematopoietic cell | 2.08e-13 | 32 |
hematopoietic oligopotent progenitor cell | 2.08e-13 | 32 |
hematopoietic stem cell | 2.08e-13 | 32 |
hematopoietic multipotent progenitor cell | 2.08e-13 | 32 |
neuron | 4.29e-11 | 33 |
neuronal stem cell | 4.29e-11 | 33 |
neuroblast | 4.29e-11 | 33 |
electrically signaling cell | 4.29e-11 | 33 |
autonomic neuron | 1.55e-10 | 9 |
lymphoid lineage restricted progenitor cell | 9.38e-10 | 12 |
hematopoietic lineage restricted progenitor cell | 4.02e-09 | 25 |
neuron of cerebral cortex | 5.47e-09 | 6 |
lymphocyte | 7.60e-09 | 13 |
common lymphoid progenitor | 7.60e-09 | 13 |
electrically responsive cell | 1.16e-08 | 39 |
electrically active cell | 1.16e-08 | 39 |
T cell | 2.45e-08 | 11 |
pro-T cell | 2.45e-08 | 11 |
ectodermal cell | 4.41e-08 | 44 |
neurectodermal cell | 4.41e-08 | 44 |
connective tissue cell | 8.60e-08 | 46 |
mesenchymal cell | 8.60e-08 | 46 |
leukocyte | 1.29e-07 | 17 |
nongranular leukocyte | 1.29e-07 | 17 |
neural cell | 1.95e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.55e-10 | 9 |
head | 4.00e-10 | 13 |
sense organ | 4.08e-09 | 12 |
sensory system | 4.08e-09 | 12 |
entire sense organ system | 4.08e-09 | 12 |
peripheral nervous system | 2.58e-08 | 11 |
ectodermal placode | 2.89e-08 | 13 |
craniocervical region | 4.52e-08 | 36 |
subdivision of head | 6.67e-08 | 11 |
eye | 7.85e-08 | 9 |
camera-type eye | 7.85e-08 | 9 |
simple eye | 7.85e-08 | 9 |
immature eye | 7.85e-08 | 9 |
ocular region | 7.85e-08 | 9 |
visual system | 7.85e-08 | 9 |
face | 7.85e-08 | 9 |
optic cup | 7.85e-08 | 9 |
optic vesicle | 7.85e-08 | 9 |
eye primordium | 7.85e-08 | 9 |
connective tissue | 8.60e-08 | 46 |
ectoderm-derived structure | 1.74e-07 | 95 |
ectoderm | 1.74e-07 | 95 |
presumptive ectoderm | 1.74e-07 | 95 |