FFCP PHASE1:Mm9::chr13:24593446..24593467,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2059 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:24593446..24593467,+ | |||
|description=CAGE_peak_at_chr13:24593446..24593467,+ | |description=CAGE_peak_at_chr13:24593446..24593467,+ | ||
|id=chr13:24593446..24593467,+ | |id=chr13:24593446..24593467,+ | ||
|ontology_enrichment_celltype=CL:0000988!4.85e-10!32;CL:0002032!4.85e-10!32;CL:0000037!4.85e-10!32;CL:0000566!4.85e-10!32;CL:0000837!4.85e-10!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.16e-15,32;CL:0002032,5.16e-15,32;CL:0000037,5.16e-15,32;CL:0000837,5.16e-15,32;CL:0000049,3.42e-14,19;CL:0000553,4.24e-11,6;CL:0000556,4.24e-11,6;CL:0002320,2.16e-09,46;CL:0000134,2.16e-09,46;CL:0000763,4.17e-09,16;CL:0000219,1.66e-07,54;CL:0000050,2.95e-07,9;CL:0002031,3.83e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.50e-17!48;UBERON:0002405!1.38e-15!70;UBERON:0002390!2.06e-15!45;UBERON:0003061!2.06e-15!45;UBERON:0004177!6.59e-12!29;UBERON:0005057!8.33e-10!51;UBERON:0003408!2.68e-08!24;UBERON:0003081!3.23e-08!88;UBERON:0002370!9.03e-08!23;UBERON:0000974!9.03e-08!23;UBERON:0004807!9.03e-08!23;UBERON:0005058!9.03e-08!23;UBERON:0003351!9.03e-08!23;UBERON:0009113!9.03e-08!23;UBERON:0003295!9.03e-08!23;UBERON:0009722!9.03e-08!23;UBERON:0005562!9.03e-08!23;UBERON:0007690!9.03e-08!23;UBERON:0006562!3.28e-07!24;UBERON:0001557!3.28e-07!24;UBERON:0001042!3.28e-07!24;UBERON:0008814!3.28e-07!24;UBERON:0009145!3.28e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.88e-14,48;UBERON:0002405,1.88e-14,48;UBERON:0002390,9.41e-14,45;UBERON:0003061,9.41e-14,45;UBERON:0002384,2.16e-09,46;UBERON:0002371,4.17e-09,16;UBERON:0001474,7.12e-08,22;UBERON:0004765,7.12e-08,22;UBERON:0001434,7.12e-08,22;UBERON:0002106,5.77e-07,6;UBERON:0004457,5.77e-07,6;UBERON:0000042,5.77e-07,6;UBERON:0004854,5.77e-07,6;UBERON:0009034,5.77e-07,6;UBERON:0002095,5.77e-07,6;UBERON:0004782,5.77e-07,6;UBERON:0003281,5.77e-07,6;UBERON:0009664,5.77e-07,6;UBERON:0002296,5.77e-07,6;UBERON:0005602,5.77e-07,6;UBERON:0001179,5.77e-07,6;UBERON:0006293,5.77e-07,6;UBERON:0003081,8.60e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0.234064526321993,0,0.319088635981346,0.171200729931206,0.0874204024189974,1.33243904726265,2.83465374345756,0.699561878128147,7.5710919685977,10.1464680868247,6.79023442876848,0.0850432901510698,8.83689465687879,11.2315909329742,0.95995453676044,0.68822784320151,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20126078778983,0,1.34437519656986,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,8.54495016035667,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0.884610551949874,0.161766849947409,1.54589062922275,0,0,0,0,1.02182822083437,4.43315960671905,1.19980546198682,3.04968544975355,0,0,0,0,0,0.20778804455956,0,0.203678727700633,1.11966273549084,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,2.1066395619397,2.05878325691772,1.13665399758237,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,1.98251269790279,0,0.213288250535234,0,0,0,0.22237804384487,0.380451252225118,0,0,0,0,0.974820435595601,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0.83422552858047,1.37591296579242,1.12431056192427,0.405720242777006,0.482354319504834,0.25462585178142,0,1.29708181420028,0.274561413188081,0,0,0,0.252578877947112,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,1.20879487306127,0.289298117163023,0,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0,0,0.164140899745061,0,0,3.2465467351592,0.619160603889667,0.740778109478847,1.50694765603753,2.1871076435364,2.74533807847827,5.94924504978494,5.03825228365169,4.14599921413271,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.948033361884535,0.405450430580328,0.821687657318618,0.77952493786677,1.61124026100733,1.58945083825012,1.08175904567972,1.32920574457119,1.21159739937777,0.762068066549998,0.504130925684203,0.487289403698762,1.05833025804362,0.701261413089414,0,0,0,0,0,0.563047426353546,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0.234064526321993,0,0.319088635981346,0.171200729931206,0.0874204024189974,1.33243904726265,2.83465374345756,0.699561878128147,7.5710919685977,10.1464680868247,6.79023442876848,0.0850432901510698,8.83689465687879,11.2315909329742,0.95995453676044,0.68822784320151,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20126078778983,0,1.34437519656986,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,8.54495016035667,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0.884610551949874,0.161766849947409,1.54589062922275,0,0,0,0,1.02182822083437,4.43315960671905,1.19980546198682,3.04968544975355,0,0,0,0,0,0.20778804455956,0,0.203678727700633,1.11966273549084,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,2.1066395619397,2.05878325691772,1.13665399758237,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,1.98251269790279,0,0.213288250535234,0,0,0,0.22237804384487,0.380451252225118,0,0,0,0,0.974820435595601,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0.83422552858047,1.37591296579242,1.12431056192427,0.405720242777006,0.482354319504834,0.25462585178142,0,1.29708181420028,0.274561413188081,0,0,0,0.252578877947112,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,1.20879487306127,0.289298117163023,0,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0,0,0.164140899745061,0,0,3.2465467351592,0.619160603889667,0.740778109478847,1.50694765603753,2.1871076435364,2.74533807847827,5.94924504978494,5.03825228365169,4.14599921413271,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.948033361884535,0.405450430580328,0.821687657318618,0.77952493786677,1.61124026100733,1.58945083825012,1.08175904567972,1.32920574457119,1.21159739937777,0.762068066549998,0.504130925684203,0.487289403698762,1.05833025804362,0.701261413089414,0,0,0,0,0,0.563047426353546,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr13:24593446..24593467,+ | |short_description=p@chr13:24593446..24593467,+ | ||
}} | }} |
Latest revision as of 20:02, 5 August 2015
Short description: | p@chr13:24593446..24593467, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:24593446..24593467, + |
Coexpression cluster: | MCL_coexpression_mm9:2059 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.16e-15 | 32 |
hematopoietic oligopotent progenitor cell | 5.16e-15 | 32 |
hematopoietic stem cell | 5.16e-15 | 32 |
hematopoietic multipotent progenitor cell | 5.16e-15 | 32 |
common myeloid progenitor | 3.42e-14 | 19 |
megakaryocyte progenitor cell | 4.24e-11 | 6 |
megakaryocyte | 4.24e-11 | 6 |
connective tissue cell | 2.16e-09 | 46 |
mesenchymal cell | 2.16e-09 | 46 |
myeloid cell | 4.17e-09 | 16 |
motile cell | 1.66e-07 | 54 |
megakaryocyte-erythroid progenitor cell | 2.95e-07 | 9 |
hematopoietic lineage restricted progenitor cell | 3.83e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.88e-14 | 48 |
immune system | 1.88e-14 | 48 |
hematopoietic system | 9.41e-14 | 45 |
blood island | 9.41e-14 | 45 |
connective tissue | 2.16e-09 | 46 |
bone marrow | 4.17e-09 | 16 |
bone element | 7.12e-08 | 22 |
skeletal element | 7.12e-08 | 22 |
skeletal system | 7.12e-08 | 22 |
spleen | 5.77e-07 | 6 |
cavity lining | 5.77e-07 | 6 |
serous membrane | 5.77e-07 | 6 |
gastrointestinal system mesentery | 5.77e-07 | 6 |
stomach region | 5.77e-07 | 6 |
mesentery | 5.77e-07 | 6 |
gastrointestinal system serosa | 5.77e-07 | 6 |
mesentery of stomach | 5.77e-07 | 6 |
gut mesentery | 5.77e-07 | 6 |
dorsal mesentery | 5.77e-07 | 6 |
dorsal mesogastrium | 5.77e-07 | 6 |
peritoneal cavity | 5.77e-07 | 6 |
spleen primordium | 5.77e-07 | 6 |
lateral plate mesoderm | 8.60e-07 | 87 |