FFCP PHASE1:Mm9::chr13:31912456..31912489,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=390 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:31912456..31912489,- | |||
|description=CAGE_peak_at_chr13:31912456..31912489,- | |description=CAGE_peak_at_chr13:31912456..31912489,- | ||
|id=chr13:31912456..31912489,- | |id=chr13:31912456..31912489,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,6.34e-18,8;CL:0000333,3.63e-14,10;CL:0000095,3.63e-14,10;CL:0000243,3.63e-14,10;CL:0000123,3.63e-14,10;CL:0000125,3.63e-14,10;CL:0000030,3.63e-14,10;CL:0000339,3.63e-14,10;CL:0000128,9.16e-13,6;CL:0000126,9.16e-13,6;CL:0000127,9.16e-13,6;CL:0002293,4.58e-11,3;CL:0000192,7.17e-11,3;CL:0000359,7.17e-11,3;CL:0002539,7.17e-11,3;CL:0000514,7.17e-11,3;CL:0000680,6.86e-09,6;CL:0000187,6.86e-09,6;CL:0000056,6.86e-09,6;CL:0000222,1.27e-07,7;CL:0002605,5.30e-07,2;CL:0002604,5.30e-07,2;CL:0000878,7.50e-07,2;CL:0000129,7.50e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,7.17e-11,3;UBERON:0004237,7.17e-11,3;UBERON:0004695,7.17e-11,3;UBERON:0002111,7.17e-11,3;UBERON:0004178,7.17e-11,3;UBERON:0000947,3.01e-08,4;UBERON:0001637,3.01e-08,4;UBERON:0004573,3.01e-08,4;UBERON:0003509,3.01e-08,4;UBERON:0004571,3.01e-08,4;UBERON:0010191,3.01e-08,4;UBERON:0004572,3.01e-08,4 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1761186246079,5.37297735463427,3.67093504323363,0,2.61630187656536,1.5378032791413,1.55543919259427,2.51975558925653,1.43752564364972,0,0,0,0.257259436035947,1.14613375975503,0,0,0,0.633831403506179,0.677689064138264,0,0.899899717281399,0,0,1.79760066311043,1.15265491596466,0.103689612308478,0,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,0,0.255374676170375,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0.142371680799103,0,0,0.302286240427142,0.579728977403356,0,0,0,0,0,0.280888840263504,10.5666799998396,6.75443611967459,2.82671659608272,0.14084341977668,5.13305909657271,20.3844191765317,7.11066703153331,0,0,0,0.34255163915718,0,0.29688427812965,0.173485326766136,0.913396434936424,0.922461989024234,0.452167921657868,0.23517741427141,0.376999773989026,0,0.722996784599558,0,0.647067399789637,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0.324482526135515,0,0.248813941220186,0,2.52530227063769,0.650602214813519,0,0.540186389416048,0.90422890701429,0.204109497453984,0.2562274405697,0.749613796477831,0.776110112217047,1.5089759505299,1.13463648100692,1.05570674498369,0.657587197282725,0.834141747676794,1.0447564995665,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.329119699826961,0.32833492815819,0.243206428637567,0,0.219550115291051,0,0,0,0,0.528901133327089,0,0.232236671860439,0.38660238396628,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.799739588268102,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.379419222745544,0.738050739898011,0.941992367048249,0.370191491765402,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0.252470927204373,0.631016438832513,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,1.94224508923985,1.209294227859,0.754420319023592,0.590603785761546,0.922305443831782,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0.905510786479282,0,0.532020700926821,0.356737635204141,0.987294123612726,0,0.23467170806371,0,0,0.32977250588296,0,0,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.406638934253697,0,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,1.24267862617385,4.50954350947352,0.747582730219894,0.496375471371293,0.194451188344048,0,0.168956125490778,0,0,0.104859344425711,1.93267296660805,2.59227005632079,0.316011120628178,0.405450430580328,0.924398614483445,0.25984164595559,0.358053391334963,0.198681354781265,0.360586348559907,0,0.504832249740738,0.0762068066549998,0.302478555410522,0.487289403698762,0,0.467507608726276,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,0,0,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,1.24544817101012,0.399024873401031,0,0.243106717068294,0,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.565879024158229,0.842773567228942,0.256100609619477,0.34461281373368,0,0.115884325944855,0.192909220463705,0.824171801606613,0.735994600671987,0.685738504770831,0.70990322463735,0.238436189947321,0.436039249896986,0.282328141245992,0.338458431566706,0.365855945745545,0.263069711437843,0,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1761186246079,5.37297735463427,3.67093504323363,0,2.61630187656536,1.5378032791413,1.55543919259427,2.51975558925653,1.43752564364972,0,0,0,0.257259436035947,1.14613375975503,0,0,0,0.633831403506179,0.677689064138264,0,0.899899717281399,0,0,1.79760066311043,1.15265491596466,0.103689612308478,0,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,0,0.255374676170375,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0.142371680799103,0,0,0.302286240427142,0.579728977403356,0,0,0,0,0,0.280888840263504,10.5666799998396,6.75443611967459,2.82671659608272,0.14084341977668,5.13305909657271,20.3844191765317,7.11066703153331,0,0,0,0.34255163915718,0,0.29688427812965,0.173485326766136,0.913396434936424,0.922461989024234,0.452167921657868,0.23517741427141,0.376999773989026,0,0.722996784599558,0,0.647067399789637,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0.324482526135515,0,0.248813941220186,0,2.52530227063769,0.650602214813519,0,0.540186389416048,0.90422890701429,0.204109497453984,0.2562274405697,0.749613796477831,0.776110112217047,1.5089759505299,1.13463648100692,1.05570674498369,0.657587197282725,0.834141747676794,1.0447564995665,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.329119699826961,0.32833492815819,0.243206428637567,0,0.219550115291051,0,0,0,0,0.528901133327089,0,0.232236671860439,0.38660238396628,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.799739588268102,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.379419222745544,0.738050739898011,0.941992367048249,0.370191491765402,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0.252470927204373,0.631016438832513,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,1.94224508923985,1.209294227859,0.754420319023592,0.590603785761546,0.922305443831782,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0.905510786479282,0,0.532020700926821,0.356737635204141,0.987294123612726,0,0.23467170806371,0,0,0.32977250588296,0,0,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.406638934253697,0,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0,1.24267862617385,4.50954350947352,0.747582730219894,0.496375471371293,0.194451188344048,0,0.168956125490778,0,0,0.104859344425711,1.93267296660805,2.59227005632079,0.316011120628178,0.405450430580328,0.924398614483445,0.25984164595559,0.358053391334963,0.198681354781265,0.360586348559907,0,0.504832249740738,0.0762068066549998,0.302478555410522,0.487289403698762,0,0.467507608726276,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,0,0,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,1.24544817101012,0.399024873401031,0,0.243106717068294,0,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.565879024158229,0.842773567228942,0.256100609619477,0.34461281373368,0,0.115884325944855,0.192909220463705,0.824171801606613,0.735994600671987,0.685738504770831,0.70990322463735,0.238436189947321,0.436039249896986,0.282328141245992,0.338458431566706,0.365855945745545,0.263069711437843,0,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | ||
|short_description=p@chr13:31912456..31912489,- | |short_description=p@chr13:31912456..31912489,- | ||
}} | }} |
Latest revision as of 21:41, 5 August 2015
Short description: | p@chr13:31912456..31912489, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:31912456..31912489, - |
Coexpression cluster: | MCL_coexpression_mm9:390 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 6.34e-18 | 8 |
migratory neural crest cell | 3.63e-14 | 10 |
neuron associated cell | 3.63e-14 | 10 |
glial cell (sensu Vertebrata) | 3.63e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 3.63e-14 | 10 |
glial cell | 3.63e-14 | 10 |
glioblast | 3.63e-14 | 10 |
glioblast (sensu Vertebrata) | 3.63e-14 | 10 |
oligodendrocyte | 9.16e-13 | 6 |
macroglial cell | 9.16e-13 | 6 |
astrocyte | 9.16e-13 | 6 |
epithelial cell of thymus | 4.58e-11 | 3 |
smooth muscle cell | 7.17e-11 | 3 |
vascular associated smooth muscle cell | 7.17e-11 | 3 |
aortic smooth muscle cell | 7.17e-11 | 3 |
smooth muscle myoblast | 7.17e-11 | 3 |
muscle precursor cell | 6.86e-09 | 6 |
muscle cell | 6.86e-09 | 6 |
myoblast | 6.86e-09 | 6 |
mesodermal cell | 1.27e-07 | 7 |
astrocyte of the cerebral cortex | 5.30e-07 | 2 |
astrocyte of the hippocampus | 5.30e-07 | 2 |
central nervous system macrophage | 7.50e-07 | 2 |
microglial cell | 7.50e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 7.17e-11 | 3 |
blood vessel smooth muscle | 7.17e-11 | 3 |
arterial system smooth muscle | 7.17e-11 | 3 |
artery smooth muscle tissue | 7.17e-11 | 3 |
aorta smooth muscle tissue | 7.17e-11 | 3 |
aorta | 3.01e-08 | 4 |
artery | 3.01e-08 | 4 |
systemic artery | 3.01e-08 | 4 |
arterial blood vessel | 3.01e-08 | 4 |
systemic arterial system | 3.01e-08 | 4 |
aortic system | 3.01e-08 | 4 |
arterial system | 3.01e-08 | 4 |