FFCP PHASE1:Mm9::chr11:54722563..54722573,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=206|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:54722563..54722573,-|id=chr11:54722563..54722573,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,3.07e-19,3;CL:0000737,3.07e-19,3;CL:0000746,3.07e-19,3;CL:0000513,3.07e-19,3;CL:0000680,6.30e-10,6;CL:0000187,6.30e-10,6;CL:0000056,6.30e-10,6;CL:0000222,1.38e-08,7;CL:0000355,8.66e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.79e-10!18;UBERON:0000948!2.79e-10!18;UBERON:0005498!2.79e-10!18;UBERON:0004140!2.79e-10!18;UBERON:0009881!2.79e-10!18;UBERON:0004141!2.79e-10!18;UBERON:0003084!2.79e-10!18;UBERON:0007005!2.79e-10!18;UBERON:0004139!2.79e-10!18;UBERON:0004291!2.79e-10!18;UBERON:0003103!1.30e-09!43;UBERON:0004872!1.92e-08!33;UBERON:0004535!2.63e-08!23;UBERON:0001009!2.63e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.10e-09,3;UBERON:0000478,1.10e-09,3;UBERON:0000158,1.10e-09,3;UBERON:0006554,7.39e-09,18;UBERON:0001008,2.19e-08,19;UBERON:0006834,5.41e-08,1;UBERON:0000305,6.29e-08,1;UBERON:0002113,1.53e-07,14;UBERON:0003918,1.53e-07,14;UBERON:0011143,1.53e-07,14;UBERON:0005095,1.53e-07,14;UBERON:0007687,1.53e-07,14;UBERON:0005795,1.66e-07,4;UBERON:0000995,1.66e-07,4;UBERON:0004175,4.71e-07,9;UBERON:0001134,8.66e-07,9;UBERON:0002036,8.66e-07,9;UBERON:0002385,8.66e-07,9;UBERON:0000486,8.66e-07,9;UBERON:0007503,8.66e-07,9;UBERON:0001015,8.66e-07,9;UBERON:0002329,8.66e-07,9;UBERON:0003082,8.66e-07,9;UBERON:0003059,8.66e-07,9;UBERON:0007282,8.66e-07,9;UBERON:0004290,8.66e-07,9;UBERON:0009618,8.66e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.777719596297134,0,0,0,0,0,1.28629718017973,1.43266719969378,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0.230615497256059,0,0,0.251333182659351,4.94389935468748,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.51633655060205,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0.36012412292203,0.23674473558521,0.393528463494808,0.154267112887378,0,0.536546802799238,0,0.16455984991348,0.164167464079095,0,0.292399974850665,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0,0,0.22237804384487,0.570676878337677,0,1.81168850196412,1.50801125280162,0.994782360205754,1.16978452271472,0,0,0,0,0,0,0.610953983535943,0,0.210407459670956,0.948548056863859,1.03327103585722,4.23896565171712,6.91024117962083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0.390267295715598,0,0.221464689648775,0,0.81931657357869,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0,2.81606049676452,0.847328283455281,0.220528398054962,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,5.2551093126331,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.290692833264657,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr11:54722563..54722573,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=206 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:54722563..54722573,- | |||
|description=CAGE_peak_at_chr11:54722563..54722573,- | |||
|id=chr11:54722563..54722573,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,3.07e-19,3;CL:0000737,3.07e-19,3;CL:0000746,3.07e-19,3;CL:0000513,3.07e-19,3;CL:0000680,6.30e-10,6;CL:0000187,6.30e-10,6;CL:0000056,6.30e-10,6;CL:0000222,1.38e-08,7;CL:0000355,8.66e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.79e-10!18;UBERON:0000948!2.79e-10!18;UBERON:0005498!2.79e-10!18;UBERON:0004140!2.79e-10!18;UBERON:0009881!2.79e-10!18;UBERON:0004141!2.79e-10!18;UBERON:0003084!2.79e-10!18;UBERON:0007005!2.79e-10!18;UBERON:0004139!2.79e-10!18;UBERON:0004291!2.79e-10!18;UBERON:0003103!1.30e-09!43;UBERON:0004872!1.92e-08!33;UBERON:0004535!2.63e-08!23;UBERON:0001009!2.63e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.10e-09,3;UBERON:0000478,1.10e-09,3;UBERON:0000158,1.10e-09,3;UBERON:0006554,7.39e-09,18;UBERON:0001008,2.19e-08,19;UBERON:0006834,5.41e-08,1;UBERON:0000305,6.29e-08,1;UBERON:0002113,1.53e-07,14;UBERON:0003918,1.53e-07,14;UBERON:0011143,1.53e-07,14;UBERON:0005095,1.53e-07,14;UBERON:0007687,1.53e-07,14;UBERON:0005795,1.66e-07,4;UBERON:0000995,1.66e-07,4;UBERON:0004175,4.71e-07,9;UBERON:0001134,8.66e-07,9;UBERON:0002036,8.66e-07,9;UBERON:0002385,8.66e-07,9;UBERON:0000486,8.66e-07,9;UBERON:0007503,8.66e-07,9;UBERON:0001015,8.66e-07,9;UBERON:0002329,8.66e-07,9;UBERON:0003082,8.66e-07,9;UBERON:0003059,8.66e-07,9;UBERON:0007282,8.66e-07,9;UBERON:0004290,8.66e-07,9;UBERON:0009618,8.66e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.777719596297134,0,0,0,0,0,1.28629718017973,1.43266719969378,2.57836046138721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0.230615497256059,0,0,0.251333182659351,4.94389935468748,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.51633655060205,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0.36012412292203,0.23674473558521,0.393528463494808,0.154267112887378,0,0.536546802799238,0,0.16455984991348,0.164167464079095,0,0.292399974850665,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0,0,0.22237804384487,0.570676878337677,0,1.81168850196412,1.50801125280162,0.994782360205754,1.16978452271472,0,0,0,0,0,0,0.610953983535943,0,0.210407459670956,0.948548056863859,1.03327103585722,4.23896565171712,6.91024117962083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0.390267295715598,0,0.221464689648775,0,0.81931657357869,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0,2.81606049676452,0.847328283455281,0.220528398054962,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,5.2551093126331,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.290692833264657,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr11:54722563..54722573,- | |||
}} |
Latest revision as of 02:36, 6 August 2015
Short description: | p@chr11:54722563..54722573, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:54722563..54722573, - |
Coexpression cluster: | MCL_coexpression_mm9:206 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 3.07e-19 | 3 |
striated muscle cell | 3.07e-19 | 3 |
cardiac muscle cell | 3.07e-19 | 3 |
cardiac muscle myoblast | 3.07e-19 | 3 |
muscle precursor cell | 6.30e-10 | 6 |
muscle cell | 6.30e-10 | 6 |
myoblast | 6.30e-10 | 6 |
mesodermal cell | 1.38e-08 | 7 |
multi-potent skeletal muscle stem cell | 8.66e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.10e-09 | 3 |
extraembryonic structure | 1.10e-09 | 3 |
membranous layer | 1.10e-09 | 3 |
urinary system structure | 7.39e-09 | 18 |
renal system | 2.19e-08 | 19 |
uterus or analog | 5.41e-08 | 1 |
amnion | 6.29e-08 | 1 |
kidney | 1.53e-07 | 14 |
kidney mesenchyme | 1.53e-07 | 14 |
upper urinary tract | 1.53e-07 | 14 |
kidney rudiment | 1.53e-07 | 14 |
kidney field | 1.53e-07 | 14 |
embryonic uterus | 1.66e-07 | 4 |
uterus | 1.66e-07 | 4 |
internal genitalia | 4.71e-07 | 9 |
skeletal muscle tissue | 8.66e-07 | 9 |
striated muscle tissue | 8.66e-07 | 9 |
muscle tissue | 8.66e-07 | 9 |
multilaminar epithelium | 8.66e-07 | 9 |
epithelial vesicle | 8.66e-07 | 9 |
musculature | 8.66e-07 | 9 |
somite | 8.66e-07 | 9 |
myotome | 8.66e-07 | 9 |
presomitic mesoderm | 8.66e-07 | 9 |
presumptive segmental plate | 8.66e-07 | 9 |
dermomyotome | 8.66e-07 | 9 |
trunk paraxial mesoderm | 8.66e-07 | 9 |