FFCP PHASE1:Mm9::chr11:57906738..57906759,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:57906738..57906759,+ to FFCP PHASE1:Mm9::chr11:57906738..57906759,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=73 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:57906738..57906759,+ | |||
|description=CAGE_peak_at_chr11:57906738..57906759,+ | |||
|id=chr11:57906738..57906759,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.59e-11!50;CL:0000221!1.44e-08!44;CL:0000133!1.44e-08!44;CL:0002321!1.52e-08!70;CL:0000220!1.52e-08!70;CL:0002319!4.05e-08!43;CL:0000393!5.32e-07!39;CL:0000211!5.32e-07!39;CL:0000107!9.30e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.83e-16,70;CL:0000107,1.90e-12,9;CL:0000723,2.08e-12,91;CL:0000048,2.08e-12,91;CL:0000221,3.21e-11,44;CL:0000133,3.21e-11,44;CL:0000034,5.28e-11,97;CL:0002319,2.06e-10,43;CL:0000219,1.52e-09,54;CL:0002453,2.95e-09,8;CL:0000393,4.64e-09,39;CL:0000211,4.64e-09,39;CL:0000333,5.02e-09,10;CL:0000095,5.02e-09,10;CL:0000243,5.02e-09,10;CL:0000123,5.02e-09,10;CL:0000125,5.02e-09,10;CL:0000030,5.02e-09,10;CL:0000339,5.02e-09,10;CL:0000680,2.46e-08,6;CL:0000187,2.46e-08,6;CL:0000056,2.46e-08,6;CL:0000128,2.51e-07,6;CL:0000126,2.51e-07,6;CL:0000127,2.51e-07,6;CL:0000222,5.29e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.95e-07!11;UBERON:0002410!9.30e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.90e-12,9;UBERON:0000010,5.76e-12,11;UBERON:0005256,7.64e-08,45;UBERON:0002107,1.86e-07,22;UBERON:0007499,1.86e-07,22;UBERON:0006925,1.86e-07,22;UBERON:0009497,1.86e-07,22;UBERON:0000015,1.86e-07,22;UBERON:0002423,1.86e-07,22;UBERON:0006235,1.86e-07,22;UBERON:0008835,1.86e-07,22;UBERON:0003894,1.86e-07,22;UBERON:0004161,1.86e-07,22;UBERON:0008836,1.86e-07,22;UBERON:0009854,5.35e-07,23;UBERON:0009856,5.35e-07,23 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,4.76242424845991,0,0,0.159992422793407,0.91763712426868,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,1.27006134691926,1.23012957516914,0,0,0,0,0,0,0,0,0,0,4.02869817521847,3.14268486780495,6.79122982998222,2.34717403304412,1.30815093828268,1.97717564461025,1.1665793944457,4.89952475688769,7.18762821824858,0,0,0,3.8588915405392,6.5902691185914,2.57836046138721,0,0.528990979272033,0,2.37191172448392,4.4464739805557,5.84934816232909,8.89979726310277,9.9467216092454,3.29560121570245,1.92109152660777,0.311068836925433,0.270011876663381,0.420649922702764,0.571301968807607,1.10434270475807,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.307213066512487,0,0.0914876436024097,0,0.837548997004143,0.56276261003168,0.763991238884051,1.17851434189467,1.56608848879013,1.3047961207771,0.530083353332288,2.41828992341714,0.869593466105033,4.30211938490693,31.2786813505565,78.7966659791213,4.54843492213368,2.24013443548668,20.2239964989723,1.53387290320252,0.779358013808606,1.7666978725517,3.66192891419369,5.13305909657271,7.64415719119937,0,0,0,0,25.4630051773504,0,0.29688427812965,0.346970653532272,0,0.230615497256059,0.452167921657868,0.352766121407114,0.251333182659351,0,0.144599356919912,0.884610551949874,0.970601099684455,0.441683036920787,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0.611036183101898,0.497627882440372,1.0108910337347,0.210441855886474,0.260240885925407,0,0.180062129805349,0.452114453507145,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0.590292695242212,0,0,0.536546802799238,0.233530684734339,0.16455984991348,0.492502392237286,0.243206428637567,0.877199924551994,0.658650345873152,0.939444931322602,0.210289948564127,0,0,0.264450566663544,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.758671603812327,0.456994050438915,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.252946148497029,0.295220295959204,0.627994911365499,0,2.37162101669719,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0.823684239564244,10.0637744569148,3.72140947668503,11.2333562321242,13.3866805311969,10.9432422248366,1.4473305640901,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,1.00503754465089,0.238043640886014,0,0.472905432318573,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,10.5553898757491,7.07077388964322,0,0,0,0,1.96721934452011,1.51482556322624,2.83957397474631,4.29482618726302,3.44677436372478,9.08081432219698,6.01556420022464,6.79383673893198,3.64329631507405,8.18316402151673,8.30104333687699,0,0.851640511249612,0.35613120733451,0,0.659880491890142,0,0,0,0.188605079755898,1.18120757152309,0,0.258428293168221,0.363533729477506,1.42598951353889,0.316036757935816,0,0,0,0.720244376125241,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0.913394847343798,0,0.21183207086382,1.54369878638473,0.16488625294148,0.322928853391811,0.361877549568935,0.119372344003136,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0.559805809294632,0.138199973804424,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.41326727862668,0,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.904118764344118,1.18269287843545,0.704143431874524,0.13020438484395,0.629156066554265,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,2.72076460338254,0,0,0,0.579568782096571,0.563047426353546,2.38097111547445,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.192075457214608,0.34461281373368,0,0.231768651889711,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,0.581385666529314,0.658765662907314,0.0846146078916765,0.182927972872773,0.789209134313529,0.271608227691724,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0,0.499621155875892,0.467863216890817,0.644613162144895,0,1.32354851471709,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,4.76242424845991,0,0,0.159992422793407,0.91763712426868,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,1.27006134691926,1.23012957516914,0,0,0,0,0,0,0,0,0,0,4.02869817521847,3.14268486780495,6.79122982998222,2.34717403304412,1.30815093828268,1.97717564461025,1.1665793944457,4.89952475688769,7.18762821824858,0,0,0,3.8588915405392,6.5902691185914,2.57836046138721,0,0.528990979272033,0,2.37191172448392,4.4464739805557,5.84934816232909,8.89979726310277,9.9467216092454,3.29560121570245,1.92109152660777,0.311068836925433,0.270011876663381,0.420649922702764,0.571301968807607,1.10434270475807,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.307213066512487,0,0.0914876436024097,0,0.837548997004143,0.56276261003168,0.763991238884051,1.17851434189467,1.56608848879013,1.3047961207771,0.530083353332288,2.41828992341714,0.869593466105033,4.30211938490693,31.2786813505565,78.7966659791213,4.54843492213368,2.24013443548668,20.2239964989723,1.53387290320252,0.779358013808606,1.7666978725517,3.66192891419369,5.13305909657271,7.64415719119937,0,0,0,0,25.4630051773504,0,0.29688427812965,0.346970653532272,0,0.230615497256059,0.452167921657868,0.352766121407114,0.251333182659351,0,0.144599356919912,0.884610551949874,0.970601099684455,0.441683036920787,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0.611036183101898,0.497627882440372,1.0108910337347,0.210441855886474,0.260240885925407,0,0.180062129805349,0.452114453507145,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0.590292695242212,0,0,0.536546802799238,0.233530684734339,0.16455984991348,0.492502392237286,0.243206428637567,0.877199924551994,0.658650345873152,0.939444931322602,0.210289948564127,0,0,0.264450566663544,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0.380451252225118,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.758671603812327,0.456994050438915,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.252946148497029,0.295220295959204,0.627994911365499,0,2.37162101669719,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0.823684239564244,10.0637744569148,3.72140947668503,11.2333562321242,13.3866805311969,10.9432422248366,1.4473305640901,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,1.00503754465089,0.238043640886014,0,0.472905432318573,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,10.5553898757491,7.07077388964322,0,0,0,0,1.96721934452011,1.51482556322624,2.83957397474631,4.29482618726302,3.44677436372478,9.08081432219698,6.01556420022464,6.79383673893198,3.64329631507405,8.18316402151673,8.30104333687699,0,0.851640511249612,0.35613120733451,0,0.659880491890142,0,0,0,0.188605079755898,1.18120757152309,0,0.258428293168221,0.363533729477506,1.42598951353889,0.316036757935816,0,0,0,0.720244376125241,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0.913394847343798,0,0.21183207086382,1.54369878638473,0.16488625294148,0.322928853391811,0.361877549568935,0.119372344003136,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0.559805809294632,0.138199973804424,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.41326727862668,0,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.904118764344118,1.18269287843545,0.704143431874524,0.13020438484395,0.629156066554265,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,2.72076460338254,0,0,0,0.579568782096571,0.563047426353546,2.38097111547445,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0.25347929989024,0.377252682772152,0.561849044819294,0.192075457214608,0.34461281373368,0,0.231768651889711,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.715308569841963,0.581385666529314,0.658765662907314,0.0846146078916765,0.182927972872773,0.789209134313529,0.271608227691724,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0,0.499621155875892,0.467863216890817,0.644613162144895,0,1.32354851471709,0.463735671240843 | ||
|short_description=p@chr11:57906738..57906759,+ | |||
}} | }} |
Latest revision as of 03:47, 6 August 2015
Short description: | p@chr11:57906738..57906759, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:57906738..57906759, + |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.83e-16 | 70 |
autonomic neuron | 1.90e-12 | 9 |
somatic stem cell | 2.08e-12 | 91 |
multi fate stem cell | 2.08e-12 | 91 |
ectodermal cell | 3.21e-11 | 44 |
neurectodermal cell | 3.21e-11 | 44 |
stem cell | 5.28e-11 | 97 |
neural cell | 2.06e-10 | 43 |
motile cell | 1.52e-09 | 54 |
oligodendrocyte precursor cell | 2.95e-09 | 8 |
electrically responsive cell | 4.64e-09 | 39 |
electrically active cell | 4.64e-09 | 39 |
migratory neural crest cell | 5.02e-09 | 10 |
neuron associated cell | 5.02e-09 | 10 |
glial cell (sensu Vertebrata) | 5.02e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 5.02e-09 | 10 |
glial cell | 5.02e-09 | 10 |
glioblast | 5.02e-09 | 10 |
glioblast (sensu Vertebrata) | 5.02e-09 | 10 |
muscle precursor cell | 2.46e-08 | 6 |
muscle cell | 2.46e-08 | 6 |
myoblast | 2.46e-08 | 6 |
oligodendrocyte | 2.51e-07 | 6 |
macroglial cell | 2.51e-07 | 6 |
astrocyte | 2.51e-07 | 6 |
mesodermal cell | 5.29e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.90e-12 | 9 |
peripheral nervous system | 5.76e-12 | 11 |
trunk mesenchyme | 7.64e-08 | 45 |
liver | 1.86e-07 | 22 |
epithelial sac | 1.86e-07 | 22 |
digestive gland | 1.86e-07 | 22 |
epithelium of foregut-midgut junction | 1.86e-07 | 22 |
anatomical boundary | 1.86e-07 | 22 |
hepatobiliary system | 1.86e-07 | 22 |
foregut-midgut junction | 1.86e-07 | 22 |
hepatic diverticulum | 1.86e-07 | 22 |
liver primordium | 1.86e-07 | 22 |
septum transversum | 1.86e-07 | 22 |
liver bud | 1.86e-07 | 22 |
digestive tract diverticulum | 5.35e-07 | 23 |
sac | 5.35e-07 | 23 |