FFCP PHASE1:Mm9::chr5:135421686..135421706,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:135421686..135421706,- | |||
|description=CAGE_peak_at_chr5:135421686..135421706,- | |||
|id=chr5:135421686..135421706,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.49e-13,3;CL:0002202,1.49e-13,3;CL:0000069,1.49e-13,3;CL:0002632,1.49e-13,3;CL:0002368,1.49e-13,3;CL:0000307,1.49e-13,3;CL:0000377,1.49e-13,3;CL:0000349,3.30e-12,3;CL:0000351,3.30e-12,3;CL:0000682,4.69e-12,3;CL:0000066,3.88e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.28e-09!43;UBERON:0005409!2.69e-08!59;UBERON:0004119!3.63e-07!130;UBERON:0000925!3.63e-07!130;UBERON:0006595!3.63e-07!130;UBERON:0001007!7.70e-07!128;UBERON:0001555!7.70e-07!128;UBERON:0007026!7.70e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.49e-13,3;UBERON:0001005,1.49e-13,3;UBERON:0007196,1.49e-13,3;UBERON:0001558,1.49e-13,3;UBERON:0000331,1.62e-12,3;UBERON:0002116,1.62e-12,3;UBERON:0001204,1.62e-12,3;UBERON:0001168,1.62e-12,3;UBERON:0000344,2.20e-12,15;UBERON:0000358,3.30e-12,3;UBERON:0000307,3.30e-12,3;UBERON:0007010,3.30e-12,3;UBERON:0004923,3.82e-12,24;UBERON:0002108,1.65e-09,4;UBERON:0001962,2.19e-09,2;UBERON:0001961,2.19e-09,2;UBERON:0001744,2.19e-09,2;UBERON:0007023,7.25e-09,51;UBERON:0010147,3.82e-08,2;UBERON:0003937,3.82e-08,2;UBERON:0005399,3.82e-08,2;UBERON:0001242,1.90e-07,13;UBERON:0001262,1.90e-07,13;UBERON:0004786,1.90e-07,13 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.671517087647559,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,9.1763712426868,1.14846392823004,2.15380998079537,2.37018355954478,4.94060890586572,1.26015064879965,3.99114919179548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,22.5150682651663,20.0154293725328,17.1878311305026,0.11418387971906,0,0,0,0,0,0,0,0,3.21353458054686,0,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.505445516867349,0.210441855886474,0,0,0.180062129805349,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,0.264450566663544,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,1.1937388322469,0.38992817423824,0,0,0.597423819763102,0.569003702859245,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,0.516856586336442,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,1.69465656691056,1.10264199027481,0.16488625294148,0.161464426695906,0.0603129249281559,0.596861720015682,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0.169978429993855,0,0.414599921413271,0.954670618015114,0,0.406638934253697,0,0.627264888043406,0,0,0,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0,0.0762068066549998,0.100826185136841,0,0,0,0,1.77588762699252,2.15313255862742,2.18250001273302,1.15913756419314,0,0.36630324853453,0.214368379079066,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0.500895729946347,0.671517087647559,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,9.1763712426868,1.14846392823004,2.15380998079537,2.37018355954478,4.94060890586572,1.26015064879965,3.99114919179548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,22.5150682651663,20.0154293725328,17.1878311305026,0.11418387971906,0,0,0,0,0,0,0,0,3.21353458054686,0,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.505445516867349,0.210441855886474,0,0,0.180062129805349,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,0.264450566663544,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,1.1937388322469,0.38992817423824,0,0,0.597423819763102,0.569003702859245,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,0.516856586336442,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,1.69465656691056,1.10264199027481,0.16488625294148,0.161464426695906,0.0603129249281559,0.596861720015682,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0.169978429993855,0,0.414599921413271,0.954670618015114,0,0.406638934253697,0,0.627264888043406,0,0,0,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0,0.0762068066549998,0.100826185136841,0,0,0,0,1.77588762699252,2.15313255862742,2.18250001273302,1.15913756419314,0,0.36630324853453,0.214368379079066,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr5:135421686..135421706,- | |||
}} | }} |
Latest revision as of 09:58, 6 August 2015
Short description: | p@chr5:135421686..135421706, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:135421686..135421706, - |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.49e-13 | 3 |
epithelial cell of tracheobronchial tree | 1.49e-13 | 3 |
branched duct epithelial cell | 1.49e-13 | 3 |
epithelial cell of lower respiratory tract | 1.49e-13 | 3 |
respiratory epithelial cell | 1.49e-13 | 3 |
tracheal epithelial cell | 1.49e-13 | 3 |
tracheoblast | 1.49e-13 | 3 |
extraembryonic cell | 3.30e-12 | 3 |
trophoblast cell | 3.30e-12 | 3 |
M cell of gut | 4.69e-12 | 3 |
epithelial cell | 3.88e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.49e-13 | 3 |
respiratory airway | 1.49e-13 | 3 |
tracheobronchial tree | 1.49e-13 | 3 |
lower respiratory tract | 1.49e-13 | 3 |
ileal mucosa | 1.62e-12 | 3 |
ileum | 1.62e-12 | 3 |
mucosa of small intestine | 1.62e-12 | 3 |
wall of small intestine | 1.62e-12 | 3 |
mucosa | 2.20e-12 | 15 |
blastocyst | 3.30e-12 | 3 |
blastula | 3.30e-12 | 3 |
cleaving embryo | 3.30e-12 | 3 |
organ component layer | 3.82e-12 | 24 |
small intestine | 1.65e-09 | 4 |
gut-associated lymphoid tissue | 2.19e-09 | 2 |
mucosa-associated lymphoid tissue | 2.19e-09 | 2 |
lymphoid tissue | 2.19e-09 | 2 |
adult organism | 7.25e-09 | 51 |
male accessory sex gland | 3.82e-08 | 2 |
sex gland | 3.82e-08 | 2 |
male reproductive gland | 3.82e-08 | 2 |
intestinal mucosa | 1.90e-07 | 13 |
wall of intestine | 1.90e-07 | 13 |
gastrointestinal system mucosa | 1.90e-07 | 13 |