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FFCP PHASE1:Mm9::chr19:24299505..24299523,-: Difference between revisions

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{{FFCP|EntrezGene=21873|HGNC=|MCL_coexpression_id=2253|UniProt=Q9Z0U1|association_with_transcript=0bp_to_NM_011597,uc008ham.2_5end|description=CAGE_peak_2_at_Tjp2_5end|id=chr19:24299505..24299523,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,4.62e-07,25;CL:0002563,6.50e-07,9;CL:0002251,6.50e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!8.14e-22!130;UBERON:0000925!8.14e-22!130;UBERON:0006595!8.14e-22!130;UBERON:0001007!4.62e-21!128;UBERON:0001555!4.62e-21!128;UBERON:0007026!4.62e-21!128;UBERON:0004921!6.24e-20!126;UBERON:0004185!6.24e-20!126;UBERON:0000160!1.33e-19!43;UBERON:0005409!1.60e-19!59;UBERON:0000344!3.58e-10!15;UBERON:0001242!3.85e-09!13;UBERON:0000060!3.85e-09!13;UBERON:0001262!3.85e-09!13;UBERON:0004786!3.85e-09!13;UBERON:0000466!8.09e-09!79;UBERON:0005178!1.31e-08!17;UBERON:0005181!1.31e-08!17;UBERON:0002224!1.31e-08!17;UBERON:0000915!1.31e-08!17;UBERON:0008947!1.31e-08!17;UBERON:0003258!1.31e-08!17;UBERON:0005153!1.10e-07!17;UBERON:0000481!1.30e-07!230;UBERON:0000464!1.32e-07!57;UBERON:0002048!5.41e-07!14;UBERON:0000117!5.41e-07!14;UBERON:0000171!5.41e-07!14;UBERON:0000170!5.41e-07!14;UBERON:0005597!5.41e-07!14;UBERON:0000118!5.41e-07!14;UBERON:0000077!6.43e-07!97;UBERON:0004923!6.57e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.09e-19,118;UBERON:0000925,7.09e-19,118;UBERON:0006595,7.09e-19,118;UBERON:0001007,3.73e-18,116;UBERON:0001555,3.73e-18,116;UBERON:0007026,3.73e-18,116;UBERON:0000160,6.93e-18,31;UBERON:0004921,4.56e-17,114;UBERON:0005409,1.15e-16,47;UBERON:0000344,1.21e-10,15;UBERON:0001242,1.48e-09,13;UBERON:0001262,1.48e-09,13;UBERON:0004786,1.48e-09,13;UBERON:0005178,5.38e-09,17;UBERON:0005181,5.38e-09,17;UBERON:0002224,5.38e-09,17;UBERON:0000915,5.38e-09,17;UBERON:0008947,5.38e-09,17;UBERON:0003258,5.38e-09,17;UBERON:0005177,2.80e-08,79;UBERON:0005153,5.10e-08,17;UBERON:0002048,2.72e-07,14;UBERON:0000117,2.72e-07,14;UBERON:0000171,2.72e-07,14;UBERON:0000170,2.72e-07,14;UBERON:0005597,2.72e-07,14;UBERON:0000118,2.72e-07,14;UBERON:0003350,6.50e-07,9;UBERON:0004808,6.50e-07,9;UBERON:0001277,6.50e-07,9;UBERON:0004923,8.87e-07,24|phase1_expression=0.480446541314382,73.2848356042658,83.7198600476746,63.8199485857411,60.1074875935617,40.9625423465011,36.443571932902,0.387369970324729,0.281577444303333,0,0,0,0,0.0874204024189974,0.666219523631325,0,0,0,0.137114433605739,0,9.09963204616447,0.595745707205312,0,25.1188103785648,25.693839479523,53.4035726626969,40.491627638953,38.78482188346,28.6935363379125,34.0240675175907,37.6941868114018,0,0,0,19.6419101430867,14.7948834369058,18.1710727073509,0,0,0.523523743973798,0,0,0,0,0.101376931219515,0,0,2.61630187656536,3.29529274101708,2.3331587888914,1.95980990275508,1.43752564364972,0.671130424230945,2.17608642603403,0.336093799142464,1.02903774414379,0,0,0.606949382578793,0,0,0.338844532069132,0,0,0,0,0.898800331555214,1.15265491596466,0.311068836925433,0.270011876663381,0.630974884054146,0.285650984403804,0,0.367472397644862,0.0958454710182364,0,0,0.893811366596314,0.46081959976873,0.131886287730194,0.274462930807229,0,0.837548997004143,1.12552522006336,0.30559649555362,0.294628585473668,0.569486723196412,0,1.13589289999776,0.755715601067855,18.8411917656091,5.16254326188832,21.0791113449403,4.31762553310254,1.94932925234301,3.13618820968135,4.0728881838208,0,0,0,2.11265129665021,0,0,0,22.9480503471887,26.6027858748854,30.8369911459018,8.90634261808668,0.776813650941515,0.148442139064825,0.867426633830679,0.608930956624282,1.38369298353635,0.452167921657868,0.705532242814229,0.376999773989026,57.1020375466404,1.3013942122792,0.884610551949874,0.161766849947409,0.883366073841574,0.484875253135222,26.0948465705371,0,0.41889341362691,24.2684202448162,0.599075622529601,0,1.14363204365758,0.898743836428936,0,0.251308704225729,0.173824320192276,0.511430914660661,0.83115217823824,0.811206315338788,3.86989582631202,4.47865094196335,15.9215337813215,7.99679052368601,1.30120442962704,0.919608417733892,0.360124259610698,0.753524089178575,0.680364991513279,0.896796041993948,1.3118241438362,2.58703370739016,1.07783996466421,0.567318240503458,0.527853372491847,1.31517439456545,1.11218899690239,0.348252166522167,0.823128545631774,2.38841120182192,0,0.51469581422943,0,1.65700618028402,1.40715635988658,1.98068267607116,3.55117103377815,1.77087808572663,2.00547246753592,2.32533944750408,2.14618721119695,1.86824547787471,2.79751744852917,3.94001913789829,2.99954595319666,3.50879969820798,2.85415149878366,3.89198614405078,0.420579897128254,0.617427674275707,52.2061677114401,27.2384083663451,1.91959425481711,6.96710015581316,16.8816374331942,21.176770085451,21.5706702529524,22.2563982551694,27.0481565080372,21.7402620235694,19.1014758688205,19.4977342600328,20.8611573217459,27.8634016682809,27.8818084338356,31.46432117419,3.03468641524931,3.19895835307241,9.01661885384643,3.25842124552503,4.07300223052014,4.20814919341911,4.67950374719504,2.21415221969403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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:21873
|HGNC=
|MCL_coexpression_id=2253
|TSSclassifier=NA
|UniProt=uniprot:Q9Z0U1
|association_with_transcript=0bp_to_NM_011597,uc008ham.2_5end
|cluster_id=chr19:24299505..24299523,-
|description=CAGE_peak_2_at_Tjp2_5end
|id=chr19:24299505..24299523,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,4.62e-07,25;CL:0002563,6.50e-07,9;CL:0002251,6.50e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!8.14e-22!130;UBERON:0000925!8.14e-22!130;UBERON:0006595!8.14e-22!130;UBERON:0001007!4.62e-21!128;UBERON:0001555!4.62e-21!128;UBERON:0007026!4.62e-21!128;UBERON:0004921!6.24e-20!126;UBERON:0004185!6.24e-20!126;UBERON:0000160!1.33e-19!43;UBERON:0005409!1.60e-19!59;UBERON:0000344!3.58e-10!15;UBERON:0001242!3.85e-09!13;UBERON:0000060!3.85e-09!13;UBERON:0001262!3.85e-09!13;UBERON:0004786!3.85e-09!13;UBERON:0000466!8.09e-09!79;UBERON:0005178!1.31e-08!17;UBERON:0005181!1.31e-08!17;UBERON:0002224!1.31e-08!17;UBERON:0000915!1.31e-08!17;UBERON:0008947!1.31e-08!17;UBERON:0003258!1.31e-08!17;UBERON:0005153!1.10e-07!17;UBERON:0000481!1.30e-07!230;UBERON:0000464!1.32e-07!57;UBERON:0002048!5.41e-07!14;UBERON:0000117!5.41e-07!14;UBERON:0000171!5.41e-07!14;UBERON:0000170!5.41e-07!14;UBERON:0005597!5.41e-07!14;UBERON:0000118!5.41e-07!14;UBERON:0000077!6.43e-07!97;UBERON:0004923!6.57e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.09e-19,118;UBERON:0000925,7.09e-19,118;UBERON:0006595,7.09e-19,118;UBERON:0001007,3.73e-18,116;UBERON:0001555,3.73e-18,116;UBERON:0007026,3.73e-18,116;UBERON:0000160,6.93e-18,31;UBERON:0004921,4.56e-17,114;UBERON:0005409,1.15e-16,47;UBERON:0000344,1.21e-10,15;UBERON:0001242,1.48e-09,13;UBERON:0001262,1.48e-09,13;UBERON:0004786,1.48e-09,13;UBERON:0005178,5.38e-09,17;UBERON:0005181,5.38e-09,17;UBERON:0002224,5.38e-09,17;UBERON:0000915,5.38e-09,17;UBERON:0008947,5.38e-09,17;UBERON:0003258,5.38e-09,17;UBERON:0005177,2.80e-08,79;UBERON:0005153,5.10e-08,17;UBERON:0002048,2.72e-07,14;UBERON:0000117,2.72e-07,14;UBERON:0000171,2.72e-07,14;UBERON:0000170,2.72e-07,14;UBERON:0005597,2.72e-07,14;UBERON:0000118,2.72e-07,14;UBERON:0003350,6.50e-07,9;UBERON:0004808,6.50e-07,9;UBERON:0001277,6.50e-07,9;UBERON:0004923,8.87e-07,24
|phase1_expression=0.480446541314382,73.2848356042658,83.7198600476746,63.8199485857411,60.1074875935617,40.9625423465011,36.443571932902,0.387369970324729,0.281577444303333,0,0,0,0,0.0874204024189974,0.666219523631325,0,0,0,0.137114433605739,0,9.09963204616447,0.595745707205312,0,25.1188103785648,25.693839479523,53.4035726626969,40.491627638953,38.78482188346,28.6935363379125,34.0240675175907,37.6941868114018,0,0,0,19.6419101430867,14.7948834369058,18.1710727073509,0,0,0.523523743973798,0,0,0,0,0.101376931219515,0,0,2.61630187656536,3.29529274101708,2.3331587888914,1.95980990275508,1.43752564364972,0.671130424230945,2.17608642603403,0.336093799142464,1.02903774414379,0,0,0.606949382578793,0,0,0.338844532069132,0,0,0,0,0.898800331555214,1.15265491596466,0.311068836925433,0.270011876663381,0.630974884054146,0.285650984403804,0,0.367472397644862,0.0958454710182364,0,0,0.893811366596314,0.46081959976873,0.131886287730194,0.274462930807229,0,0.837548997004143,1.12552522006336,0.30559649555362,0.294628585473668,0.569486723196412,0,1.13589289999776,0.755715601067855,18.8411917656091,5.16254326188832,21.0791113449403,4.31762553310254,1.94932925234301,3.13618820968135,4.0728881838208,0,0,0,2.11265129665021,0,0,0,22.9480503471887,26.6027858748854,30.8369911459018,8.90634261808668,0.776813650941515,0.148442139064825,0.867426633830679,0.608930956624282,1.38369298353635,0.452167921657868,0.705532242814229,0.376999773989026,57.1020375466404,1.3013942122792,0.884610551949874,0.161766849947409,0.883366073841574,0.484875253135222,26.0948465705371,0,0.41889341362691,24.2684202448162,0.599075622529601,0,1.14363204365758,0.898743836428936,0,0.251308704225729,0.173824320192276,0.511430914660661,0.83115217823824,0.811206315338788,3.86989582631202,4.47865094196335,15.9215337813215,7.99679052368601,1.30120442962704,0.919608417733892,0.360124259610698,0.753524089178575,0.680364991513279,0.896796041993948,1.3118241438362,2.58703370739016,1.07783996466421,0.567318240503458,0.527853372491847,1.31517439456545,1.11218899690239,0.348252166522167,0.823128545631774,2.38841120182192,0,0.51469581422943,0,1.65700618028402,1.40715635988658,1.98068267607116,3.55117103377815,1.77087808572663,2.00547246753592,2.32533944750408,2.14618721119695,1.86824547787471,2.79751744852917,3.94001913789829,2.99954595319666,3.50879969820798,2.85415149878366,3.89198614405078,0.420579897128254,0.617427674275707,52.2061677114401,27.2384083663451,1.91959425481711,6.96710015581316,16.8816374331942,21.176770085451,21.5706702529524,22.2563982551694,27.0481565080372,21.7402620235694,19.1014758688205,19.4977342600328,20.8611573217459,27.8634016682809,27.8818084338356,31.46432117419,3.03468641524931,3.19895835307241,9.01661885384643,3.25842124552503,4.07300223052014,4.20814919341911,4.67950374719504,2.21415221969403,4.23896565171712,2.71473760627961,2.66807364378434,1.83529616287703,2.35870794135844,1.57403478669398,2.43432145666204,1.68824011826692,2.80088436959562,2.01387296215567,2.7562988551756,1.09824565275233,2.87536413054709,1.86070473834252,5.92871578917665,4.2938409251009,4.66433275156972,4.3419916922703,29.5605104266567,2.65287976478679,6.02970412835496,5.09235257325564,7.97946844180907,18.2581820611579,22.1380586023993,26.9284434043762,22.3841904630791,23.4752571027701,26.7884011344578,25.5626770956551,25.9027472798843,35.2943702938888,0,0,6.88469982226651,4.69092468718045,1.12385412991454,1.17211686592203,0,1.00988370881749,0,0,0,0.238968797952552,0,0,0.809621403349789,0,0,0.321321316421807,4.68402281187286,1.95872164033981,2.76907830901079,13.1976098378028,5.30980553359851,6.31229654002952,7.55808892411878,5.84675747243284,2.95301892880773,7.07100840271033,10.0787034335606,5.81653967164009,5.70395805415554,5.68866164284469,4.21674434299995,6.18813259489121,2.38307724027652,2.88097750450096,3.88076051348264,4.92975180572662,2.83744373827638,3.0322698992352,2.13913726782757,3.65357938937519,5.16277757740163,9.10877904714427,8.15955072803359,1.6488625294148,0.807322133479528,0.784068024066026,0.954978752025092,1.64140899745061,25.358832786797,0.927126510052548,0.341741761595705,2.68302928352189,0.555583582109135,0.376736914009382,0.410082683163076,0.457556346413045,2.54967644990783,2.23922323717853,1.93479963326193,22.9120948323627,5.3777118908793,6.50622294805916,12.9606408986162,10.0362382086945,12.2283035697859,9.97996163247673,14.2163943847578,18.3229159388821,27.3487593645683,14.9121435140862,0,3.28936401296753,2.31641886639937,1.55560950675238,2.19571699912143,2.02747350588934,2.34714477291508,2.47388331203505,1.25831213310853,0.483168241652012,0.288030006257865,0.316011120628178,3.64905387522296,3.28675062927447,3.37794139742267,2.32734704367726,1.98681354781265,1.80293174279953,1.32920574457119,1.41353029927407,0.990688486514998,0.604957110821043,0.682205165178267,0.481059208201647,0.350630706544707,2.0405734525369,14.4290869693142,21.7107532994931,6.37961542183498,16.0347363046718,5.44279178808428,17.2162526811229,10.0753138167161,18.0565957452731,0,0.460325236507177,0.572895513439397,0.171853182343688,0,1.5107877947794,0,0,0.453142408984205,0,1.03787347584177,0.798049746802062,0.170733605754134,1.70174701947806,3.14419743941973,3.8607136774503,4.00044110042907,2.67845574410562,2.56735367673452,3.79045817645696,4.05566879824384,3.58390048633545,3.37109426891577,3.07320731543373,2.81433797882505,2.38146845641537,3.1288768005111,4.62982129112892,3.29668720642645,2.79677948255355,4.4573002810104,1.59728225543404,2.62279808942053,2.90692833264657,4.42314087952054,4.73841804193388,2.92684756596436,1.57841826862706,4.34573164306758,4.48913817326191,4.1522256343461,3.54616136552028,1.22769312950907,2.78886314134739,2.50778594275484,0.749431733813838,3.04111090979031,5.15690529715916,0.956441660344217,0.882365676478062,1.62307484934295
|short_description=p2@Tjp2
}}

Revision as of 10:16, 6 August 2015

Short description:p2@Tjp2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Tjp2_5end
Coexpression cluster:MCL_coexpression_mm9:2253
Association with transcript: 0bp_to_NM_011597, uc008ham.2_5end
EntrezGene:21873
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Tjp2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I573.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I683.72
CD326+ enterocyte, pool1.CNhs13542.11848-124I363.82
CD326+ enterocyte, pool2.CNhs13197.11849-124I460.11
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I740.96
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I836.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D125.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.69
GP2+ M cell, pool1.CNhs13228.11845-124H953.40
GP2+ M cell, pool2.CNhs13231.11846-124I140.49
GP2+ M cell, pool3.CNhs13240.11847-124I238.78
Ileum epithelium, pool1.CNhs13199.10252-104B928.69
Ileum epithelium, pool2.CNhs13232.10253-104C134.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C837.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F519.64
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.79
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.17
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.84
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C421.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G122.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G226.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G330.84
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A857.10
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H724.27
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.48
epididymis, adult.CNhs10490.58-23B215.92
eyeball, adult.CNhs10484.31-12G48.00
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G13.94
heart, neonate N16.CNhs11209.782-15G13.00
heart, neonate N20.CNhs11127.821-26I63.51
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D23.89
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I352.21
intestine, adult.CNhs10496.178-9A327.24
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D56.97
intestine, embryo E15.CNhs10602.976-16D816.88
intestine, embryo E16.CNhs10585.463-22H421.18
intestine, embryo E17.CNhs10582.482-18D321.57
intestine, embryo E18.CNhs10526.1289-20F722.26
intestine, neonate N00.CNhs11126.644-26D127.05
intestine, neonate N01.CNhs11192.1322-23E921.74
intestine, neonate N06.CNhs11102.688-20B819.10
intestine, neonate N07.CNhs11095.720-20F219.50
intestine, neonate N10.CNhs11098.755-23A520.86
intestine, neonate N20.CNhs11187.827-18D127.86
intestine, neonate N25.CNhs11121.1352-25E327.88
intestine, neonate N30.CNhs11131.1384-42G131.46
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F83.20
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G74.21
kidney, neonate N10.CNhs11206.758-6D54.68
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F34.24
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H14.66
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B129.56
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F86.03
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B67.98
lung, embryo E17.CNhs10605.480-44A618.26
lung, embryo E18.CNhs10583.1287-20I622.14
lung, neonate N00.CNhs11224.640-42C626.93
lung, neonate N06.CNhs11212.683-20E522.38
lung, neonate N07.CNhs11111.715-19A323.48
lung, neonate N10.CNhs11219.750-23E626.79
lung, neonate N20.CNhs11109.822-18A425.56
lung, neonate N25.CNhs11119.1359-25C725.90
lung, neonate N30.CNhs11133.1394-42H235.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H24.69
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G613.20
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F27.56
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G910.08
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C73.88
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G39.11
prostate, adult.CNhs10470.859-1F88.16
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I125.36
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H622.91
stomach, embryo E12.CNhs10588.356-43E35.38
stomach, embryo E15.CNhs10603.1252-16G86.51
stomach, embryo E16.CNhs11022.459-17D412.96
stomach, embryo E17.CNhs11006.1035-18D510.04
stomach, embryo E18.CNhs10999.1286-20C612.23
stomach, neonate N03.CNhs11193.1340-24B89.98
stomach, neonate N07.CNhs11210.718-18A914.22
stomach, neonate N25.CNhs11104.1355-25E418.32
stomach, neonate N30.CNhs11134.1386-42I127.35
submandibular gland, adult.CNhs10469.59-29C114.91
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I23.29
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H314.43
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F721.71
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.38
urinary bladder, adult.CNhs10481.879-12E416.03
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E517.22
vagina, adult.CNhs10502.89-27D510.08
vesicular gland, adult.CNhs10491.51-27F818.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell4.62e-0725
intestinal epithelial cell6.50e-079
epithelial cell of alimentary canal6.50e-079

Uber anatomy
Ontology termp-valuen
endoderm-derived structure7.09e-19118
endoderm7.09e-19118
presumptive endoderm7.09e-19118
digestive system3.73e-18116
digestive tract3.73e-18116
primitive gut3.73e-18116
intestine6.93e-1831
subdivision of digestive tract4.56e-17114
gastrointestinal system1.15e-1647
mucosa1.21e-1015
intestinal mucosa1.48e-0913
wall of intestine1.48e-0913
gastrointestinal system mucosa1.48e-0913
thoracic cavity element5.38e-0917
thoracic segment organ5.38e-0917
thoracic cavity5.38e-0917
thoracic segment of trunk5.38e-0917
respiratory primordium5.38e-0917
endoderm of foregut5.38e-0917
trunk region element2.80e-0879
epithelial bud5.10e-0817
lung2.72e-0714
respiratory tube2.72e-0714
respiration organ2.72e-0714
pair of lungs2.72e-0714
lung primordium2.72e-0714
lung bud2.72e-0714
epithelium of mucosa6.50e-079
gastrointestinal system epithelium6.50e-079
intestinal epithelium6.50e-079
organ component layer8.87e-0724
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