FFCP PHASE1:Hg19::chrX:48327744..48327785,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92745 | |EntrezGene=92745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18070 | |HGNC=18070 | ||
|TSSclassifier=strong | |||
|UniProt=C9JMY2 | |UniProt=C9JMY2 | ||
|association_with_transcript=-339bp_to_ENST00000416711_5end | |association_with_transcript=-339bp_to_ENST00000416711_5end | ||
|cluster_id=chrX:48327744..48327785,- | |||
|description=CAGE_peak_5_at_SLC38A5_5end | |description=CAGE_peak_5_at_SLC38A5_5end | ||
|id=chrX:48327744..48327785,- | |id=chrX:48327744..48327785,- | ||
|ontology_enrichment_celltype=CL:0000542!3.95e-07!53;CL:0000051!3.95e-07!53;CL:0002368!7.93e-07!13;CL:0000838!9.27e-07!52 | |ontology_enrichment_celltype=CL:0000542!3.95e-07!53;CL:0000051!3.95e-07!53;CL:0002368!7.93e-07!13;CL:0000838!9.27e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.17e-09;13!CL:0002159;8.13e-09;14!CL:0002076;2.39e-07;42 | |ontology_enrichment_celltype_v019=CL:0002368;3.17e-09;13!CL:0002159;8.13e-09;14!CL:0002076;2.39e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.46e-09,13;CL:0002076,4.17e-09,42;CL:0002159,7.34e-09,14 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!2.77e-12!51;DOID:0060083!2.77e-12!51;DOID:1240!9.70e-11!39;DOID:8692!3.72e-08!31 | |ontology_enrichment_disease=DOID:2531!2.77e-12!51;DOID:0060083!2.77e-12!51;DOID:1240!9.70e-11!39;DOID:8692!3.72e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.32e-07;39!DOID:2531;2.33e-07;51!DOID:0060083;2.33e-07;51!DOID:1036;6.83e-07;8!DOID:8692;7.29e-07;31 | |ontology_enrichment_disease_v019=DOID:1240;1.32e-07;39!DOID:2531;2.33e-07;51!DOID:0060083;2.33e-07;51!DOID:1036;6.83e-07;8!DOID:8692;7.29e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,2.12e-12,51;DOID:0060083,2.12e-12,51;DOID:1240,1.04e-09,39;DOID:8692,2.86e-07,31;DOID:1036,4.48e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.73e-08!72;UBERON:0000065!2.04e-07!53;UBERON:0001557!2.28e-07!19 | |ontology_enrichment_uberon=UBERON:0001004!2.73e-08!72;UBERON:0000065!2.04e-07!53;UBERON:0001557!2.28e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.82e-08;9!UBERON:0001557;5.82e-08;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;5.82e-08;9!UBERON:0001557;5.82e-08;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,4.79e-10,74;UBERON:0000065,1.26e-08,54;UBERON:0001737,4.83e-08,9;UBERON:0004119,3.08e-07,160;UBERON:0000925,3.08e-07,160;UBERON:0006595,3.08e-07,160;UBERON:0000072,3.09e-07,47;UBERON:0001557,9.01e-07,19 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,1.72013755551056,8.37361401566913,0.436882744260345,0,0.247532705920093,0.331397375727916,0,0,0.730310090387373,0,0.738726348460727,0.612002073732759,0,0,1.23186982565596,0.376627918784408,1.14620108621927,1.23150884174919,1.41679406364623,0.393364276848904,0.383829398097213,0,9.19421224478927,14.457884101356,7.76483421350254,2.63388481973026,3.9807385096478,2.93600439334847,0,0.200544447470142,0,0,0,0,0.290796477559129,0.755751887377619,0.242584061187816,0,0,0,0.575384784644301,0.512321413058201,0.709446689665756,0,0,0,0,0.272906150057846,0,0,0,0,0.989553900560148,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0,0,0.434377689410233,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,2.66852776159066,0.426730222566507,0.400395987036012,0,1.32208974556972,0,0,0,0,0,1.12101712596307,2.10707267820062,0.786839080455332,1.17903228824749,0.822405995998037,0.83593247695339,0.651844533267181,0,0,1.22551502573691,0.589211814949674,0.886135578334485,0.812411591295047,0.640456598628376,2.08094956095805,1.47994114143309,0.829050053357545,0.579606171470105,0.14828656316206,0.267540828089713,0,1.81294948316106,0.766440987203842,1.03088233644789,1.01207876807801,0.95569624297229,1.95325036156926,0,0.903450714466637,0.639933055772092,1.24930726552346,0.473554504088034,0,1.00803371612366,0.802320587350522,0.289648807765598,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0,0,2.43317435151318,0.472674085820339,0.665188192387692,0.175669571386252,0.72038491523742,5.82872461268068,7.78647329847302,0,0,0,0.238490624305342,1.71598473234038,1.11437250398869,0.198762407366705,1.72046919021225,0,0,0.838998872419812,1.6507082516404,0.417989933073621,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.892997282840798,0.44905874525234,0.675668882899933,1.53316637465883,0.949265659568129,0,0,0,6.54141078213801,4.47274756525787,0.633152558322899,0.132409180813219,0.573673241497627,0,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0,0,0,0.70296429550139,0,2.2818872861778,0.448346041655403,0.23486899728753,0,0,0.61246251376468,1.22834317311768,0.206651562351531,1.18800285728205,0,0,0,0.336672227908132,0.375355559615893,0.277064115484183,1.31693286264251,0.612975591598039,0.600952235626387,0.680593098960126,0,0.213557388818567,0,0,0,0.257640540045629,0,0.843881661206331,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0,0,19.7126070226563,16.6375133560409,16.3478619371732,2.19552671033272,2.65059536642971,3.95059405756363,1.65857688024593,4.28945446488568,2.18986415445498,0,0,0,0,0,2.9576700009961,3.37169380156203,5.06123162755312,2.75734931830985,3.26819166138609,4.27087114399974,4.1797705529651,2.94332197688019,3.8474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,17.4502953799715,22.4803506515239,5.93120937228622,6.29601427078001,0,1.03993478527958,0,0,0.234817388471643,0,0,0,0,0,0,0,0,25.3081351764298,20.325837512062,14.4610599187234,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,1.04007436911366,2.31486636835928,0,1.3321108950805,0,1.08524321078289,0.823240336780769,0,0,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,3.13838403181876,0,0.431255149719035,0.513372145118994,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0,0,0.813795071099207,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0.664225598535437,3.50301420229236,0,0.587403472388222,0,0,0.431428401637234,0.426910231213777,5.75942385747893,4.99306318531491,0.604780586659361,0,0,0,0,0,0.804269605718038,0,0.462629081407967,0.710246901252508,0.328508624055237,0,1.04589340613963,0,2.80709058424599,0.828728900423067,0.803701137152247,1.45672934405374,0.524497659837696,2.25599806453706,0.770153371044148,2.35304930753057,2.92278449306521,0.316654886678627,1.13733384070897,0.170093705276516,0.215915916102139,1.54227252690289,1.35473218771926,1.00337954770971,1.78413391131527,2.49322802678617,1.56712328305525,6.13927654608617,6.27445082459761,0,0.328014645699706,0,0,0,0,6.89118645595407,4.55042172225565,0,0.48335359146061,0.308097234229289,0.15350367472613,0.551346289938122,0.322260734604821,0,0.852266274161009,0.267096106940212,9.91709492165869,9.4173133008902,9.82617886208298,5.96830907047745,1.39453664789186,3.46293581513704,1.3940745403212,1.84820148105653,1.06461206063404,1.73986598415015,3.15051172476664,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,3.83846686967001,0.42793898803392,0.95460974377781,3.13979456079692,0.359744915166629,0,0.706874414074119,1.61745985258653,0,0,1.46290121726877,10.9671070334078,1.05650146756755,0,0.565621727814851,1.13008116620243,0,1.32687795048244,0.438450885253763,3.47265320560013,0.655894752046633,0.811641507850816,0,0.845086807596724,0.286822704408103,0.0982490410131212,1.426684205925,1.06428319221179,0.422215270595328,0,0,0.349934720244983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| ||
|short_description=p5@SLC38A5 | |short_description=p5@SLC38A5 | ||
}} | }} |
Latest revision as of 18:20, 15 September 2015
Short description: | p5@SLC38A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC38A5_5end |
Coexpression cluster: | NA |
Association with transcript: | -339bp_to_ENST00000416711_5end |
EntrezGene: | SLC38A5 |
HGNC: | 18070 |
UniProt: | C9JMY2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.46e-09 | 13 |
endo-epithelial cell | 4.17e-09 | 42 |
general ecto-epithelial cell | 7.34e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 4.79e-10 | 74 |
respiratory tract | 1.26e-08 | 54 |
larynx | 4.83e-08 | 9 |
endoderm-derived structure | 3.08e-07 | 160 |
endoderm | 3.08e-07 | 160 |
presumptive endoderm | 3.08e-07 | 160 |
segment of respiratory tract | 3.09e-07 | 47 |
upper respiratory tract | 9.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.12e-12 | 51 |
immune system cancer | 2.12e-12 | 51 |
leukemia | 1.04e-09 | 39 |
myeloid leukemia | 2.86e-07 | 31 |
chronic leukemia | 4.48e-07 | 8 |