FFCP PHASE1:Hg19::chr19:1254962..1254989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90007 | |EntrezGene=90007 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16298 | |HGNC=16298 | ||
|TSSclassifier=strong | |||
|UniProt=Q504T8 | |UniProt=Q504T8 | ||
|association_with_transcript=-456bp_to_BC015089_5end | |association_with_transcript=-456bp_to_BC015089_5end | ||
|cluster_id=chr19:1254962..1254989,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_8_at_MIDN_5end | |description=CAGE_peak_8_at_MIDN_5end | ||
|id=chr19:1254962..1254989,+ | |id=chr19:1254962..1254989,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.60e-14!42;CL:0000860!1.66e-13!45;CL:0000766!1.60e-11!76;CL:0000557!1.42e-08!71;CL:0000839!2.85e-08!70;CL:0002194!1.58e-07!63;CL:0000576!1.58e-07!63;CL:0000040!1.58e-07!63;CL:0000559!1.58e-07!63;CL:0002009!2.41e-07!65 | |ontology_enrichment_celltype=CL:0002057!2.60e-14!42;CL:0000860!1.66e-13!45;CL:0000766!1.60e-11!76;CL:0000557!1.42e-08!71;CL:0000839!2.85e-08!70;CL:0002194!1.58e-07!63;CL:0000576!1.58e-07!63;CL:0000040!1.58e-07!63;CL:0000559!1.58e-07!63;CL:0002009!2.41e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.62e-20;33!CL:0002057;7.62e-20;33!CL:0000473;2.22e-15;39!CL:0000234;2.22e-15;39!CL:0000576;5.57e-11;48!CL:0000766;2.85e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.86e-21,42;CL:0002057,4.86e-21,42;CL:0000766,1.33e-19,72;CL:0000473,1.85e-19,48;CL:0000234,1.85e-19,48;CL:0000557,2.26e-15,67;CL:0000839,8.25e-15,66;CL:0002009,2.54e-13,61;CL:0002194,3.54e-13,59;CL:0000576,3.54e-13,59;CL:0000040,3.54e-13,59;CL:0000559,3.54e-13,59;CL:0000738,1.81e-11,136;CL:0000763,5.27e-10,108;CL:0000049,5.27e-10,108;CL:0002031,6.38e-09,120;CL:0002087,4.86e-08,115;CL:0000988,3.95e-07,177;CL:0000037,4.79e-07,168;CL:0002032,6.50e-07,161;CL:0000837,6.50e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;5.61e-15;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.96e-07!102;UBERON:0003061!6.96e-07!102;UBERON:0002371!9.50e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.20e-13,76;UBERON:0002390,6.45e-13,98;UBERON:0003061,6.45e-13,98;UBERON:0001474,1.03e-11,82;UBERON:0002193,5.08e-11,108;UBERON:0004765,5.89e-11,90;UBERON:0002405,4.53e-10,93;UBERON:0001434,3.66e-09,100;UBERON:0003081,7.41e-09,203;UBERON:0000926,4.27e-07,315;UBERON:0004120,4.27e-07,315;UBERON:0006603,4.27e-07,315 | |||
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|short_description=p8@MIDN | |short_description=p8@MIDN | ||
}} | }} |
Latest revision as of 18:27, 15 September 2015
Short description: | p8@MIDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MIDN_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -456bp_to_BC015089_5end |
EntrezGene: | MIDN |
HGNC: | 16298 |
UniProt: | Q504T8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.86e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.86e-21 | 42 |
myeloid leukocyte | 1.33e-19 | 72 |
defensive cell | 1.85e-19 | 48 |
phagocyte | 1.85e-19 | 48 |
granulocyte monocyte progenitor cell | 2.26e-15 | 67 |
myeloid lineage restricted progenitor cell | 8.25e-15 | 66 |
macrophage dendritic cell progenitor | 2.54e-13 | 61 |
monopoietic cell | 3.54e-13 | 59 |
monocyte | 3.54e-13 | 59 |
monoblast | 3.54e-13 | 59 |
promonocyte | 3.54e-13 | 59 |
leukocyte | 1.81e-11 | 136 |
myeloid cell | 5.27e-10 | 108 |
common myeloid progenitor | 5.27e-10 | 108 |
hematopoietic lineage restricted progenitor cell | 6.38e-09 | 120 |
nongranular leukocyte | 4.86e-08 | 115 |
hematopoietic cell | 3.95e-07 | 177 |
hematopoietic stem cell | 4.79e-07 | 168 |
hematopoietic oligopotent progenitor cell | 6.50e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.50e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.20e-13 | 76 |
hematopoietic system | 6.45e-13 | 98 |
blood island | 6.45e-13 | 98 |
bone element | 1.03e-11 | 82 |
hemolymphoid system | 5.08e-11 | 108 |
skeletal element | 5.89e-11 | 90 |
immune system | 4.53e-10 | 93 |
skeletal system | 3.66e-09 | 100 |
lateral plate mesoderm | 7.41e-09 | 203 |
mesoderm | 4.27e-07 | 315 |
mesoderm-derived structure | 4.27e-07 | 315 |
presumptive mesoderm | 4.27e-07 | 315 |