FFCP PHASE2:Hg19::chr19:12721616..12721640,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:57474 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:23705 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=57474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=23705 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9ULM2,F8WDW6 | ||
|association_with_transcript=0bp_to_ENST00000311437,ENST00000414906,NM_020714,uc002mtz.2_5end | |association_with_transcript=0bp_to_ENST00000311437,ENST00000414906,NM_020714,uc002mtz.2_5end | ||
|cluster_id=chr19:12721616..12721640,- | |cluster_id=chr19:12721616..12721640,- | ||
Latest revision as of 19:11, 15 September 2015
| Short description: | p2@ZNF490 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_ZNF490_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000311437, ENST00000414906, NM_020714, uc002mtz.2_5end |
| EntrezGene: | ZNF490 |
| HGNC: | 23705 |
| UniProt: | Q9ULM2F8WDW6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@ZNF490 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 5.77e-20 | 136 |
| hematopoietic stem cell | 1.24e-19 | 168 |
| hematopoietic cell | 6.41e-19 | 177 |
| hematopoietic oligopotent progenitor cell | 1.60e-17 | 161 |
| hematopoietic multipotent progenitor cell | 1.60e-17 | 161 |
| hematopoietic lineage restricted progenitor cell | 9.24e-17 | 120 |
| nongranular leukocyte | 2.00e-15 | 115 |
| lymphoid lineage restricted progenitor cell | 1.22e-14 | 52 |
| lymphocyte | 2.56e-14 | 53 |
| common lymphoid progenitor | 2.56e-14 | 53 |
Showing 1 to 10 of 19 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 6.66e-08 | 98 |
| blood island | 6.66e-08 | 98 |
| neural tube | 1.59e-07 | 56 |
| neural rod | 1.59e-07 | 56 |
| future spinal cord | 1.59e-07 | 56 |
| neural keel | 1.59e-07 | 56 |
| central nervous system | 1.78e-07 | 81 |
| regional part of nervous system | 2.48e-07 | 53 |
| regional part of brain | 2.48e-07 | 53 |
| hemolymphoid system | 4.06e-07 | 108 |
Showing 1 to 10 of 17 entries
