FFCP PHASE1:Hg19::chr4:142142035..142142130,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:142142035..142142130,+ to FFCP PHASE1:Hg19::chr4:142142035..142142130,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27309 | |EntrezGene=27309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15462 | |HGNC=15462 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y3S2,E9PDK6,D6R9C8,D6RCK7,D6RBS7,D6R8Y9,D6RBR7,D6R9Q8 | |UniProt=Q9Y3S2,E9PDK6,D6R9C8,D6RCK7,D6RBS7,D6R8Y9,D6RBR7,D6R9Q8 | ||
|association_with_transcript=0bp_to_ENST00000262990,ENST00000421169,ENST00000503649,ENST00000506302,ENST00000507532,ENST00000512738,ENST00000512809,ENST00000514826,ENST00000515453,NM_014487,uc003iiq.3,uc011chl.1_5end | |||
|cluster_id=chr4:142142035..142142130,+ | |||
|description=CAGE_peak_1_at_ZNF330_5end | |||
|id=chr4:142142035..142142130,+ | |||
|ontology_enrichment_celltype=CL:0000557!1.71e-27!71;CL:0002032!1.76e-27!165;CL:0000837!1.76e-27!165;CL:0000037!2.21e-27!172;CL:0000566!2.21e-27!172;CL:0002031!2.39e-27!124;CL:0002009!1.14e-25!65;CL:0000839!7.97e-25!70;CL:0002194!9.42e-25!63;CL:0000576!9.42e-25!63;CL:0000040!9.42e-25!63;CL:0000559!9.42e-25!63;CL:0002087!9.72e-25!119;CL:0000988!2.42e-24!182;CL:0000738!3.89e-24!140;CL:0000763!1.77e-23!112;CL:0000049!1.77e-23!112;CL:0002057!1.73e-22!42;CL:0000766!2.65e-22!76;CL:0000860!5.65e-21!45;CL:0000134!3.20e-08!358;CL:0000219!2.46e-07!390;CL:0002320!3.88e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.00e-18;33!CL:0002057;9.00e-18;33!CL:0000473;1.21e-17;39!CL:0000234;1.21e-17;39!CL:0000576;7.23e-16;48!CL:0000766;5.50e-11;69!CL:0000763;5.11e-08;100!CL:0002087;2.18e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.29e-29,67;CL:0002031,1.27e-28,120;CL:0002032,1.78e-28,161;CL:0000837,1.78e-28,161;CL:0000037,2.44e-28,168;CL:0002009,7.78e-28,61;CL:0002194,6.51e-27,59;CL:0000576,6.51e-27,59;CL:0000040,6.51e-27,59;CL:0000559,6.51e-27,59;CL:0000839,8.61e-27,66;CL:0002087,5.88e-26,115;CL:0000988,8.45e-26,177;CL:0000473,1.05e-25,48;CL:0000234,1.05e-25,48;CL:0000738,3.59e-25,136;CL:0000763,1.04e-24,108;CL:0000049,1.04e-24,108;CL:0000766,5.78e-24,72;CL:0000860,1.73e-22,42;CL:0002057,1.73e-22,42;CL:0000134,1.55e-08,354;CL:0000219,1.29e-07,386;CL:0002320,2.02e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.63e-16;42!CL:0000049;1.16e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.38e-25!80;UBERON:0001474!5.89e-24!86;UBERON:0002390!1.14e-18!102;UBERON:0003061!1.14e-18!102;UBERON:0004765!7.85e-18!101;UBERON:0001434!7.85e-18!101;UBERON:0002193!9.31e-16!112;UBERON:0002405!7.51e-15!115;UBERON:0002204!3.29e-08!167;UBERON:0002384!4.00e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.53e-26,76;UBERON:0001474,1.54e-25,82;UBERON:0004765,2.26e-22,90;UBERON:0002405,3.26e-21,93;UBERON:0002390,9.04e-20,98;UBERON:0003061,9.04e-20,98;UBERON:0001434,1.33e-17,100;UBERON:0002193,1.22e-16,108;UBERON:0002204,5.11e-08,167;UBERON:0002384,2.10e-07,371 | |||
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| ||
|short_description=p1@ZNF330 | |||
}} | }} |
Latest revision as of 20:29, 15 September 2015
Short description: | p1@ZNF330 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF330_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000262990, ENST00000421169, ENST00000503649, ENST00000506302, ENST00000507532, ENST00000512738, ENST00000512809, ENST00000514826, ENST00000515453, NM_014487, uc003iiq.3, uc011chl.1_5end |
EntrezGene: | ZNF330 |
HGNC: | 15462 |
UniProt: | Q9Y3S2E9PDK6D6R9C8D6RCK7D6RBS7D6R8Y9D6RBR7D6R9Q8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.29e-29 | 67 |
hematopoietic lineage restricted progenitor cell | 1.27e-28 | 120 |
hematopoietic oligopotent progenitor cell | 1.78e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-28 | 161 |
hematopoietic stem cell | 2.44e-28 | 168 |
macrophage dendritic cell progenitor | 7.78e-28 | 61 |
monopoietic cell | 6.51e-27 | 59 |
monocyte | 6.51e-27 | 59 |
monoblast | 6.51e-27 | 59 |
promonocyte | 6.51e-27 | 59 |
myeloid lineage restricted progenitor cell | 8.61e-27 | 66 |
nongranular leukocyte | 5.88e-26 | 115 |
hematopoietic cell | 8.45e-26 | 177 |
defensive cell | 1.05e-25 | 48 |
phagocyte | 1.05e-25 | 48 |
leukocyte | 3.59e-25 | 136 |
myeloid cell | 1.04e-24 | 108 |
common myeloid progenitor | 1.04e-24 | 108 |
myeloid leukocyte | 5.78e-24 | 72 |
classical monocyte | 1.73e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-22 | 42 |
mesenchymal cell | 1.55e-08 | 354 |
motile cell | 1.29e-07 | 386 |
connective tissue cell | 2.02e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.53e-26 | 76 |
bone element | 1.54e-25 | 82 |
skeletal element | 2.26e-22 | 90 |
immune system | 3.26e-21 | 93 |
hematopoietic system | 9.04e-20 | 98 |
blood island | 9.04e-20 | 98 |
skeletal system | 1.33e-17 | 100 |
hemolymphoid system | 1.22e-16 | 108 |
musculoskeletal system | 5.11e-08 | 167 |
connective tissue | 2.10e-07 | 371 |