FFCP PHASE1:Hg19::chr12:10331652..10331666,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:10331652..10331666,+ to FFCP PHASE1:Hg19::chr12:10331652..10331666,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=120939 | |EntrezGene=120939 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26438 | |HGNC=26438 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000298530_5end | |||
|cluster_id=chr12:10331652..10331666,+ | |||
|coexpression_cluster_id=C2176 | |||
|description=CAGE_peak_3_at_C12orf59_5end | |||
|id=chr12:10331652..10331666,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.56e-44!45;CL:0002057!8.35e-40!42;CL:0002194!4.29e-28!63;CL:0000576!4.29e-28!63;CL:0000040!4.29e-28!63;CL:0000559!4.29e-28!63;CL:0002009!6.17e-27!65;CL:0000839!2.47e-24!70;CL:0000557!7.39e-24!71;CL:0000766!1.14e-21!76;CL:0000763!8.63e-12!112;CL:0000049!8.63e-12!112;CL:0002087!2.14e-11!119;CL:0002031!7.92e-10!124;CL:0000738!2.08e-08!140;CL:0002541!1.55e-07!3;CL:0000077!3.65e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.47e-47;33!CL:0002057;1.47e-47;33!CL:0000473;1.64e-31;39!CL:0000234;1.64e-31;39!CL:0000576;9.43e-23;48!CL:0000766;8.18e-12;69!CL:0002541;1.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.02e-44,42;CL:0002057,7.02e-44,42;CL:0000473,8.81e-38,48;CL:0000234,8.81e-38,48;CL:0002194,3.03e-29,59;CL:0000576,3.03e-29,59;CL:0000040,3.03e-29,59;CL:0000559,3.03e-29,59;CL:0002009,3.82e-28,61;CL:0000839,1.11e-25,66;CL:0000557,3.14e-25,67;CL:0000766,3.61e-23,72;CL:0000763,6.26e-14,108;CL:0000049,6.26e-14,108;CL:0002087,8.35e-13,115;CL:0002031,4.41e-12,120;CL:0000738,3.95e-10,136;CL:0002032,7.21e-08,161;CL:0000837,7.21e-08,161;CL:0002541,1.92e-07,3;CL:0000037,2.33e-07,168;CL:0000988,9.12e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.07e-32;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.08e-20!80;UBERON:0001474!4.60e-18!86;UBERON:0002405!3.02e-15!115;UBERON:0002390!8.42e-15!102;UBERON:0003061!8.42e-15!102;UBERON:0004765!4.95e-14!101;UBERON:0001434!4.95e-14!101;UBERON:0002193!1.47e-13!112;UBERON:0000344!1.04e-07!12;UBERON:0000476!1.55e-07!3;UBERON:0000920!1.55e-07!3;UBERON:0002204!1.85e-07!167;UBERON:0005631!7.30e-07!14;UBERON:0000158!7.30e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;7.99e-08;10!UBERON:0000158;7.99e-08;10!UBERON:0003124;1.98e-07;3!UBERON:0000920;1.98e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.03e-21,76;UBERON:0001474,8.58e-20,82;UBERON:0004765,1.25e-17,90;UBERON:0002405,6.50e-17,93;UBERON:0002390,8.11e-16,98;UBERON:0003061,8.11e-16,98;UBERON:0001434,2.07e-15,100;UBERON:0002193,6.26e-14,108;UBERON:0000920,1.92e-07,3;UBERON:0002204,1.98e-07,167;UBERON:0003081,7.20e-07,203 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0,0,0,0,0.581592955118259,1.13362783106643,1.69808842831471,1.16214518452842,0,1.23882548358041,0.575384784644301,1.0246428261164,2.12834006899727,1.72372840368309,0.645484683583826,1.35426486594342,0.564727018627814,1.36453075028923,1.79778787556068,3.67300670845083,4.17207735198922,1.27867425159808,0.329851300186716,1.19678194572979,0.426224750532694,1.45104619314292,1.70215567407342,1.24564449799115,0.75374599577023,1.0429658368404,0.868755378820466,0,2.20966581592539,3.79754864929061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91171533116422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,1.0075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59562869950922,2.08014873822732,0,0,0,0.714889968290738,0,0,0,0.710783897485092,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0.846016147141356,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,2.23300811812344,2.1983422416447,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,1.13082457147153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0.0967563312890851,0.511625219603299,0.164230914106418,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0.135904206073614,0.104602846312333,8.56785028145103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6393519243926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8237977992474,15.8937402049044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,1.14241563650639,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,5.21423628678226,0,0,0,0.926404341482917,1.09642024789354,0,0,0,0,0.345430341731199,2.43087964941906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2874366829448,0,0,0,0,0,0,0,0,4.80923820655025,0.235939446695481,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,8.12789273609988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0,0,0,0,0.581592955118259,1.13362783106643,1.69808842831471,1.16214518452842,0,1.23882548358041,0.575384784644301,1.0246428261164,2.12834006899727,1.72372840368309,0.645484683583826,1.35426486594342,0.564727018627814,1.36453075028923,1.79778787556068,3.67300670845083,4.17207735198922,1.27867425159808,0.329851300186716,1.19678194572979,0.426224750532694,1.45104619314292,1.70215567407342,1.24564449799115,0.75374599577023,1.0429658368404,0.868755378820466,0,2.20966581592539,3.79754864929061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91171533116422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,1.0075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59562869950922,2.08014873822732,0,0,0,0.714889968290738,0,0,0,0.710783897485092,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0.846016147141356,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,2.23300811812344,2.1983422416447,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,1.13082457147153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0.0967563312890851,0.511625219603299,0.164230914106418,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0.135904206073614,0.104602846312333,8.56785028145103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6393519243926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8237977992474,15.8937402049044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,1.14241563650639,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,5.21423628678226,0,0,0,0.926404341482917,1.09642024789354,0,0,0,0,0.345430341731199,2.43087964941906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2874366829448,0,0,0,0,0,0,0,0,4.80923820655025,0.235939446695481,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,8.12789273609988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@C12orf59 | |||
}} | }} |
Latest revision as of 21:49, 15 September 2015
Short description: | p3@C12orf59 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C12orf59_5end |
Coexpression cluster: | C2176_kidney_hepatoblastoma_rectal_glioblastoma_normal_mesothelioma_oral |
Association with transcript: | 40bp_to_ENST00000298530_5end |
EntrezGene: | C12orf59 |
HGNC: | 26438 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.02e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.02e-44 | 42 |
defensive cell | 8.81e-38 | 48 |
phagocyte | 8.81e-38 | 48 |
monopoietic cell | 3.03e-29 | 59 |
monocyte | 3.03e-29 | 59 |
monoblast | 3.03e-29 | 59 |
promonocyte | 3.03e-29 | 59 |
macrophage dendritic cell progenitor | 3.82e-28 | 61 |
myeloid lineage restricted progenitor cell | 1.11e-25 | 66 |
granulocyte monocyte progenitor cell | 3.14e-25 | 67 |
myeloid leukocyte | 3.61e-23 | 72 |
myeloid cell | 6.26e-14 | 108 |
common myeloid progenitor | 6.26e-14 | 108 |
nongranular leukocyte | 8.35e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 4.41e-12 | 120 |
leukocyte | 3.95e-10 | 136 |
hematopoietic oligopotent progenitor cell | 7.21e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.21e-08 | 161 |
chorionic membrane mesenchymal stem cell | 1.92e-07 | 3 |
hematopoietic stem cell | 2.33e-07 | 168 |
hematopoietic cell | 9.12e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.03e-21 | 76 |
bone element | 8.58e-20 | 82 |
skeletal element | 1.25e-17 | 90 |
immune system | 6.50e-17 | 93 |
hematopoietic system | 8.11e-16 | 98 |
blood island | 8.11e-16 | 98 |
skeletal system | 2.07e-15 | 100 |
hemolymphoid system | 6.26e-14 | 108 |
egg chorion | 1.92e-07 | 3 |
musculoskeletal system | 1.98e-07 | 167 |
lateral plate mesoderm | 7.20e-07 | 203 |