FFCP PHASE1:Hg19::chr6:144980861..144980870,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7402 | |EntrezGene=7402 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12635 | |HGNC=12635 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T098 | |UniProt=Q5T098 | ||
|association_with_transcript=-109bp_to_ENST00000367525_5end | |association_with_transcript=-109bp_to_ENST00000367525_5end | ||
|cluster_id=chr6:144980861..144980870,+ | |||
|coexpression_cluster_id=C92 | |coexpression_cluster_id=C92 | ||
|description=CAGE_peak_38_at_UTRN_5end | |description=CAGE_peak_38_at_UTRN_5end | ||
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|ontology_enrichment_celltype=CL:0002057!5.34e-45!42;CL:0000860!2.14e-41!45;CL:0002194!3.92e-35!63;CL:0000576!3.92e-35!63;CL:0000040!3.92e-35!63;CL:0000559!3.92e-35!63;CL:0002009!9.14e-34!65;CL:0000766!1.15e-31!76;CL:0000839!1.10e-30!70;CL:0000557!4.01e-30!71;CL:0002087!6.87e-26!119;CL:0000738!5.66e-23!140;CL:0002031!3.61e-20!124;CL:0002393!1.37e-18!9;CL:0002397!1.37e-18!9;CL:0000763!2.49e-18!112;CL:0000049!2.49e-18!112;CL:0000037!1.72e-16!172;CL:0000566!1.72e-16!172;CL:0000988!5.99e-15!182;CL:0002032!1.54e-14!165;CL:0000837!1.54e-14!165;CL:0000224!1.17e-10!4;CL:0000875!2.71e-09!3;CL:0002396!2.71e-09!3;CL:0000842!3.27e-08!3 | |ontology_enrichment_celltype=CL:0002057!5.34e-45!42;CL:0000860!2.14e-41!45;CL:0002194!3.92e-35!63;CL:0000576!3.92e-35!63;CL:0000040!3.92e-35!63;CL:0000559!3.92e-35!63;CL:0002009!9.14e-34!65;CL:0000766!1.15e-31!76;CL:0000839!1.10e-30!70;CL:0000557!4.01e-30!71;CL:0002087!6.87e-26!119;CL:0000738!5.66e-23!140;CL:0002031!3.61e-20!124;CL:0002393!1.37e-18!9;CL:0002397!1.37e-18!9;CL:0000763!2.49e-18!112;CL:0000049!2.49e-18!112;CL:0000037!1.72e-16!172;CL:0000566!1.72e-16!172;CL:0000988!5.99e-15!182;CL:0002032!1.54e-14!165;CL:0000837!1.54e-14!165;CL:0000224!1.17e-10!4;CL:0000875!2.71e-09!3;CL:0002396!2.71e-09!3;CL:0000842!3.27e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000875;2.94e-41;3!CL:0002396;2.94e-41;3!CL:0002393;1.25e-35;6!CL:0002397;1.25e-35;6!CL:0000576;8.96e-23;48!CL:0000766;1.44e-15;69!CL:0000228;1.84e-14;1!CL:0002372;1.84e-14;1 | |ontology_enrichment_celltype_v019=CL:0000875;2.94e-41;3!CL:0002396;2.94e-41;3!CL:0002393;1.25e-35;6!CL:0002397;1.25e-35;6!CL:0000576;8.96e-23;48!CL:0000766;1.44e-15;69!CL:0000228;1.84e-14;1!CL:0002372;1.84e-14;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.84e-72,9;CL:0002397,2.84e-72,9;CL:0000875,2.57e-41,3;CL:0002396,2.57e-41,3;CL:0000860,5.59e-37,42;CL:0002057,5.59e-37,42;CL:0000473,3.19e-32,48;CL:0000234,3.19e-32,48;CL:0002194,1.48e-25,59;CL:0000576,1.48e-25,59;CL:0000040,1.48e-25,59;CL:0000559,1.48e-25,59;CL:0000766,8.12e-25,72;CL:0002009,1.08e-24,61;CL:0000839,9.14e-23,66;CL:0000557,2.05e-22,67;CL:0000763,3.46e-16,108;CL:0000049,3.46e-16,108;CL:0000228,1.61e-14,1;CL:0002372,1.61e-14,1;CL:0002087,1.25e-12,115;CL:0000738,1.35e-12,136;CL:0002031,4.71e-12,120;CL:0002032,1.98e-10,161;CL:0000837,1.98e-10,161;CL:0000037,6.16e-10,168;CL:0000988,2.33e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.07e-27;42!CL:0000049;5.70e-08;108 | |ontology_enrichment_development_v019=CL:0002057;2.07e-27;42!CL:0000049;5.70e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.69e-30!102;UBERON:0003061!1.69e-30!102;UBERON:0002371!1.90e-27!80;UBERON:0002193!9.39e-27!112;UBERON:0001474!7.28e-25!86;UBERON:0004765!3.25e-21!101;UBERON:0001434!3.25e-21!101;UBERON:0002405!8.23e-20!115;UBERON:0002204!2.54e-14!167;UBERON:0003081!2.57e-09!216 | |ontology_enrichment_uberon=UBERON:0002390!1.69e-30!102;UBERON:0003061!1.69e-30!102;UBERON:0002371!1.90e-27!80;UBERON:0002193!9.39e-27!112;UBERON:0001474!7.28e-25!86;UBERON:0004765!3.25e-21!101;UBERON:0001434!3.25e-21!101;UBERON:0002405!8.23e-20!115;UBERON:0002204!2.54e-14!167;UBERON:0003081!2.57e-09!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.18e-19,76;UBERON:0001474,3.79e-18,82;UBERON:0002390,5.32e-18,98;UBERON:0003061,5.32e-18,98;UBERON:0004765,1.91e-16,90;UBERON:0002193,3.17e-16,108;UBERON:0002405,7.00e-16,93;UBERON:0001434,1.08e-14,100;UBERON:0002204,5.17e-10,167;UBERON:0003081,5.40e-08,203 | |||
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| ||
|short_description=p38@UTRN | |short_description=p38@UTRN | ||
}} | }} |
Latest revision as of 22:04, 15 September 2015
Short description: | p38@UTRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_UTRN_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -109bp_to_ENST00000367525_5end |
EntrezGene: | UTRN |
HGNC: | 12635 |
UniProt: | Q5T098 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.84e-72 | 9 |
CD14-positive, CD16-positive monocyte | 2.84e-72 | 9 |
non-classical monocyte | 2.57e-41 | 3 |
CD14-low, CD16-positive monocyte | 2.57e-41 | 3 |
classical monocyte | 5.59e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.59e-37 | 42 |
defensive cell | 3.19e-32 | 48 |
phagocyte | 3.19e-32 | 48 |
monopoietic cell | 1.48e-25 | 59 |
monocyte | 1.48e-25 | 59 |
monoblast | 1.48e-25 | 59 |
promonocyte | 1.48e-25 | 59 |
myeloid leukocyte | 8.12e-25 | 72 |
macrophage dendritic cell progenitor | 1.08e-24 | 61 |
myeloid lineage restricted progenitor cell | 9.14e-23 | 66 |
granulocyte monocyte progenitor cell | 2.05e-22 | 67 |
myeloid cell | 3.46e-16 | 108 |
common myeloid progenitor | 3.46e-16 | 108 |
multinucleate cell | 1.61e-14 | 1 |
myotube | 1.61e-14 | 1 |
nongranular leukocyte | 1.25e-12 | 115 |
leukocyte | 1.35e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 4.71e-12 | 120 |
hematopoietic oligopotent progenitor cell | 1.98e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.98e-10 | 161 |
hematopoietic stem cell | 6.16e-10 | 168 |
hematopoietic cell | 2.33e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.18e-19 | 76 |
bone element | 3.79e-18 | 82 |
hematopoietic system | 5.32e-18 | 98 |
blood island | 5.32e-18 | 98 |
skeletal element | 1.91e-16 | 90 |
hemolymphoid system | 3.17e-16 | 108 |
immune system | 7.00e-16 | 93 |
skeletal system | 1.08e-14 | 100 |
musculoskeletal system | 5.17e-10 | 167 |
lateral plate mesoderm | 5.40e-08 | 203 |