FFCP PHASE1:Hg19::chrX:49595041..49595050,+: Difference between revisions
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|id=chrX:49595041..49595050,+
|short_description=p4@PAGE4
|description=CAGE_peak_4_at_PAGE4_5end
|association_with_transcript=-236bp_to_ENST00000474146_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9506 | |EntrezGene=9506 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4108 | |HGNC=4108 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-236bp_to_ENST00000474146_5end | |||
|cluster_id=chrX:49595041..49595050,+ | |||
|coexpression_cluster_id=C923 | |||
|description=CAGE_peak_4_at_PAGE4_5end | |||
|id=chrX:49595041..49595050,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.14e-26;2!UBERON:0005795;8.54e-21;10!UBERON:0009847;8.00e-18;3!UBERON:0003353;8.00e-18;3!UBERON:0006603;1.86e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.75e-34!3;UBERON:0004054!1.75e-34!3;UBERON:0005904!4.74e-26!4;UBERON:0003135!2.16e-25!11;UBERON:0003101!4.77e-18!22;UBERON:0000079!4.77e-18!22;UBERON:0003133!1.06e-17!48;UBERON:0005156!1.29e-17!59;UBERON:0000990!1.29e-17!59;UBERON:0004175!8.05e-16!25;UBERON:0000473!3.78e-13!8;UBERON:0001301!8.85e-13!1;UBERON:0006834!9.92e-13!1;UBERON:0000998!1.11e-12!1;UBERON:0006868!1.11e-12!1;UBERON:0001000!1.25e-12!1;UBERON:0005352!1.25e-12!1;UBERON:0007023!3.14e-12!115;UBERON:0000991!1.07e-08!21;UBERON:0009196!1.07e-08!21;UBERON:0009117!1.07e-08!21;UBERON:0005564!1.07e-08!21;UBERON:0005795!2.03e-08!22;UBERON:0004176!2.62e-08!22;UBERON:0002148!9.54e-07!2;UBERON:0009662!9.54e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;1.46e-50;1!UBERON:0001301;3.99e-50;1!UBERON:0006834;6.58e-50;1!UBERON:0006947;9.46e-18;3!UBERON:0004054;9.46e-18;3!UBERON:0005904;1.13e-13;4!UBERON:0002050;2.66e-11;5!UBERON:0005423;2.66e-11;5!UBERON:0004175;1.86e-10;21!UBERON:0003101;4.53e-10;22!UBERON:0000079;4.53e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.99e-50,1;UBERON:0006834,6.58e-50,1;UBERON:0006947,9.46e-18,3;UBERON:0004054,9.46e-18,3;UBERON:0005904,1.13e-13,4;UBERON:0005795,4.53e-10,22;UBERON:0003101,4.53e-10,22;UBERON:0000079,4.53e-10,22;UBERON:0004175,5.95e-09,25;UBERON:0005156,1.98e-08,59;UBERON:0000990,1.98e-08,59;UBERON:0003064,3.92e-08,28;UBERON:0005103,1.69e-07,8;UBERON:0000083,1.69e-07,8;UBERON:0009201,1.69e-07,8;UBERON:0006553,1.69e-07,8;UBERON:0003074,1.69e-07,8;UBERON:0003060,1.69e-07,8;UBERON:0000080,8.37e-07,9;UBERON:0002120,8.37e-07,9;UBERON:0004875,8.37e-07,9;UBERON:0005721,8.37e-07,9;UBERON:0005754,8.37e-07,9;UBERON:0007297,8.37e-07,9 | |||
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|short_description=p4@PAGE4 | |||
}} | }} |
Latest revision as of 22:06, 15 September 2015
Short description: | p4@PAGE4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PAGE4_5end |
Coexpression cluster: | C923_uterus_epididymis_prostate_Hepatocyte_cervix_seminal_skin |
Association with transcript: | -236bp_to_ENST00000474146_5end |
EntrezGene: | PAGE4 |
HGNC: | 4108 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 3.99e-50 | 1 |
uterus or analog | 6.58e-50 | 1 |
male genital duct | 9.46e-18 | 3 |
internal male genitalia | 9.46e-18 | 3 |
duct of male reproductive system | 1.13e-13 | 4 |
embryonic uterus | 4.53e-10 | 22 |
male organism | 4.53e-10 | 22 |
male reproductive system | 4.53e-10 | 22 |
internal genitalia | 5.95e-09 | 25 |
reproductive structure | 1.98e-08 | 59 |
reproductive system | 1.98e-08 | 59 |
intermediate mesoderm | 3.92e-08 | 28 |
mesonephric epithelium | 1.69e-07 | 8 |
mesonephric tubule | 1.69e-07 | 8 |
nephric duct | 1.69e-07 | 8 |
renal duct | 1.69e-07 | 8 |
mesonephric duct | 1.69e-07 | 8 |
pronephric duct | 1.69e-07 | 8 |
mesonephros | 8.37e-07 | 9 |
pronephros | 8.37e-07 | 9 |
nephrogenic cord | 8.37e-07 | 9 |
pronephric mesoderm | 8.37e-07 | 9 |
rostral part of nephrogenic cord | 8.37e-07 | 9 |
presumptive pronephric mesoderm | 8.37e-07 | 9 |