FFCP PHASE1:Hg19::chr12:10366016..10366036,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23710 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4068 | |||
|TSSclassifier=strong | |||
|UniProt=F5GYD9 | |||
|association_with_transcript=0bp_to_ENST00000539289,ENST00000546017_5end | |||
|cluster_id=chr12:10366016..10366036,+ | |||
|description=CAGE_peak_5_at_GABARAPL1_5end | |||
|id=chr12:10366016..10366036,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.82e-25!45;CL:0002057!1.80e-23!42;CL:0000766!1.30e-19!76;CL:0002194!9.85e-16!63;CL:0000576!9.85e-16!63;CL:0000040!9.85e-16!63;CL:0000559!9.85e-16!63;CL:0000839!3.21e-15!70;CL:0002009!1.69e-14!65;CL:0000557!1.07e-13!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-31;33!CL:0002057;1.19e-31;33!CL:0000473;1.04e-20;39!CL:0000234;1.04e-20;39!CL:0000576;2.07e-19;48!CL:0000766;3.51e-14;69!CL:0000094;1.03e-09;8!CL:0000136;2.94e-08;13!CL:0002393;5.64e-07;6!CL:0002397;5.64e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.71e-36,42;CL:0002057,1.71e-36,42;CL:0000473,4.50e-30,48;CL:0000234,4.50e-30,48;CL:0000766,1.33e-27,72;CL:0002194,3.25e-21,59;CL:0000576,3.25e-21,59;CL:0000040,3.25e-21,59;CL:0000559,3.25e-21,59;CL:0002009,4.34e-20,61;CL:0000839,1.26e-19,66;CL:0000557,3.92e-19,67;CL:0000738,9.80e-14,136;CL:0000763,4.04e-13,108;CL:0000049,4.04e-13,108;CL:0002087,5.35e-11,115;CL:0000094,1.17e-09,8;CL:0000134,2.41e-09,354;CL:0002031,3.78e-09,120;CL:0002320,5.36e-09,361;CL:0000037,4.33e-08,168;CL:0002032,1.58e-07,161;CL:0000837,1.58e-07,161;CL:0000988,2.58e-07,177;CL:0000048,7.21e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.26e-10!80;UBERON:0001474!8.95e-10!86;UBERON:0000062!1.41e-07!511;UBERON:0004765!2.06e-07!101;UBERON:0001434!2.06e-07!101;UBERON:0002390!2.35e-07!102;UBERON:0003061!2.35e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.85e-09;9!UBERON:0001557;6.85e-09;9!UBERON:0004457;4.18e-08;9!UBERON:0000042;4.18e-08;9!UBERON:0003688;1.32e-07;6!UBERON:0002358;1.32e-07;6!UBERON:0003684;1.32e-07;6!UBERON:0001178;1.32e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.63e-15,76;UBERON:0001474,4.12e-15,82;UBERON:0004765,1.33e-12,90;UBERON:0001434,1.32e-11,100;UBERON:0002390,2.55e-11,98;UBERON:0003061,2.55e-11,98;UBERON:0002405,6.46e-11,93;UBERON:0002193,1.06e-09,108;UBERON:0001737,5.81e-09,9;UBERON:0002384,2.05e-08,371;UBERON:0003688,1.36e-07,6;UBERON:0002358,1.36e-07,6;UBERON:0003684,1.36e-07,6;UBERON:0001178,1.36e-07,6 | |||
|phase1_expression=1.81678379270557,1.07050261945492,4.08767771878316,4.00293193412522,3.12872766099101,4.36169262050184,0,0,0,0.491467873003018,0.697801167972428,0,0.263766978228454,0.37129905888014,0.994192127183747,0,0.602694528023977,1.46062018077475,0,0,0,0,0,0,0,0,0,0,6.29382842958246,2.30297638858328,5.57338043937874,0,0.30120591877825,0,0,0,0.587200878669695,16.0658668474244,13.8375668754398,7.59538047505481,0,0,0.257575567634187,3.34415949192999,3.77875943688809,2.91100873425379,3.25400651667958,4.93401465626191,5.26500830521676,5.75384784644301,4.86705342405291,9.22280696565482,4.82643953031266,3.87290810150296,13.5426486594342,6.96496656307637,3.0019676506363,6.96642801779762,11.9372718024652,7.38136762275015,13.4260796417799,3.95821560224059,6.58230070151385,7.6720455095885,4.35313857942876,3.40431134814684,3.73693349397345,6.53246529667532,5.73631210262222,9.55630916702513,2.42159801053347,4.05105399586321,6.0127853613768,1.05627643155971,1.27562579979026,1.46761051855863,3.93150209012733,1.95229960693958,0.964353520182481,0,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,4.48406850385229,0,0,0.393010762749165,1.02800749499755,0.167186495390678,0,0,0,0,0,0.443067789167242,0.270803863765016,0,0,0,0.276350017785848,0.579606171470105,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0.821127996921047,2.41928091869679,3.20928234940209,2.31719046212478,0,0.670700859703636,0.383587685530591,0.722878304769133,0,0.724232594804119,0,0.973269740605272,0.0945348171640679,0,0.351339142772504,0.982343066232845,0,0.370784442784429,0,0,0.132957960518865,0.715471872916026,0,0.371457501329565,0.39752481473341,0,0,0,0.838998872419812,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,23.7204751384914,15.511210565933,0.436094052142534,0,0.12663051166458,1.19168262731897,0.573673241497627,0,0,0,0,0,0.538842688278752,0.326923806226917,1.21085942115945,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,1.43723628363248,0,0,0,0,0,0.150238058906597,0,1.79389635688862,0.85422955527427,1.27159140695737,1.20036438433761,1.03052529238439,2.83404594050192,2.04728541964749,0,0.292311015483596,0.504867548488229,1.47279837827679,1.61646056818812,1.06502877754984,1.71278566986988,0.169560592310488,0,0,0,0.609868530647977,0.662648841607426,0.348581828608555,0.518305275076852,0,0.36497735907583,0,1.28648187638577,0,0.928735856063958,2.16563844500876,2.36613600079688,3.20310911148393,1.44606617930089,3.74999507290139,3.05031221729369,1.66089433377768,2.29213223872279,5.101758093259,1.53898862778556,0,0,0,0,0,0,0.590789906681404,0,0,1.02940686179115,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0.352226082707465,0.144366447761074,0,0,0,0,0.246217006087397,0.468008530278475,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0,0.829312462163088,1.29707958075265,1.38866676769018,0.126995788584338,0,0,0,0,0.300343057843917,0,0,0.43596006883328,0,0,0,0,9.0418959638856,7.28052058379563,0,0,0,2.00169191121407,0.542621605391443,0,0,3.19852753868291,0,1.50719688529793,3.48613383440118,3.19913571782583,0,0,0,0,0,0,1.15825045334063,0,0,0.448340575974109,2.56139988262505,1.94064817373566,1.79680250791648,0,0,0,0,0.637938751653163,2.24702107184155,2.99161459204025,2.07207756718018,0,0,0.271265023699736,1.03985430765404,0.356857977594324,0.788512075169673,0.234282829985426,0.300946099727719,0,0,0,0,0.260650843404249,0.391602314925481,1.02943027143257,3.10152039184331,6.68714022537712,1.28073069364133,0.303127571446259,0,0.30239029332968,7.44323423456331,1.07423381301644,1.12264037773229,14.4797238658942,1.53512174720011,4.98647155545183,10.3892646511494,0,0.532685175939381,0.246381468041427,0,0.232420756919918,0.362578348774867,0.601519410909855,0,1.03333003348146,0.182091168006717,3.40923478894503,0.451199612907412,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0.219259876645935,0.261435451024901,0,0.656029291399411,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0.330569830721956,0,0.255225424989168,0.10115778085555,0,0.62962469366128,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0.632758849437452,1.71567174531442,0,0,0.318203247925937,0,1.97859703341646,2.47083326762449,0.942499218765491,0.202182481573316,0,0,0.975267478179181,0.731140468893853,0,0.818999468447914,1.69686518344455,0,0,1.32687795048244,1.31535265576129,0,0,0.202910376962704,0.30982349809975,0,0,0.294747123039363,0.35667105148125,0,3.37772216476263,2.63435914367922,0,0,0,0,0,0.470719003883896,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0.427296284509893,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0.23874448473769,0.593929361665277,1.22864280839693,0,0.422008249231538,0,0.16480387422676,0.211125408127993,2.39097585901284,2.76283915531148,0,0,0,0.311039587661807,0,0,0,0.591860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| |||
|short_description=p5@GABARAPL1 | |||
}} |
Latest revision as of 22:30, 15 September 2015
Short description: | p5@GABARAPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GABARAPL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000539289, ENST00000546017_5end |
EntrezGene: | GABARAPL1 |
HGNC: | 4068 |
UniProt: | F5GYD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.71e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.71e-36 | 42 |
defensive cell | 4.50e-30 | 48 |
phagocyte | 4.50e-30 | 48 |
myeloid leukocyte | 1.33e-27 | 72 |
monopoietic cell | 3.25e-21 | 59 |
monocyte | 3.25e-21 | 59 |
monoblast | 3.25e-21 | 59 |
promonocyte | 3.25e-21 | 59 |
macrophage dendritic cell progenitor | 4.34e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.26e-19 | 66 |
granulocyte monocyte progenitor cell | 3.92e-19 | 67 |
leukocyte | 9.80e-14 | 136 |
myeloid cell | 4.04e-13 | 108 |
common myeloid progenitor | 4.04e-13 | 108 |
nongranular leukocyte | 5.35e-11 | 115 |
granulocyte | 1.17e-09 | 8 |
mesenchymal cell | 2.41e-09 | 354 |
hematopoietic lineage restricted progenitor cell | 3.78e-09 | 120 |
connective tissue cell | 5.36e-09 | 361 |
hematopoietic stem cell | 4.33e-08 | 168 |
hematopoietic oligopotent progenitor cell | 1.58e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.58e-07 | 161 |
hematopoietic cell | 2.58e-07 | 177 |
multi fate stem cell | 7.21e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.63e-15 | 76 |
bone element | 4.12e-15 | 82 |
skeletal element | 1.33e-12 | 90 |
skeletal system | 1.32e-11 | 100 |
hematopoietic system | 2.55e-11 | 98 |
blood island | 2.55e-11 | 98 |
immune system | 6.46e-11 | 93 |
hemolymphoid system | 1.06e-09 | 108 |
larynx | 5.81e-09 | 9 |
connective tissue | 2.05e-08 | 371 |
omentum | 1.36e-07 | 6 |
peritoneum | 1.36e-07 | 6 |
abdominal cavity | 1.36e-07 | 6 |
visceral peritoneum | 1.36e-07 | 6 |