FFCP PHASE1:Hg19::chr9:132515302..132515338,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9536 | |EntrezGene=9536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9599 | |HGNC=9599 | ||
|TSSclassifier=strong | |||
|UniProt=O14684 | |UniProt=O14684 | ||
|association_with_transcript=0bp_to_ENST00000340607_5end | |association_with_transcript=0bp_to_ENST00000340607_5end | ||
|cluster_id=chr9:132515302..132515338,- | |||
|coexpression_cluster_id=C4804 | |||
|description=CAGE_peak_1_at_PTGES_5end | |description=CAGE_peak_1_at_PTGES_5end | ||
|id=chr9:132515302..132515338,- | |id=chr9:132515302..132515338,- | ||
|ontology_enrichment_celltype=CL:0000055!4.74e-14!180;CL:0000680!1.21e-07!57;CL:0000056!1.21e-07!57;CL:0000355!1.21e-07!57;CL:0000187!1.39e-07!54;CL:0000057!4.54e-07!75;CL:0000183!6.84e-07!59 | |ontology_enrichment_celltype=CL:0000055!4.74e-14!180;CL:0000680!1.21e-07!57;CL:0000056!1.21e-07!57;CL:0000355!1.21e-07!57;CL:0000187!1.39e-07!54;CL:0000057!4.54e-07!75;CL:0000183!6.84e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.87e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.96e-08,58;CL:0000056,6.96e-08,58;CL:0000355,6.96e-08,58;CL:0000187,8.03e-08,55;CL:0000349,1.77e-07,19;CL:0000057,6.92e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.34e-13!659;UBERON:0000481!2.72e-12!347;UBERON:0000062!6.71e-12!511;UBERON:0004923!7.79e-12!57;UBERON:0003104!2.30e-11!238;UBERON:0009142!2.30e-11!238;UBERON:0000467!5.55e-11!625;UBERON:0000475!8.49e-11!365;UBERON:0002100!8.66e-11!216;UBERON:0000480!1.06e-10!626;UBERON:0003102!1.30e-09!95;UBERON:0005631!1.47e-09!14;UBERON:0000158!1.47e-09!14;UBERON:0000486!3.16e-09!82;UBERON:0000064!5.71e-09!219;UBERON:0005256!6.92e-09!143;UBERON:0000926!8.38e-09!448;UBERON:0004120!8.38e-09!448;UBERON:0006603!8.38e-09!448;UBERON:0000923!9.11e-09!604;UBERON:0005291!9.11e-09!604;UBERON:0006598!9.11e-09!604;UBERON:0002532!9.11e-09!604;UBERON:0002050!9.44e-09!605;UBERON:0005423!9.44e-09!605;UBERON:0000914!1.54e-08!83;UBERON:0002329!1.54e-08!83;UBERON:0003077!1.54e-08!83;UBERON:0003059!1.54e-08!83;UBERON:0007282!1.54e-08!83;UBERON:0009618!1.54e-08!83;UBERON:0007285!1.54e-08!83;UBERON:0000922!1.70e-08!612;UBERON:0001444!3.16e-08!48;UBERON:0004290!3.62e-08!70;UBERON:0004119!1.50e-07!169;UBERON:0000925!1.50e-07!169;UBERON:0006595!1.50e-07!169;UBERON:0001134!7.10e-07!61;UBERON:0002036!7.10e-07!61;UBERON:0003082!7.10e-07!61;UBERON:0000478!8.32e-07!24;UBERON:0002385!8.72e-07!63;UBERON:0001015!8.72e-07!63;UBERON:0000383!8.72e-07!63 | |ontology_enrichment_uberon=UBERON:0000468!2.34e-13!659;UBERON:0000481!2.72e-12!347;UBERON:0000062!6.71e-12!511;UBERON:0004923!7.79e-12!57;UBERON:0003104!2.30e-11!238;UBERON:0009142!2.30e-11!238;UBERON:0000467!5.55e-11!625;UBERON:0000475!8.49e-11!365;UBERON:0002100!8.66e-11!216;UBERON:0000480!1.06e-10!626;UBERON:0003102!1.30e-09!95;UBERON:0005631!1.47e-09!14;UBERON:0000158!1.47e-09!14;UBERON:0000486!3.16e-09!82;UBERON:0000064!5.71e-09!219;UBERON:0005256!6.92e-09!143;UBERON:0000926!8.38e-09!448;UBERON:0004120!8.38e-09!448;UBERON:0006603!8.38e-09!448;UBERON:0000923!9.11e-09!604;UBERON:0005291!9.11e-09!604;UBERON:0006598!9.11e-09!604;UBERON:0002532!9.11e-09!604;UBERON:0002050!9.44e-09!605;UBERON:0005423!9.44e-09!605;UBERON:0000914!1.54e-08!83;UBERON:0002329!1.54e-08!83;UBERON:0003077!1.54e-08!83;UBERON:0003059!1.54e-08!83;UBERON:0007282!1.54e-08!83;UBERON:0009618!1.54e-08!83;UBERON:0007285!1.54e-08!83;UBERON:0000922!1.70e-08!612;UBERON:0001444!3.16e-08!48;UBERON:0004290!3.62e-08!70;UBERON:0004119!1.50e-07!169;UBERON:0000925!1.50e-07!169;UBERON:0006595!1.50e-07!169;UBERON:0001134!7.10e-07!61;UBERON:0002036!7.10e-07!61;UBERON:0003082!7.10e-07!61;UBERON:0000478!8.32e-07!24;UBERON:0002385!8.72e-07!63;UBERON:0001015!8.72e-07!63;UBERON:0000383!8.72e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0004923;3.13e-07;55!UBERON:0005631;4.71e-07;10!UBERON:0000158;4.71e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,5.69e-13,66;UBERON:0002100,4.07e-10,199;UBERON:0003102,9.47e-10,99;UBERON:0005631,1.15e-09,14;UBERON:0000158,1.15e-09,14;UBERON:0000486,1.56e-09,83;UBERON:0003104,1.74e-08,160;UBERON:0009142,1.74e-08,160;UBERON:0002329,1.85e-08,71;UBERON:0003059,1.85e-08,71;UBERON:0007282,1.85e-08,71;UBERON:0004290,1.85e-08,71;UBERON:0009618,1.85e-08,71;UBERON:0003077,3.44e-08,72;UBERON:0007285,3.44e-08,72;UBERON:0007524,3.54e-08,73;UBERON:0001444,5.06e-08,49;UBERON:0007503,1.56e-07,78;UBERON:0001134,3.82e-07,62;UBERON:0002036,3.82e-07,62;UBERON:0003082,3.82e-07,62;UBERON:0002385,4.73e-07,64;UBERON:0001015,4.73e-07,64;UBERON:0000383,4.73e-07,64;UBERON:0000033,5.67e-07,56;UBERON:0005256,9.82e-07,122 | |||
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|short_description=p1@PTGES | |short_description=p1@PTGES | ||
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Latest revision as of 23:20, 15 September 2015
Short description: | p1@PTGES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTGES_5end |
Coexpression cluster: | C4804_Placental_amniotic_Smooth_chorionic_Amniotic_Mesothelial_Fibroblast |
Association with transcript: | 0bp_to_ENST00000340607_5end |
EntrezGene: | PTGES |
HGNC: | 9599 |
UniProt: | O14684 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.96e-08 | 58 |
myoblast | 6.96e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.96e-08 | 58 |
muscle cell | 8.03e-08 | 55 |
extraembryonic cell | 1.77e-07 | 19 |
fibroblast | 6.92e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 5.69e-13 | 66 |
trunk | 4.07e-10 | 199 |
surface structure | 9.47e-10 | 99 |
extraembryonic membrane | 1.15e-09 | 14 |
membranous layer | 1.15e-09 | 14 |
multilaminar epithelium | 1.56e-09 | 83 |
mesenchyme | 1.74e-08 | 160 |
entire embryonic mesenchyme | 1.74e-08 | 160 |
somite | 1.85e-08 | 71 |
presomitic mesoderm | 1.85e-08 | 71 |
presumptive segmental plate | 1.85e-08 | 71 |
dermomyotome | 1.85e-08 | 71 |
trunk paraxial mesoderm | 1.85e-08 | 71 |
paraxial mesoderm | 3.44e-08 | 72 |
presumptive paraxial mesoderm | 3.44e-08 | 72 |
dense mesenchyme tissue | 3.54e-08 | 73 |
subdivision of head | 5.06e-08 | 49 |
epithelial vesicle | 1.56e-07 | 78 |
skeletal muscle tissue | 3.82e-07 | 62 |
striated muscle tissue | 3.82e-07 | 62 |
myotome | 3.82e-07 | 62 |
muscle tissue | 4.73e-07 | 64 |
musculature | 4.73e-07 | 64 |
musculature of body | 4.73e-07 | 64 |
head | 5.67e-07 | 56 |
trunk mesenchyme | 9.82e-07 | 122 |