FFCP PHASE1:Hg19::chr9:132641675..132641684,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10868 | |EntrezGene=10868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12619 | |HGNC=12619 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_uc004byu.1_5end | |association_with_transcript=22bp_to_uc004byu.1_5end | ||
|cluster_id=chr9:132641675..132641684,+ | |||
|description=CAGE_peak_10_at_USP20_5end | |description=CAGE_peak_10_at_USP20_5end | ||
|id=chr9:132641675..132641684,+ | |id=chr9:132641675..132641684,+ | ||
|ontology_enrichment_celltype=CL:0002274!2.73e-22!5;CL:0000457!2.73e-22!5;CL:0002191!2.73e-22!5;CL:0000097!2.73e-22!5;CL:0000831!2.73e-22!5;CL:0002028!2.73e-22!5;CL:0000763!8.74e-18!112;CL:0000049!8.74e-18!112;CL:0000764!1.57e-14!2;CL:0000765!1.57e-14!2;CL:0000050!1.57e-14!2;CL:0000038!1.57e-14!2;CL:0000558!1.57e-14!2;CL:0000547!1.57e-14!2;CL:0000549!1.57e-14!2;CL:0000550!1.57e-14!2;CL:0000552!1.57e-14!2;CL:0000163!1.82e-12!9;CL:0002032!2.81e-12!165;CL:0000837!2.81e-12!165;CL:0000037!1.28e-11!172;CL:0000566!1.28e-11!172;CL:0000988!9.07e-11!182 | |ontology_enrichment_celltype=CL:0002274!2.73e-22!5;CL:0000457!2.73e-22!5;CL:0002191!2.73e-22!5;CL:0000097!2.73e-22!5;CL:0000831!2.73e-22!5;CL:0002028!2.73e-22!5;CL:0000763!8.74e-18!112;CL:0000049!8.74e-18!112;CL:0000764!1.57e-14!2;CL:0000765!1.57e-14!2;CL:0000050!1.57e-14!2;CL:0000038!1.57e-14!2;CL:0000558!1.57e-14!2;CL:0000547!1.57e-14!2;CL:0000549!1.57e-14!2;CL:0000550!1.57e-14!2;CL:0000552!1.57e-14!2;CL:0000163!1.82e-12!9;CL:0002032!2.81e-12!165;CL:0000837!2.81e-12!165;CL:0000037!1.28e-11!172;CL:0000566!1.28e-11!172;CL:0000988!9.07e-11!182 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.77e-18;5!CL:0000764;2.74e-12;2!CL:0000558;2.74e-12;2!CL:0000163;1.02e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.48e-18,5;CL:0002028,1.48e-18,5;CL:0000763,9.65e-13,108;CL:0000049,9.65e-13,108;CL:0000764,2.59e-12,2;CL:0000765,2.59e-12,2;CL:0000050,2.59e-12,2;CL:0000038,2.59e-12,2;CL:0000558,2.59e-12,2;CL:0000547,2.59e-12,2;CL:0000549,2.59e-12,2;CL:0000550,2.59e-12,2;CL:0000552,2.59e-12,2;CL:0000163,9.23e-11,9;CL:0002032,1.74e-08,161;CL:0000837,1.74e-08,161;CL:0000037,4.03e-08,168;CL:0000988,1.08e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!4.22e-29!8;DOID:8692!5.32e-29!31;DOID:1240!1.35e-22!39;DOID:2531!9.38e-17!51;DOID:0060083!9.38e-17!51;DOID:9119!3.11e-08!1;DOID:8552!6.19e-08!1 | |ontology_enrichment_disease=DOID:1036!4.22e-29!8;DOID:8692!5.32e-29!31;DOID:1240!1.35e-22!39;DOID:2531!9.38e-17!51;DOID:0060083!9.38e-17!51;DOID:9119!3.11e-08!1;DOID:8552!6.19e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.42e-17;31!DOID:1240;3.49e-12;39!DOID:2531;1.92e-09;51!DOID:0060083;1.92e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.67e-18,31;DOID:1240,2.45e-14,39;DOID:2531,5.20e-11,51;DOID:0060083,5.20e-11,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528290604079356,1.86595303986695,0.576479813667846,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,3.99158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,1.23087398947712,2.97501246323581,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0.451191321234361,0.19606253431774,0.167821586975843,2.27704479269022,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528290604079356,1.86595303986695,0.576479813667846,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,3.99158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,1.23087398947712,2.97501246323581,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0.451191321234361,0.19606253431774,0.167821586975843,2.27704479269022,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p10@USP20 | |short_description=p10@USP20 | ||
}} | }} |
Latest revision as of 23:46, 15 September 2015
Short description: | p10@USP20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_USP20_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_uc004byu.1_5end |
EntrezGene: | USP20 |
HGNC: | 12619 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.48e-18 | 5 |
basophil mast progenitor cell | 1.48e-18 | 5 |
myeloid cell | 9.65e-13 | 108 |
common myeloid progenitor | 9.65e-13 | 108 |
erythroid lineage cell | 2.59e-12 | 2 |
erythroblast | 2.59e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 2.59e-12 | 2 |
erythroid progenitor cell | 2.59e-12 | 2 |
reticulocyte | 2.59e-12 | 2 |
proerythroblast | 2.59e-12 | 2 |
basophilic erythroblast | 2.59e-12 | 2 |
polychromatophilic erythroblast | 2.59e-12 | 2 |
orthochromatic erythroblast | 2.59e-12 | 2 |
endocrine cell | 9.23e-11 | 9 |
hematopoietic oligopotent progenitor cell | 1.74e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.74e-08 | 161 |
hematopoietic stem cell | 4.03e-08 | 168 |
hematopoietic cell | 1.08e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.67e-18 | 31 |
leukemia | 2.45e-14 | 39 |
hematologic cancer | 5.20e-11 | 51 |
immune system cancer | 5.20e-11 | 51 |