FFCP PHASE2:Hg19::chr12:93963818..93963840,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8835 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:19382 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=19382 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A8K3D1,O14508 | ||
|association_with_transcript=220bp_to_NM_003877,uc001tcw.1_5end | |association_with_transcript=220bp_to_NM_003877,uc001tcw.1_5end | ||
|cluster_id=chr12:93963818..93963840,+ | |cluster_id=chr12:93963818..93963840,+ |
Latest revision as of 00:06, 16 September 2015
Short description: | p18@SOCS2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SOCS2_5end |
Coexpression cluster: | C167_Basophils_Mast_Eosinophils_Neutrophils_Peripheral_Whole_CD4 |
Association with transcript: | 220bp_to_NM_003877, uc001tcw.1_5end |
EntrezGene: | SOCS2 |
HGNC: | 19382 |
UniProt: | A8K3D1O14508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p18@SOCS2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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granulocyte | 2.81e-45 | 8 |
blood cell | 7.22e-33 | 11 |
basophil | 2.40e-31 | 3 |
eosinophil | 1.88e-21 | 2 |
myeloid cell | 1.52e-09 | 108 |
common myeloid progenitor | 1.52e-09 | 108 |
mast cell | 5.28e-09 | 5 |
basophil mast progenitor cell | 5.28e-09 | 5 |
myeloid leukocyte | 6.16e-08 | 72 |
hematopoietic cell | 1.57e-07 | 177 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
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primary palate mesenchyme | 2.68e-11 | 1 |
pneumatized bone | 2.68e-11 | 1 |
subdivision of skeleton | 2.68e-11 | 1 |
intramembranous bone | 2.68e-11 | 1 |
head bone | 2.68e-11 | 1 |
dermal bone | 2.68e-11 | 1 |
irregular bone | 2.68e-11 | 1 |
mesenchyme derived from head neural crest | 2.68e-11 | 1 |
facial mesenchyme | 2.68e-11 | 1 |
head or neck bone | 2.68e-11 | 1 |
Showing 1 to 10 of 39 entries