FFCP PHASE1:Hg19::chr1:1109255..1109268,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=254173 | |EntrezGene=254173 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26693 | |HGNC=26693 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000506177_5end | |association_with_transcript=0bp_to_ENST00000506177_5end | ||
|cluster_id=chr1:1109255..1109268,+ | |||
|coexpression_cluster_id=C111 | |coexpression_cluster_id=C111 | ||
|description=CAGE_peak_2_at_TTLL10_5end | |description=CAGE_peak_2_at_TTLL10_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.28e-11;10!UBERON:0005564;6.28e-11;10!UBERON:0008947;2.05e-08;29 | |ontology_enrichment_development_v019=UBERON:0009117;6.28e-11;10!UBERON:0005564;6.28e-11;10!UBERON:0008947;2.05e-08;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!1.21e-19!3;UBERON:0005290!1.21e-19!3;UBERON:0010096!1.21e-19!3;UBERON:0007023!7.66e-18!115;UBERON:0003127!3.50e-14!2;UBERON:0001873!9.83e-14!2;UBERON:0010122!9.83e-14!2;UBERON:0002298!6.45e-13!8;UBERON:0005383!1.89e-09!3;UBERON:0005382!1.89e-09!3;UBERON:0001049!5.01e-09!57;UBERON:0005068!5.01e-09!57;UBERON:0006241!5.01e-09!57;UBERON:0007135!5.01e-09!57;UBERON:0002616!1.14e-08!59;UBERON:0004733!1.19e-08!12;UBERON:0002028!1.19e-08!12;UBERON:0007277!1.19e-08!12;UBERON:0002171!4.89e-08!1;UBERON:0006518!4.89e-08!1;UBERON:0008949!4.89e-08!1;UBERON:0000101!4.89e-08!1;UBERON:0002167!4.89e-08!1;UBERON:0004732!5.42e-08!13;UBERON:0002336!1.15e-07!1;UBERON:0001018!1.15e-07!1;UBERON:0002473!1.15e-07!1;UBERON:0005340!1.15e-07!1;UBERON:0002316!1.15e-07!1;UBERON:0003544!1.15e-07!1;UBERON:0001020!1.15e-07!1;UBERON:0005970!1.15e-07!1;UBERON:0002437!1.15e-07!1;UBERON:0001301!1.22e-07!1;UBERON:0003112!2.04e-07!1;UBERON:0000032!2.04e-07!1;UBERON:0005253!2.04e-07!1;UBERON:0003128!2.04e-07!1;UBERON:0002241!2.04e-07!1;UBERON:0001703!2.04e-07!1;UBERON:0004761!2.04e-07!1;UBERON:0009617!2.04e-07!1;UBERON:0000369!2.72e-07!4;UBERON:0002435!2.72e-07!4;UBERON:0000204!2.72e-07!4;UBERON:0010082!2.72e-07!4;UBERON:0002902!3.17e-07!1;UBERON:0009899!3.17e-07!1;UBERON:0000955!4.56e-07!69;UBERON:0006238!4.56e-07!69;UBERON:0003076!6.16e-07!15;UBERON:0003057!6.16e-07!15;UBERON:0002308!6.71e-07!9;UBERON:0000125!6.71e-07!9 | |ontology_enrichment_uberon=UBERON:0001896!1.21e-19!3;UBERON:0005290!1.21e-19!3;UBERON:0010096!1.21e-19!3;UBERON:0007023!7.66e-18!115;UBERON:0003127!3.50e-14!2;UBERON:0001873!9.83e-14!2;UBERON:0010122!9.83e-14!2;UBERON:0002298!6.45e-13!8;UBERON:0005383!1.89e-09!3;UBERON:0005382!1.89e-09!3;UBERON:0001049!5.01e-09!57;UBERON:0005068!5.01e-09!57;UBERON:0006241!5.01e-09!57;UBERON:0007135!5.01e-09!57;UBERON:0002616!1.14e-08!59;UBERON:0004733!1.19e-08!12;UBERON:0002028!1.19e-08!12;UBERON:0007277!1.19e-08!12;UBERON:0002171!4.89e-08!1;UBERON:0006518!4.89e-08!1;UBERON:0008949!4.89e-08!1;UBERON:0000101!4.89e-08!1;UBERON:0002167!4.89e-08!1;UBERON:0004732!5.42e-08!13;UBERON:0002336!1.15e-07!1;UBERON:0001018!1.15e-07!1;UBERON:0002473!1.15e-07!1;UBERON:0005340!1.15e-07!1;UBERON:0002316!1.15e-07!1;UBERON:0003544!1.15e-07!1;UBERON:0001020!1.15e-07!1;UBERON:0005970!1.15e-07!1;UBERON:0002437!1.15e-07!1;UBERON:0001301!1.22e-07!1;UBERON:0003112!2.04e-07!1;UBERON:0000032!2.04e-07!1;UBERON:0005253!2.04e-07!1;UBERON:0003128!2.04e-07!1;UBERON:0002241!2.04e-07!1;UBERON:0001703!2.04e-07!1;UBERON:0004761!2.04e-07!1;UBERON:0009617!2.04e-07!1;UBERON:0000369!2.72e-07!4;UBERON:0002435!2.72e-07!4;UBERON:0000204!2.72e-07!4;UBERON:0010082!2.72e-07!4;UBERON:0002902!3.17e-07!1;UBERON:0009899!3.17e-07!1;UBERON:0000955!4.56e-07!69;UBERON:0006238!4.56e-07!69;UBERON:0003076!6.16e-07!15;UBERON:0003057!6.16e-07!15;UBERON:0002308!6.71e-07!9;UBERON:0000125!6.71e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;4.61e-26;1!UBERON:0006518;4.61e-26;1!UBERON:0008949;4.61e-26;1!UBERON:0000101;4.61e-26;1!UBERON:0002167;4.61e-26;1!UBERON:0003127;7.30e-14;2!UBERON:0000473;2.07e-13;8!UBERON:0003135;5.06e-10;11!UBERON:0001896;1.30e-09;3!UBERON:0005290;1.30e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0002171;4.61e-26;1!UBERON:0006518;4.61e-26;1!UBERON:0008949;4.61e-26;1!UBERON:0000101;4.61e-26;1!UBERON:0002167;4.61e-26;1!UBERON:0003127;7.30e-14;2!UBERON:0000473;2.07e-13;8!UBERON:0003135;5.06e-10;11!UBERON:0001896;1.30e-09;3!UBERON:0005290;1.30e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.58e-26,1;UBERON:0006518,3.58e-26,1;UBERON:0008949,3.58e-26,1;UBERON:0000101,3.58e-26,1;UBERON:0002167,3.58e-26,1;UBERON:0003127,7.30e-14,2;UBERON:0000473,1.94e-13,8;UBERON:0003135,4.83e-10,11;UBERON:0001896,1.41e-09,3;UBERON:0005290,1.41e-09,3;UBERON:0010096,1.41e-09,3;UBERON:0005178,2.83e-07,34;UBERON:0002224,2.83e-07,34;UBERON:0005181,4.39e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0.533937062838473,2.35806457649499,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0,0,2.29363678276028,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81868875723775,4.28742608249886,0,0,0,0.476128862927481,0,0,0,0,0,0,0,0,3.15577703727776,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0.533937062838473,2.35806457649499,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0,0,2.29363678276028,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81868875723775,4.28742608249886,0,0,0,0.476128862927481,0,0,0,0,0,0,0,0,3.15577703727776,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@TTLL10 | |short_description=p2@TTLL10 | ||
}} | }} |
Latest revision as of 00:42, 16 September 2015
Short description: | p2@TTLL10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TTLL10_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000506177_5end |
EntrezGene: | TTLL10 |
HGNC: | 26693 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.58e-26 | 1 |
right lung lobe | 3.58e-26 | 1 |
lower lobe of lung | 3.58e-26 | 1 |
lobe of lung | 3.58e-26 | 1 |
right lung | 3.58e-26 | 1 |
open tracheal system trachea | 7.30e-14 | 2 |
testis | 1.94e-13 | 8 |
male reproductive organ | 4.83e-10 | 11 |
medulla oblongata | 1.41e-09 | 3 |
myelencephalon | 1.41e-09 | 3 |
future myelencephalon | 1.41e-09 | 3 |
thoracic cavity element | 2.83e-07 | 34 |
thoracic cavity | 2.83e-07 | 34 |
thoracic segment organ | 4.39e-07 | 35 |