FFCP PHASE1:Hg19::chr8:124408713..124408724,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:124408713..124408724,-
|short_description=p3@ATAD2
|description=CAGE_peak_3_at_ATAD2_5end
|association_with_transcript=-8bp_to_ENST00000287394,NM_014109,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29028 | |EntrezGene=29028 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30123 | |HGNC=30123 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PL18 | |UniProt=Q6PL18 | ||
|association_with_transcript=-8bp_to_ENST00000287394,NM_014109,uc003yqh.3,uc003yqj.2_5end | |||
|cluster_id=chr8:124408713..124408724,- | |||
|description=CAGE_peak_3_at_ATAD2_5end | |||
|id=chr8:124408713..124408724,- | |||
|ontology_enrichment_celltype=CL:0000037!3.29e-23!172;CL:0000566!3.29e-23!172;CL:0000988!7.53e-22!182;CL:0002032!1.66e-21!165;CL:0000837!1.66e-21!165;CL:0000542!2.67e-21!53;CL:0000051!2.67e-21!53;CL:0000838!1.05e-20!52;CL:0002087!1.64e-12!119;CL:0000738!9.72e-12!140;CL:0002031!1.17e-11!124;CL:0000084!2.02e-11!25;CL:0000827!2.02e-11!25;CL:0000945!2.54e-09!24;CL:0000826!2.54e-09!24;CL:0000791!8.85e-08!18;CL:0000789!8.85e-08!18;CL:0002420!8.85e-08!18;CL:0002419!8.85e-08!18;CL:0000790!8.85e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.76e-14;53!CL:0000084;1.70e-13;25!CL:0000945;1.10e-10;24!CL:0000791;1.21e-08;18!CL:0000789;1.21e-08;18!CL:0002419;1.21e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.47e-26,168;CL:0000988,3.56e-26,177;CL:0000542,1.85e-25,53;CL:0000051,1.85e-25,53;CL:0000838,1.14e-24,52;CL:0002032,1.15e-23,161;CL:0000837,1.15e-23,161;CL:0000084,1.33e-13,25;CL:0000827,1.33e-13,25;CL:0002087,2.48e-12,115;CL:0000738,7.36e-12,136;CL:0002031,5.89e-11,120;CL:0000945,1.28e-10,24;CL:0000826,1.28e-10,24;CL:0000791,9.86e-09,18;CL:0000789,9.86e-09,18;CL:0002420,9.86e-09,18;CL:0002419,9.86e-09,18;CL:0000790,9.86e-09,18;CL:0000134,3.38e-07,354;CL:0000219,4.60e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000051;1.76e-14;53!CL:0000790;1.21e-08;18 | |||
|ontology_enrichment_disease=DOID:162!7.51e-32!235;DOID:14566!9.31e-31!239;DOID:2531!1.10e-24!51;DOID:0060083!1.10e-24!51;DOID:0050686!1.57e-23!137;DOID:1240!1.63e-19!39;DOID:8692!1.01e-14!31;DOID:305!1.18e-11!106;DOID:0050687!3.32e-11!143;DOID:0060058!6.34e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.27e-19;39!DOID:2531;1.36e-19;51!DOID:0060083;1.36e-19;51!DOID:8692;8.61e-19;31!DOID:0060058;7.28e-09;10!DOID:1036;8.93e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.00e-32,51;DOID:0060083,3.00e-32,51;DOID:162,8.41e-28,235;DOID:14566,8.55e-27,239;DOID:1240,6.47e-26,39;DOID:0050686,5.02e-23,137;DOID:8692,2.38e-19,31;DOID:0060058,6.54e-09,10;DOID:305,1.31e-08,106;DOID:0050687,1.16e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.77e-07,371 | |||
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| ||
|short_description=p3@ATAD2 | |||
}} | }} |
Latest revision as of 00:51, 16 September 2015
Short description: | p3@ATAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATAD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000287394, NM_014109, uc003yqh.3, uc003yqj.2_5end |
EntrezGene: | ATAD2 |
HGNC: | 30123 |
UniProt: | Q6PL18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.47e-26 | 168 |
hematopoietic cell | 3.56e-26 | 177 |
lymphocyte | 1.85e-25 | 53 |
common lymphoid progenitor | 1.85e-25 | 53 |
lymphoid lineage restricted progenitor cell | 1.14e-24 | 52 |
hematopoietic oligopotent progenitor cell | 1.15e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-23 | 161 |
T cell | 1.33e-13 | 25 |
pro-T cell | 1.33e-13 | 25 |
nongranular leukocyte | 2.48e-12 | 115 |
leukocyte | 7.36e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 5.89e-11 | 120 |
lymphocyte of B lineage | 1.28e-10 | 24 |
pro-B cell | 1.28e-10 | 24 |
mature alpha-beta T cell | 9.86e-09 | 18 |
alpha-beta T cell | 9.86e-09 | 18 |
immature T cell | 9.86e-09 | 18 |
mature T cell | 9.86e-09 | 18 |
immature alpha-beta T cell | 9.86e-09 | 18 |
mesenchymal cell | 3.38e-07 | 354 |
motile cell | 4.60e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.77e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.00e-32 | 51 |
immune system cancer | 3.00e-32 | 51 |
cancer | 8.41e-28 | 235 |
disease of cellular proliferation | 8.55e-27 | 239 |
leukemia | 6.47e-26 | 39 |
organ system cancer | 5.02e-23 | 137 |
myeloid leukemia | 2.38e-19 | 31 |
lymphoma | 6.54e-09 | 10 |
carcinoma | 1.31e-08 | 106 |
cell type cancer | 1.16e-07 | 143 |