FFCP PHASE1:Hg19::chr6:148761434..148761452,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:148761434..148761452,+ to FFCP PHASE1:Hg19::chr6:148761434..148761452,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23328 | |EntrezGene=23328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19182 | |HGNC=19182 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-41bp_to_ENST00000470750_5end | |||
|cluster_id=chr6:148761434..148761452,+ | |||
|description=CAGE_peak_11_at_SASH1_5end | |||
|id=chr6:148761434..148761452,+ | |||
|ontology_enrichment_celltype=CL:0002620!2.18e-25!23;CL:0000057!1.44e-22!75;CL:0002556!2.09e-10!6;CL:0000055!2.30e-10!180;CL:0002552!1.87e-09!5;CL:0002551!1.84e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.74e-21;23!CL:0002556;6.44e-20;6!CL:0002552;7.04e-18;5!CL:0000057;1.11e-11;73!CL:0000135;3.42e-10;3!CL:0000388;3.42e-10;3!CL:0000153;6.72e-09;9!CL:0000447;6.72e-09;9!CL:0002561;7.12e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.76e-25,76;CL:0002620,1.21e-21,23;CL:0002556,6.50e-20,6;CL:0002552,6.19e-18,5;CL:0000135,2.74e-10,3;CL:0000388,2.74e-10,3;CL:0000153,7.34e-09,9;CL:0000447,7.34e-09,9;CL:0002561,7.77e-08,2;CL:0000134,5.80e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!7.59e-09!5;DOID:450!7.59e-09!5;DOID:66!7.59e-09!5;DOID:423!7.59e-09!5;DOID:0080000!7.59e-09!5;DOID:11722!7.59e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;8.47e-17;5!DOID:450;8.47e-17;5!DOID:66;8.47e-17;5!DOID:423;8.47e-17;5!DOID:0080000;8.47e-17;5!DOID:11722;8.47e-17;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.13e-16,5;DOID:450,1.13e-16,5;DOID:66,1.13e-16,5;DOID:423,1.13e-16,5;DOID:0080000,1.13e-16,5;DOID:11722,1.13e-16,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.26e-19!95;UBERON:0002097!5.98e-18!40;UBERON:0002199!4.56e-15!45;UBERON:0002416!4.56e-15!45;UBERON:0001758!2.09e-10!6;UBERON:0003672!2.09e-10!6;UBERON:0001950!2.17e-10!20;UBERON:0000475!1.03e-09!365;UBERON:0002619!3.64e-09!22;UBERON:0000075!4.36e-09!13;UBERON:0005944!4.36e-09!13;UBERON:0004288!4.36e-09!13;UBERON:0003089!4.36e-09!13;UBERON:0000165!2.87e-08!28;UBERON:0000930!2.87e-08!28;UBERON:0000200!2.91e-08!6;UBERON:0000956!1.07e-07!25;UBERON:0000203!1.07e-07!25;UBERON:0001893!2.16e-07!34;UBERON:0002067!2.86e-07!9;UBERON:0004016!2.86e-07!9;UBERON:0010083!2.86e-07!9;UBERON:0001869!3.87e-07!32;UBERON:0003129!4.88e-07!11;UBERON:0002791!8.04e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;6.44e-20;6!UBERON:0003672;6.44e-20;6!UBERON:0003129;5.70e-17;7!UBERON:0002097;3.96e-15;41!UBERON:0011137;2.28e-14;11!UBERON:0010323;2.28e-14;11!UBERON:0000165;1.26e-12;28!UBERON:0002199;5.66e-12;46!UBERON:0002416;5.66e-12;46!UBERON:0001434;2.88e-11;36!UBERON:0001828;5.07e-11;8!UBERON:0007846;3.42e-10;3!UBERON:0000043;3.42e-10;3!UBERON:0007845;3.42e-10;3!UBERON:0000075;1.56e-09;16!UBERON:0003102;4.94e-09;50!UBERON:0005933;7.12e-08;2!UBERON:0005942;7.12e-08;2!UBERON:0005932;7.12e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.62e-21,99;UBERON:0001758,6.50e-20,6;UBERON:0003672,6.50e-20,6;UBERON:0002097,4.68e-19,41;UBERON:0003129,5.74e-17,7;UBERON:0002199,1.62e-16,46;UBERON:0002416,1.62e-16,46;UBERON:0000165,1.30e-14,29;UBERON:0000930,1.30e-14,29;UBERON:0010323,2.31e-14,11;UBERON:0001828,4.69e-11,8;UBERON:0011137,4.78e-11,14;UBERON:0007846,2.74e-10,3;UBERON:0000043,2.74e-10,3;UBERON:0007845,2.74e-10,3;UBERON:0000075,1.58e-09,16;UBERON:0001444,7.33e-09,49;UBERON:0005933,7.77e-08,2;UBERON:0005942,7.77e-08,2;UBERON:0005932,7.77e-08,2;UBERON:0000153,1.74e-07,62;UBERON:0007811,1.74e-07,62;UBERON:0000033,2.15e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.866364470720326,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53007406669196,3.00802746381534,3.0417768981773,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0.624320153660641,2.85235910772225,1.49448680551801,0.822041490506354,0.647491777472526,0.140450806702248,9.79940022023488,2.45668634623536,6.71617577642475,9.50402285825643,5.68713937340681,0,0,2.35670559535693,1.50142223846357,4.98715407871529,3.5118209670467,2.14541457059314,6.30999847407706,0,4.12596162084383,3.63047560991565,3.60284231971255,1.20036438433761,2.16410311400722,9.27505944164265,3.35010341396862,1.85653965465393,0.974370051611986,4.79624171063818,2.30124746605748,0.161646056818812,1.77504796258307,0.403008392910561,0.67824236924195,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,4.17931135228781,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.514414748524284,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,1.91699884393266,2.29723871668228,0,0.144781306667579,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0.271265023699736,0,0.892144943985809,1.10391690523754,0.117141414992713,1.20378439891088,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0.30239029332968,0,0.460385919864187,0,0.128139149255701,0.511707249066704,0,0,0,0,0.164254312027618,0,0,0,0,0,0.114814448164607,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0.322260734604821,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05553817648832,1.64647446479951,0.75894634753143,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22896305723383,0.894704431569664,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,8.5698014597915,0,0.19924798825107,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14834370736859,0,0,0,0,0,0,0,0,0,0,0,0,0.859930162358083,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.886351143382302,0,0,0,0,0,0,0,0,1.73953549791606,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0.104909176269996,19.4304619195708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48083010905975,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0.610131324509816,1.6274820991845,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89403005275089,1.50940741051545,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.46422264857641,0,0.513833800771676,0,0.798169295285756,0.41023272848151,0,0.691572524642179,0,1.42769420259154,0,0,0,0,0,0.690359926060101,2.18807844327902,0,0,0,0,0,0,0.135075169236789,1.56215619722769,1.03343398250592,0.760989722326882,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.526182188502793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.971421986118279,0,1.39265542612958,0,0,0,0.150962843566674,0.231522474323834,0,0,0,0,0,0,0,0.339854229375634,2.16163011353663,5.9301256935691,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.611923411718232,0,1.5870805215462,1.48798007266701,3.23522940041993,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.193766729508018,1.42771842880473,0,0,0.202117188958219,0.217716747896961,0,0.202056159043763,0.430333232356058,0.332660356546013,0,0,0,0,0,0,0,0,1.00636896795513,0 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| ||
|short_description=p11@SASH1 | |||
}} | }} |
Latest revision as of 01:01, 16 September 2015
Short description: | p11@SASH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SASH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -41bp_to_ENST00000470750_5end |
EntrezGene: | SASH1 |
HGNC: | 19182 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.76e-25 | 76 |
skin fibroblast | 1.21e-21 | 23 |
fibroblast of periodontium | 6.50e-20 | 6 |
fibroblast of gingiva | 6.19e-18 | 5 |
fibrocyte | 2.74e-10 | 3 |
tendon cell | 2.74e-10 | 3 |
GAG secreting cell | 7.34e-09 | 9 |
carbohydrate secreting cell | 7.34e-09 | 9 |
outer root sheath cell | 7.77e-08 | 2 |
mesenchymal cell | 5.80e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.62e-21 | 99 |
periodontium | 6.50e-20 | 6 |
dentition | 6.50e-20 | 6 |
skin of body | 4.68e-19 | 41 |
skull | 5.74e-17 | 7 |
integument | 1.62e-16 | 46 |
integumental system | 1.62e-16 | 46 |
mouth | 1.30e-14 | 29 |
stomodeum | 1.30e-14 | 29 |
cranial skeletal system | 2.31e-14 | 11 |
gingiva | 4.69e-11 | 8 |
axial skeletal system | 4.78e-11 | 14 |
dense regular connective tissue | 2.74e-10 | 3 |
tendon | 2.74e-10 | 3 |
regular connective tissue | 2.74e-10 | 3 |
subdivision of skeletal system | 1.58e-09 | 16 |
subdivision of head | 7.33e-09 | 49 |
hair root sheath | 7.77e-08 | 2 |
hair outer root sheath | 7.77e-08 | 2 |
bulb of hair follicle | 7.77e-08 | 2 |
anterior region of body | 1.74e-07 | 62 |
craniocervical region | 1.74e-07 | 62 |
head | 2.15e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.13e-16 | 5 |
myotonic disease | 1.13e-16 | 5 |
muscle tissue disease | 1.13e-16 | 5 |
myopathy | 1.13e-16 | 5 |
muscular disease | 1.13e-16 | 5 |
myotonic dystrophy | 1.13e-16 | 5 |