FFCP PHASE1:Hg19::chr2:10442993..10443051,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3241 | |EntrezGene=3241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5145 | |HGNC=5145 | ||
|TSSclassifier=strong | |||
|UniProt=P37235,C9JW46,O75544,Q6FGY1 | |UniProt=P37235,C9JW46,O75544,Q6FGY1 | ||
|association_with_transcript=0bp_to_ENST00000307845,ENST00000423674,NM_002149,uc002raj.2,uc002rak.2_5end | |association_with_transcript=0bp_to_ENST00000307845,ENST00000423674,NM_002149,uc002raj.2,uc002rak.2_5end | ||
|cluster_id=chr2:10442993..10443051,+ | |||
|description=CAGE_peak_1_at_HPCAL1_5end | |description=CAGE_peak_1_at_HPCAL1_5end | ||
|id=chr2:10442993..10443051,+ | |id=chr2:10442993..10443051,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.22e-12!76;CL:0000557!1.07e-09!71;CL:0002194!1.27e-09!63;CL:0000576!1.27e-09!63;CL:0000040!1.27e-09!63;CL:0000559!1.27e-09!63;CL:0000839!3.37e-09!70;CL:0002009!2.12e-08!65;CL:0000115!2.94e-08!35;CL:0002078!1.57e-07!44 | |ontology_enrichment_celltype=CL:0000766!1.22e-12!76;CL:0000557!1.07e-09!71;CL:0002194!1.27e-09!63;CL:0000576!1.27e-09!63;CL:0000040!1.27e-09!63;CL:0000559!1.27e-09!63;CL:0000839!3.37e-09!70;CL:0002009!2.12e-08!65;CL:0000115!2.94e-08!35;CL:0002078!1.57e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.83e-07;36!CL:0000473;9.09e-07;39!CL:0000234;9.09e-07;39 | |ontology_enrichment_celltype_v019=CL:0000115;1.83e-07;36!CL:0000473;9.09e-07;39!CL:0000234;9.09e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.99e-13,72;CL:0000557,2.41e-10,67;CL:0002194,2.43e-10,59;CL:0000576,2.43e-10,59;CL:0000040,2.43e-10,59;CL:0000559,2.43e-10,59;CL:0000839,8.04e-10,66;CL:0002009,5.21e-09,61;CL:0000115,1.03e-08,36;CL:0000473,1.16e-08,48;CL:0000234,1.16e-08,48;CL:0002078,6.06e-08,45;CL:0000763,5.47e-07,108;CL:0000049,5.47e-07,108;CL:0000213,5.58e-07,58;CL:0000215,5.58e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.72e-12!112;UBERON:0002390!1.77e-11!102;UBERON:0003061!1.77e-11!102;UBERON:0002371!8.98e-11!80;UBERON:0001474!4.83e-10!86;UBERON:0004765!4.92e-10!101;UBERON:0001434!4.92e-10!101;UBERON:0002405!1.62e-09!115 | |ontology_enrichment_uberon=UBERON:0002193!2.72e-12!112;UBERON:0002390!1.77e-11!102;UBERON:0003061!1.77e-11!102;UBERON:0002371!8.98e-11!80;UBERON:0001474!4.83e-10!86;UBERON:0004765!4.92e-10!101;UBERON:0001434!4.92e-10!101;UBERON:0002405!1.62e-09!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.02e-13,108;UBERON:0002390,5.05e-12,98;UBERON:0003061,5.05e-12,98;UBERON:0002405,1.33e-11,93;UBERON:0002371,2.05e-11,76;UBERON:0001434,1.01e-10,100;UBERON:0001474,1.33e-10,82;UBERON:0004765,6.30e-10,90 | |||
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| ||
|short_description=p1@HPCAL1 | |short_description=p1@HPCAL1 | ||
}} | }} |
Latest revision as of 03:08, 16 September 2015
Short description: | p1@HPCAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HPCAL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000307845, ENST00000423674, NM_002149, uc002raj.2, uc002rak.2_5end |
EntrezGene: | HPCAL1 |
HGNC: | 5145 |
UniProt: | P37235C9JW46O75544Q6FGY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.99e-13 | 72 |
granulocyte monocyte progenitor cell | 2.41e-10 | 67 |
monopoietic cell | 2.43e-10 | 59 |
monocyte | 2.43e-10 | 59 |
monoblast | 2.43e-10 | 59 |
promonocyte | 2.43e-10 | 59 |
myeloid lineage restricted progenitor cell | 8.04e-10 | 66 |
macrophage dendritic cell progenitor | 5.21e-09 | 61 |
endothelial cell | 1.03e-08 | 36 |
defensive cell | 1.16e-08 | 48 |
phagocyte | 1.16e-08 | 48 |
meso-epithelial cell | 6.06e-08 | 45 |
myeloid cell | 5.47e-07 | 108 |
common myeloid progenitor | 5.47e-07 | 108 |
lining cell | 5.58e-07 | 58 |
barrier cell | 5.58e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.02e-13 | 108 |
hematopoietic system | 5.05e-12 | 98 |
blood island | 5.05e-12 | 98 |
immune system | 1.33e-11 | 93 |
bone marrow | 2.05e-11 | 76 |
skeletal system | 1.01e-10 | 100 |
bone element | 1.33e-10 | 82 |
skeletal element | 6.30e-10 | 90 |