FFCP PHASE1:Hg19::chr12:107349627..107349664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90488 | |EntrezGene=90488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28281 | |HGNC=28281 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000550344_5end | |association_with_transcript=0bp_to_ENST00000550344_5end | ||
|cluster_id=chr12:107349627..107349664,+ | |||
|description=CAGE_peak_2_at_C12orf23_5end | |description=CAGE_peak_2_at_C12orf23_5end | ||
|id=chr12:107349627..107349664,+ | |id=chr12:107349627..107349664,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.92e-21!180;CL:0000057!5.98e-15!75;CL:0000680!7.58e-12!57;CL:0000056!7.58e-12!57;CL:0000355!7.58e-12!57;CL:0000187!2.64e-11!54;CL:0000183!7.27e-10!59;CL:0000192!2.65e-08!42;CL:0000514!2.65e-08!42;CL:0000393!7.33e-08!60;CL:0000211!7.33e-08!60;CL:0002620!9.33e-07!23 | |ontology_enrichment_celltype=CL:0000055!3.92e-21!180;CL:0000057!5.98e-15!75;CL:0000680!7.58e-12!57;CL:0000056!7.58e-12!57;CL:0000355!7.58e-12!57;CL:0000187!2.64e-11!54;CL:0000183!7.27e-10!59;CL:0000192!2.65e-08!42;CL:0000514!2.65e-08!42;CL:0000393!7.33e-08!60;CL:0000211!7.33e-08!60;CL:0002620!9.33e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000187;2.93e-07;55!CL:0000499;3.44e-07;28!CL:0000134;3.88e-07;55!CL:0002620;8.87e-07;23!CL:0000723;9.40e-07;61 | |ontology_enrichment_celltype_v019=CL:0000187;2.93e-07;55!CL:0000499;3.44e-07;28!CL:0000134;3.88e-07;55!CL:0002620;8.87e-07;23!CL:0000723;9.40e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.71e-15,76;CL:0000680,4.77e-12,58;CL:0000056,4.77e-12,58;CL:0000355,4.77e-12,58;CL:0000187,1.67e-11,55;CL:0000192,1.70e-08,43;CL:0000514,1.70e-08,43;CL:0000393,4.78e-08,61;CL:0000211,4.78e-08,61;CL:0000499,3.52e-07,28;CL:0002620,9.32e-07,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.13e-16!83;UBERON:0002329!2.13e-16!83;UBERON:0003077!2.13e-16!83;UBERON:0003059!2.13e-16!83;UBERON:0007282!2.13e-16!83;UBERON:0009618!2.13e-16!83;UBERON:0007285!2.13e-16!83;UBERON:0004290!5.29e-13!70;UBERON:0005256!2.30e-12!143;UBERON:0002100!5.13e-12!216;UBERON:0000486!7.67e-12!82;UBERON:0001134!2.93e-11!61;UBERON:0002036!2.93e-11!61;UBERON:0003082!2.93e-11!61;UBERON:0002385!6.74e-11!63;UBERON:0001015!6.74e-11!63;UBERON:0000383!6.74e-11!63;UBERON:0003104!8.05e-11!238;UBERON:0009142!8.05e-11!238;UBERON:0000481!1.32e-09!347;UBERON:0000490!3.77e-08!138;UBERON:0000475!8.25e-08!365 | |ontology_enrichment_uberon=UBERON:0000914!2.13e-16!83;UBERON:0002329!2.13e-16!83;UBERON:0003077!2.13e-16!83;UBERON:0003059!2.13e-16!83;UBERON:0007282!2.13e-16!83;UBERON:0009618!2.13e-16!83;UBERON:0007285!2.13e-16!83;UBERON:0004290!5.29e-13!70;UBERON:0005256!2.30e-12!143;UBERON:0002100!5.13e-12!216;UBERON:0000486!7.67e-12!82;UBERON:0001134!2.93e-11!61;UBERON:0002036!2.93e-11!61;UBERON:0003082!2.93e-11!61;UBERON:0002385!6.74e-11!63;UBERON:0001015!6.74e-11!63;UBERON:0000383!6.74e-11!63;UBERON:0003104!8.05e-11!238;UBERON:0009142!8.05e-11!238;UBERON:0000481!1.32e-09!347;UBERON:0000490!3.77e-08!138;UBERON:0000475!8.25e-08!365 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,3.31e-13,71;UBERON:0003059,3.31e-13,71;UBERON:0007282,3.31e-13,71;UBERON:0004290,3.31e-13,71;UBERON:0009618,3.31e-13,71;UBERON:0007524,3.75e-13,73;UBERON:0003077,1.13e-12,72;UBERON:0007285,1.13e-12,72;UBERON:0003104,2.12e-12,160;UBERON:0009142,2.12e-12,160;UBERON:0000486,4.71e-12,83;UBERON:0001134,1.85e-11,62;UBERON:0002036,1.85e-11,62;UBERON:0003082,1.85e-11,62;UBERON:0007503,2.45e-11,78;UBERON:0002385,4.27e-11,64;UBERON:0001015,4.27e-11,64;UBERON:0000383,4.27e-11,64;UBERON:0005256,5.28e-11,122;UBERON:0000490,8.99e-10,148;UBERON:0002100,1.33e-09,199;UBERON:0004923,9.47e-07,66 | |||
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| ||
|short_description=p2@C12orf23 | |short_description=p2@C12orf23 | ||
}} | }} |
Latest revision as of 03:15, 16 September 2015
Short description: | p2@C12orf23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C12orf23_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000550344_5end |
EntrezGene: | C12orf23 |
HGNC: | 28281 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.71e-15 | 76 |
muscle precursor cell | 4.77e-12 | 58 |
myoblast | 4.77e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.77e-12 | 58 |
muscle cell | 1.67e-11 | 55 |
smooth muscle cell | 1.70e-08 | 43 |
smooth muscle myoblast | 1.70e-08 | 43 |
electrically responsive cell | 4.78e-08 | 61 |
electrically active cell | 4.78e-08 | 61 |
stromal cell | 3.52e-07 | 28 |
skin fibroblast | 9.32e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
somite | 3.31e-13 | 71 |
presomitic mesoderm | 3.31e-13 | 71 |
presumptive segmental plate | 3.31e-13 | 71 |
dermomyotome | 3.31e-13 | 71 |
trunk paraxial mesoderm | 3.31e-13 | 71 |
dense mesenchyme tissue | 3.75e-13 | 73 |
paraxial mesoderm | 1.13e-12 | 72 |
presumptive paraxial mesoderm | 1.13e-12 | 72 |
mesenchyme | 2.12e-12 | 160 |
entire embryonic mesenchyme | 2.12e-12 | 160 |
multilaminar epithelium | 4.71e-12 | 83 |
skeletal muscle tissue | 1.85e-11 | 62 |
striated muscle tissue | 1.85e-11 | 62 |
myotome | 1.85e-11 | 62 |
epithelial vesicle | 2.45e-11 | 78 |
muscle tissue | 4.27e-11 | 64 |
musculature | 4.27e-11 | 64 |
musculature of body | 4.27e-11 | 64 |
trunk mesenchyme | 5.28e-11 | 122 |
unilaminar epithelium | 8.99e-10 | 148 |
trunk | 1.33e-09 | 199 |
organ component layer | 9.47e-07 | 66 |