FFCP PHASE1:Hg19::chr12:96429349..96429381,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4048 | |EntrezGene=4048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6710 | |HGNC=6710 | ||
|TSSclassifier=strong | |||
|UniProt=P09960 | |UniProt=P09960 | ||
|association_with_transcript=0bp_to_NM_000895,uc001ten.1,uc010sva.1_5end | |association_with_transcript=0bp_to_NM_000895,uc001ten.1,uc010sva.1_5end | ||
|cluster_id=chr12:96429349..96429381,- | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_1_at_LTA4H_5end | |description=CAGE_peak_1_at_LTA4H_5end | ||
|id=chr12:96429349..96429381,- | |id=chr12:96429349..96429381,- | ||
|ontology_enrichment_celltype=CL:0002194!3.35e-28!63;CL:0000576!3.35e-28!63;CL:0000040!3.35e-28!63;CL:0000559!3.35e-28!63;CL:0000860!4.44e-27!45;CL:0002057!1.35e-26!42;CL:0002087!4.74e-26!119;CL:0002009!6.88e-26!65;CL:0000766!1.19e-23!76;CL:0000738!9.08e-23!140;CL:0000839!5.07e-20!70;CL:0000557!5.43e-20!71;CL:0002031!8.80e-18!124;CL:0000037!2.31e-16!172;CL:0000566!2.31e-16!172;CL:0002032!8.87e-15!165;CL:0000837!8.87e-15!165;CL:0000988!9.21e-14!182;CL:0000763!6.17e-13!112;CL:0000049!6.17e-13!112;CL:0000236!2.65e-07!14 | |ontology_enrichment_celltype=CL:0002194!3.35e-28!63;CL:0000576!3.35e-28!63;CL:0000040!3.35e-28!63;CL:0000559!3.35e-28!63;CL:0000860!4.44e-27!45;CL:0002057!1.35e-26!42;CL:0002087!4.74e-26!119;CL:0002009!6.88e-26!65;CL:0000766!1.19e-23!76;CL:0000738!9.08e-23!140;CL:0000839!5.07e-20!70;CL:0000557!5.43e-20!71;CL:0002031!8.80e-18!124;CL:0000037!2.31e-16!172;CL:0000566!2.31e-16!172;CL:0002032!8.87e-15!165;CL:0000837!8.87e-15!165;CL:0000988!9.21e-14!182;CL:0000763!6.17e-13!112;CL:0000049!6.17e-13!112;CL:0000236!2.65e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.78e-20;39!CL:0000234;8.78e-20;39!CL:0000860;1.66e-19;33!CL:0002057;1.66e-19;33!CL:0000576;5.62e-17;48!CL:0000766;3.17e-11;69!CL:0000236;9.66e-08;13!CL:0002087;1.76e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.09e-30,48;CL:0000234,1.09e-30,48;CL:0002194,2.12e-28,59;CL:0000576,2.12e-28,59;CL:0000040,2.12e-28,59;CL:0000559,2.12e-28,59;CL:0000860,1.35e-26,42;CL:0002057,1.35e-26,42;CL:0002009,5.58e-26,61;CL:0002087,9.37e-26,115;CL:0000766,1.47e-23,72;CL:0000738,2.13e-22,136;CL:0000839,6.77e-20,66;CL:0000557,7.40e-20,67;CL:0002031,2.00e-17,120;CL:0000037,5.83e-16,168;CL:0002032,2.18e-14,161;CL:0000837,2.18e-14,161;CL:0000988,8.33e-14,177;CL:0000763,1.37e-12,108;CL:0000049,1.37e-12,108;CL:0000236,2.65e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;3.53e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.16e-20!102;UBERON:0003061!8.16e-20!102;UBERON:0002193!9.57e-19!112;UBERON:0002371!1.05e-15!80;UBERON:0001474!1.79e-14!86;UBERON:0004765!7.36e-12!101;UBERON:0001434!7.36e-12!101;UBERON:0002405!2.46e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.61e-19,98;UBERON:0003061,1.61e-19,98;UBERON:0002193,2.04e-18,108;UBERON:0004765,2.31e-16,90;UBERON:0002371,1.93e-15,76;UBERON:0002405,4.61e-15,93;UBERON:0001474,3.55e-14,82;UBERON:0001434,3.00e-12,100 | |||
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| ||
|short_description=p1@LTA4H | |short_description=p1@LTA4H | ||
}} | }} |
Latest revision as of 03:17, 16 September 2015
Short description: | p1@LTA4H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LTA4H_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 0bp_to_NM_000895, uc001ten.1, uc010sva.1_5end |
EntrezGene: | LTA4H |
HGNC: | 6710 |
UniProt: | P09960 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.09e-30 | 48 |
phagocyte | 1.09e-30 | 48 |
monopoietic cell | 2.12e-28 | 59 |
monocyte | 2.12e-28 | 59 |
monoblast | 2.12e-28 | 59 |
promonocyte | 2.12e-28 | 59 |
classical monocyte | 1.35e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-26 | 42 |
macrophage dendritic cell progenitor | 5.58e-26 | 61 |
nongranular leukocyte | 9.37e-26 | 115 |
myeloid leukocyte | 1.47e-23 | 72 |
leukocyte | 2.13e-22 | 136 |
myeloid lineage restricted progenitor cell | 6.77e-20 | 66 |
granulocyte monocyte progenitor cell | 7.40e-20 | 67 |
hematopoietic lineage restricted progenitor cell | 2.00e-17 | 120 |
hematopoietic stem cell | 5.83e-16 | 168 |
hematopoietic oligopotent progenitor cell | 2.18e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-14 | 161 |
hematopoietic cell | 8.33e-14 | 177 |
myeloid cell | 1.37e-12 | 108 |
common myeloid progenitor | 1.37e-12 | 108 |
B cell | 2.65e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.61e-19 | 98 |
blood island | 1.61e-19 | 98 |
hemolymphoid system | 2.04e-18 | 108 |
skeletal element | 2.31e-16 | 90 |
bone marrow | 1.93e-15 | 76 |
immune system | 4.61e-15 | 93 |
bone element | 3.55e-14 | 82 |
skeletal system | 3.00e-12 | 100 |