FFCP PHASE1:Hg19::chr12:107486857..107486873,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1407 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2384 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=417bp_to_ENST00000550633_5end | |||
|cluster_id=chr12:107486857..107486873,- | |||
|description=CAGE_peak_10_at_CRY1_5end | |||
|id=chr12:107486857..107486873,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;3.28e-23;1!CL:0002625;3.28e-23;1!CL:0000216;3.28e-23;1!CL:0002615;1.21e-08;3!CL:0000775;1.21e-08;3!CL:0000306;8.61e-07;4!CL:0002222;8.61e-07;4!CL:0002224;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.10e-23,1;CL:0002625,2.10e-23,1;CL:0000216,2.10e-23,1;CL:0000775,1.21e-08,3;CL:0002615,1.51e-08,3;CL:0000306,9.11e-07,4;CL:0002222,9.11e-07,4;CL:0002224,9.11e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.59e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.85e-12,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;3.28e-23;1!UBERON:0001343;3.28e-23;1!UBERON:0004910;3.28e-23;1!UBERON:0004813;3.28e-23;1!UBERON:0004909;2.59e-12;2!UBERON:0000473;4.54e-12;8!UBERON:0003135;4.90e-09;11!UBERON:0010077;8.61e-07;4!UBERON:0005389;8.61e-07;4!UBERON:0005904;8.61e-07;4!UBERON:0000484;8.61e-07;4!UBERON:0000965;8.61e-07;4!UBERON:0001803;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.10e-23,1;UBERON:0001343,2.10e-23,1;UBERON:0004910,2.10e-23,1;UBERON:0005154,2.10e-23,1;UBERON:0005295,2.10e-23,1;UBERON:0004813,2.10e-23,1;UBERON:0005297,2.10e-23,1;UBERON:0005294,2.10e-23,1;UBERON:0010141,2.10e-23,1;UBERON:0005891,2.10e-23,1;UBERON:0004909,2.07e-12,2;UBERON:0000473,4.18e-12,8;UBERON:0003135,4.61e-09,11;UBERON:0005904,7.70e-07,4;UBERON:0010077,9.11e-07,4;UBERON:0005389,9.11e-07,4;UBERON:0000484,9.11e-07,4;UBERON:0002546,9.11e-07,4;UBERON:0000965,9.11e-07,4;UBERON:0001803,9.11e-07,4;UBERON:0003073,9.11e-07,4;UBERON:0005426,9.11e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.290796477559129,0,0,0,0,0.619412741790207,0,0,0,0.689491361473237,0,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0.962787081228281,1.27867425159808,0,0.199463657621632,0,0.290209238628584,0,0,0.75374599577023,0.521482918420201,0.65156653411535,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.786021525498329,0.205601498999509,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,1.06976078313403,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,2.46331618947972,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641715181398742,0.254094624222463,0,0,0.502548796003046,0,0,0,1.24324654030811,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0.568272293612826,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0.552567831062295,0.251932747854276,0,0,0.311039587661807,0.0898683511473268,0,0,0.295930216910801,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0.694499979733169,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0.461701551022782,0,0,0.628303510868405,0,0,0.366390373607449,0,0,0.156980256395025,0,0,0.19606253431774,0.167821586975843,0,0,0.421996129056054,0,0,0,0,0.265372693510018,0.611030144933625,0.593042257361244,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0.698906672968121,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.176512253383001,0,0,0,0,0,0,0.640358984218058,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0.482259445395058,0.275078873194468,0,0.674921674654501,0,0,0.335434687599266,0,0.157363764404994,0,0,0,0,0,0,0,0,0,1.19730191562487,0.328370082997356,0,0,0,0,0,0,0,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0.157054096250234,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.144921028610825,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0.157265941855896,0,0,0.212574920101683,0.371807292777007,0,0,0.0788617450012534,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0.11796972334774,0,0,0,0.690359926060101,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0.351742488719241,0,0,0,0,0.455324382702595,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0.22910686854405,0.31020638566432,0,0,0.098150233615243,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0.594092800654172,0,0.169927114687817,0,0,0.0999411559249289,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0.252332849670158,0,0,0,0,0.36757959813938,0.250707539292375,2.27336094654718,0.803892390468535,0,0,0.213233981900981,0,0.581300188524055,0.496597714366863,0,0.25458863311266,0.202117188958219,0,0,0,0.0717222053926763,0.332660356546013,0.162806537221949,0.106727345877715,1.9307228228694,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p10@CRY1 | |||
}} |
Latest revision as of 03:24, 16 September 2015
Short description: | p10@CRY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CRY1_5end |
Coexpression cluster: | NA |
Association with transcript: | 417bp_to_ENST00000550633_5end |
EntrezGene: | CRY1 |
HGNC: | 2384 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.10e-23 | 1 |
seminiferous tubule epithelial cell | 2.10e-23 | 1 |
Sertoli cell | 2.10e-23 | 1 |
neutrophil | 1.21e-08 | 3 |
adipocyte of omentum tissue | 1.51e-08 | 3 |
crystallin accumulating cell | 9.11e-07 | 4 |
vertebrate lens cell | 9.11e-07 | 4 |
lens epithelial cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.10e-23 | 1 |
seminiferous tubule of testis | 2.10e-23 | 1 |
epithelium of male gonad | 2.10e-23 | 1 |
epithelial cord | 2.10e-23 | 1 |
sex cord | 2.10e-23 | 1 |
seminiferous tubule epithelium | 2.10e-23 | 1 |
testis sex cord | 2.10e-23 | 1 |
genital ridge | 2.10e-23 | 1 |
primitive sex cord of indifferent gonad | 2.10e-23 | 1 |
coelomic epithelium | 2.10e-23 | 1 |
epithelium of gonad | 2.07e-12 | 2 |
testis | 4.18e-12 | 8 |
male reproductive organ | 4.61e-09 | 11 |
duct of male reproductive system | 7.70e-07 | 4 |
cuboidal epithelium | 9.11e-07 | 4 |
transparent eye structure | 9.11e-07 | 4 |
simple cuboidal epithelium | 9.11e-07 | 4 |
cranial placode | 9.11e-07 | 4 |
lens of camera-type eye | 9.11e-07 | 4 |
epithelium of lens | 9.11e-07 | 4 |
lens placode | 9.11e-07 | 4 |
lens vesicle | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.85e-12 | 2 |