FFCP PHASE1:Hg19::chr8:126448982..126449004,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10221 | |EntrezGene=10221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16891 | |HGNC=16891 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-229bp_to_AK001319,AK022787_5end | |association_with_transcript=-229bp_to_AK001319,AK022787_5end | ||
|cluster_id=chr8:126448982..126449004,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_9_at_TRIB1_5end | |description=CAGE_peak_9_at_TRIB1_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.76e-25!42;CL:0000860!1.14e-23!45;CL:0002009!1.75e-23!65;CL:0000766!3.67e-23!76;CL:0002194!2.71e-22!63;CL:0000576!2.71e-22!63;CL:0000040!2.71e-22!63;CL:0000559!2.71e-22!63;CL:0000557!3.19e-20!71;CL:0000839!1.65e-18!70;CL:0000763!5.27e-14!112;CL:0000049!5.27e-14!112;CL:0000738!1.16e-12!140;CL:0002087!2.76e-10!119;CL:0002031!2.16e-09!124;CL:0002032!1.03e-07!165;CL:0000837!1.03e-07!165;CL:0000037!2.17e-07!172;CL:0000566!2.17e-07!172 | |ontology_enrichment_celltype=CL:0002057!1.76e-25!42;CL:0000860!1.14e-23!45;CL:0002009!1.75e-23!65;CL:0000766!3.67e-23!76;CL:0002194!2.71e-22!63;CL:0000576!2.71e-22!63;CL:0000040!2.71e-22!63;CL:0000559!2.71e-22!63;CL:0000557!3.19e-20!71;CL:0000839!1.65e-18!70;CL:0000763!5.27e-14!112;CL:0000049!5.27e-14!112;CL:0000738!1.16e-12!140;CL:0002087!2.76e-10!119;CL:0002031!2.16e-09!124;CL:0002032!1.03e-07!165;CL:0000837!1.03e-07!165;CL:0000037!2.17e-07!172;CL:0000566!2.17e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000473;7.95e-28;39!CL:0000234;7.95e-28;39!CL:0000860;3.34e-27;33!CL:0002057;3.34e-27;33!CL:0000576;1.74e-18;48!CL:0000766;9.55e-18;69!CL:0000775;3.50e-13;3!CL:0000094;1.95e-08;8!CL:0000763;2.99e-07;100 | |ontology_enrichment_celltype_v019=CL:0000473;7.95e-28;39!CL:0000234;7.95e-28;39!CL:0000860;3.34e-27;33!CL:0002057;3.34e-27;33!CL:0000576;1.74e-18;48!CL:0000766;9.55e-18;69!CL:0000775;3.50e-13;3!CL:0000094;1.95e-08;8!CL:0000763;2.99e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.10e-37,48;CL:0000234,3.10e-37,48;CL:0000766,1.60e-32,72;CL:0000860,2.84e-32,42;CL:0002057,2.84e-32,42;CL:0002009,4.12e-30,61;CL:0002194,1.37e-28,59;CL:0000576,1.37e-28,59;CL:0000040,1.37e-28,59;CL:0000559,1.37e-28,59;CL:0000557,6.58e-27,67;CL:0000839,5.53e-25,66;CL:0000763,3.35e-21,108;CL:0000049,3.35e-21,108;CL:0000738,8.86e-17,136;CL:0002087,2.93e-13,115;CL:0000775,3.52e-13,3;CL:0002031,1.72e-12,120;CL:0000037,2.91e-12,168;CL:0002032,5.27e-12,161;CL:0000837,5.27e-12,161;CL:0000988,2.72e-11,177;CL:0000094,1.89e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.76e-22;42 | |ontology_enrichment_development_v019=CL:0002057;3.76e-22;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.04e-16!80;UBERON:0001474!3.90e-16!86;UBERON:0002390!6.23e-16!102;UBERON:0003061!6.23e-16!102;UBERON:0002193!3.77e-14!112;UBERON:0002405!4.45e-14!115;UBERON:0004765!5.79e-13!101;UBERON:0001434!5.79e-13!101 | |ontology_enrichment_uberon=UBERON:0002371!1.04e-16!80;UBERON:0001474!3.90e-16!86;UBERON:0002390!6.23e-16!102;UBERON:0003061!6.23e-16!102;UBERON:0002193!3.77e-14!112;UBERON:0002405!4.45e-14!115;UBERON:0004765!5.79e-13!101;UBERON:0001434!5.79e-13!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.58e-23,98;UBERON:0003061,1.58e-23,98;UBERON:0002371,4.82e-23,76;UBERON:0001474,5.65e-23,82;UBERON:0002193,1.00e-20,108;UBERON:0004765,2.14e-20,90;UBERON:0002405,8.89e-18,93;UBERON:0001434,9.38e-18,100;UBERON:0003081,1.44e-10,203;UBERON:0002204,2.77e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.527533956456907,0,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0.305653622991805,0.328402357799783,0.0787107813136792,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0.369754010166788,0.0774672005803016,0.284338464974843,0,1.10799081706375,3.00816671205213,2.17010870715852,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0.242584061187816,0.697287110717054,2.46700732813095,1.85823822537062,6.32923263108731,3.84241059793651,5.91205574721463,2.75796544589295,0.645484683583826,1.35426486594342,0.941211697713023,0.818718450173537,0.674170453335254,2.14258724659632,0.641858054152187,2.55734850319616,1.64925650093358,1.59570926097305,5.54092175692502,1.7412554317715,0.56738522469114,0,8.54245461872927,9.38669253156363,6.29847649644838,0.605399502633369,0.368277635987565,0.632924774881769,0.422510572623884,0.637812899895131,0.419317291016752,0.336985893439485,1.35159203557356,0.16072558669708,0.570025487482497,0.19891667719909,0.547992461293902,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0.886135578334485,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.378139268656271,0.221729397462564,0.263504357079378,0.0654895377488563,0,0.370784442784429,0.324547393654683,0.348259474598534,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52054421143703,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0.169560592310488,0.386521706326594,0,0,0.609868530647977,0.397589304964456,0.580969714347592,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0.168584690078102,0,0.330881918197182,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.491953754172454,0,0.109750285408626,0,0.201057944823262,0.277765335475589,0,0,0,0.115930404975077,0,0.288732895522148,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0.144119953416961,0,0,0,0,0,0.205654985406647,0.600686115687835,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,3.64871341923571,1.00451418286425,6.32501818449095,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0.167516265334349,1.27587750330633,17.9761685747324,23.932916736322,3.72973962092432,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.473107245101804,0.117141414992713,0,0,0,0,0,0,0,0,0,1.2942852049117,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,1.55776328755086,0,0.483437798366489,0.200506470303285,0.0920809889358963,0,0.364182336013434,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.984043937099117,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,1.13929437434833,0.238231775457789,0,1.29694662238543,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0,0.313359791546046,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0.111443384277478,0,1.90995587790152,0,0.307160702099232,0,0,0,0.329607748453519,0,0.19924798825107,0.276283915531148,0.251932747854276,0.409074730008619,0.123084805461069,0,0.269605053441981,0,0,0,2.3948309234694,0,0,0,0,1.04171104434093,0.0874599999961957,0,0.1137934482855,1.27126825146383,0,0,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0,0,0.438770794307945,0.10893846351899,0.41827123283581,0.230850775511391,0.227884111694002,0,0.179515288819544,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,1.26598838716816,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0,0,0.104421949505455,0,0.802577647298789,0,0.547364367646998,0.391329237864179,0.242780379534093,0,0,0,0.189559738885464,0,0,0,0.330991955875499,0,0,0,0.277349346026277,0,0.391969589657511,0.0870592065804026,0,0,0.290268993867255,0,0,0.290967049465258,0.0882561266915003,0,0.274083849293502,0,0,0.391102765469606,0.0801588202515337,0,0.39961921916426,1.00863292007874,0,0,0.14405479798815,0.248505071130865,0,0,0,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0.858452096273142,0.223171457441873,0,0,0,0.315132729228895,0.412079291905832,0.404421263125109,0.590564889088493,0,0,0.408610218334727,0.803765742325096,0.687697182986169,2.07720169014593,0.449947783103001,1.5476039091159,0.0607495566580247,0.670869375198532,0.157611414598396,0.0524545881349981,0.105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| ||
|short_description=p9@TRIB1 | |short_description=p9@TRIB1 | ||
}} | }} |
Latest revision as of 03:39, 16 September 2015
Short description: | p9@TRIB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TRIB1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -229bp_to_AK001319, AK022787_5end |
EntrezGene: | TRIB1 |
HGNC: | 16891 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.10e-37 | 48 |
phagocyte | 3.10e-37 | 48 |
myeloid leukocyte | 1.60e-32 | 72 |
classical monocyte | 2.84e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.84e-32 | 42 |
macrophage dendritic cell progenitor | 4.12e-30 | 61 |
monopoietic cell | 1.37e-28 | 59 |
monocyte | 1.37e-28 | 59 |
monoblast | 1.37e-28 | 59 |
promonocyte | 1.37e-28 | 59 |
granulocyte monocyte progenitor cell | 6.58e-27 | 67 |
myeloid lineage restricted progenitor cell | 5.53e-25 | 66 |
myeloid cell | 3.35e-21 | 108 |
common myeloid progenitor | 3.35e-21 | 108 |
leukocyte | 8.86e-17 | 136 |
nongranular leukocyte | 2.93e-13 | 115 |
neutrophil | 3.52e-13 | 3 |
hematopoietic lineage restricted progenitor cell | 1.72e-12 | 120 |
hematopoietic stem cell | 2.91e-12 | 168 |
hematopoietic oligopotent progenitor cell | 5.27e-12 | 161 |
hematopoietic multipotent progenitor cell | 5.27e-12 | 161 |
hematopoietic cell | 2.72e-11 | 177 |
granulocyte | 1.89e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.58e-23 | 98 |
blood island | 1.58e-23 | 98 |
bone marrow | 4.82e-23 | 76 |
bone element | 5.65e-23 | 82 |
hemolymphoid system | 1.00e-20 | 108 |
skeletal element | 2.14e-20 | 90 |
immune system | 8.89e-18 | 93 |
skeletal system | 9.38e-18 | 100 |
lateral plate mesoderm | 1.44e-10 | 203 |
musculoskeletal system | 2.77e-08 | 167 |