FFCP PHASE1:Hg19::chr8:126448982..126449004,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:126448982..126449004,+
|short_description=p9@TRIB1
|description=CAGE_peak_9_at_TRIB1_5end
|association_with_transcript=-229bp_to_AK001319,AK022787_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10221 | |EntrezGene=10221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16891 | |HGNC=16891 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-229bp_to_AK001319,AK022787_5end | |||
|cluster_id=chr8:126448982..126449004,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_9_at_TRIB1_5end | |||
|id=chr8:126448982..126449004,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.76e-25!42;CL:0000860!1.14e-23!45;CL:0002009!1.75e-23!65;CL:0000766!3.67e-23!76;CL:0002194!2.71e-22!63;CL:0000576!2.71e-22!63;CL:0000040!2.71e-22!63;CL:0000559!2.71e-22!63;CL:0000557!3.19e-20!71;CL:0000839!1.65e-18!70;CL:0000763!5.27e-14!112;CL:0000049!5.27e-14!112;CL:0000738!1.16e-12!140;CL:0002087!2.76e-10!119;CL:0002031!2.16e-09!124;CL:0002032!1.03e-07!165;CL:0000837!1.03e-07!165;CL:0000037!2.17e-07!172;CL:0000566!2.17e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.95e-28;39!CL:0000234;7.95e-28;39!CL:0000860;3.34e-27;33!CL:0002057;3.34e-27;33!CL:0000576;1.74e-18;48!CL:0000766;9.55e-18;69!CL:0000775;3.50e-13;3!CL:0000094;1.95e-08;8!CL:0000763;2.99e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.10e-37,48;CL:0000234,3.10e-37,48;CL:0000766,1.60e-32,72;CL:0000860,2.84e-32,42;CL:0002057,2.84e-32,42;CL:0002009,4.12e-30,61;CL:0002194,1.37e-28,59;CL:0000576,1.37e-28,59;CL:0000040,1.37e-28,59;CL:0000559,1.37e-28,59;CL:0000557,6.58e-27,67;CL:0000839,5.53e-25,66;CL:0000763,3.35e-21,108;CL:0000049,3.35e-21,108;CL:0000738,8.86e-17,136;CL:0002087,2.93e-13,115;CL:0000775,3.52e-13,3;CL:0002031,1.72e-12,120;CL:0000037,2.91e-12,168;CL:0002032,5.27e-12,161;CL:0000837,5.27e-12,161;CL:0000988,2.72e-11,177;CL:0000094,1.89e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.76e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.04e-16!80;UBERON:0001474!3.90e-16!86;UBERON:0002390!6.23e-16!102;UBERON:0003061!6.23e-16!102;UBERON:0002193!3.77e-14!112;UBERON:0002405!4.45e-14!115;UBERON:0004765!5.79e-13!101;UBERON:0001434!5.79e-13!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.58e-23,98;UBERON:0003061,1.58e-23,98;UBERON:0002371,4.82e-23,76;UBERON:0001474,5.65e-23,82;UBERON:0002193,1.00e-20,108;UBERON:0004765,2.14e-20,90;UBERON:0002405,8.89e-18,93;UBERON:0001434,9.38e-18,100;UBERON:0003081,1.44e-10,203;UBERON:0002204,2.77e-08,167 | |||
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| ||
|short_description=p9@TRIB1 | |||
}} | }} |
Latest revision as of 03:39, 16 September 2015
Short description: | p9@TRIB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TRIB1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -229bp_to_AK001319, AK022787_5end |
EntrezGene: | TRIB1 |
HGNC: | 16891 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.10e-37 | 48 |
phagocyte | 3.10e-37 | 48 |
myeloid leukocyte | 1.60e-32 | 72 |
classical monocyte | 2.84e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.84e-32 | 42 |
macrophage dendritic cell progenitor | 4.12e-30 | 61 |
monopoietic cell | 1.37e-28 | 59 |
monocyte | 1.37e-28 | 59 |
monoblast | 1.37e-28 | 59 |
promonocyte | 1.37e-28 | 59 |
granulocyte monocyte progenitor cell | 6.58e-27 | 67 |
myeloid lineage restricted progenitor cell | 5.53e-25 | 66 |
myeloid cell | 3.35e-21 | 108 |
common myeloid progenitor | 3.35e-21 | 108 |
leukocyte | 8.86e-17 | 136 |
nongranular leukocyte | 2.93e-13 | 115 |
neutrophil | 3.52e-13 | 3 |
hematopoietic lineage restricted progenitor cell | 1.72e-12 | 120 |
hematopoietic stem cell | 2.91e-12 | 168 |
hematopoietic oligopotent progenitor cell | 5.27e-12 | 161 |
hematopoietic multipotent progenitor cell | 5.27e-12 | 161 |
hematopoietic cell | 2.72e-11 | 177 |
granulocyte | 1.89e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.58e-23 | 98 |
blood island | 1.58e-23 | 98 |
bone marrow | 4.82e-23 | 76 |
bone element | 5.65e-23 | 82 |
hemolymphoid system | 1.00e-20 | 108 |
skeletal element | 2.14e-20 | 90 |
immune system | 8.89e-18 | 93 |
skeletal system | 9.38e-18 | 100 |
lateral plate mesoderm | 1.44e-10 | 203 |
musculoskeletal system | 2.77e-08 | 167 |