FFCP PHASE1:Hg19::chr12:10875768..10875808,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8531 | |EntrezGene=8531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2428 | |HGNC=2428 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=97bp_to_ENST00000279550_5end | |association_with_transcript=97bp_to_ENST00000279550_5end | ||
|cluster_id=chr12:10875768..10875808,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_3_at_CSDA_5end | |description=CAGE_peak_3_at_CSDA_5end | ||
|id=chr12:10875768..10875808,- | |id=chr12:10875768..10875808,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.66e-10;33!CL:0002057;3.66e-10;33!CL:0000473;6.21e-07;39!CL:0000234;6.21e-07;39 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.65e-12!448;UBERON:0004120!4.65e-12!448;UBERON:0006603!4.65e-12!448;UBERON:0000468!1.36e-09!659;UBERON:0000922!7.54e-08!612;UBERON:0000923!5.41e-07!604;UBERON:0005291!5.41e-07!604;UBERON:0006598!5.41e-07!604;UBERON:0002532!5.41e-07!604;UBERON:0000467!6.44e-07!625;UBERON:0002050!8.46e-07!605;UBERON:0005423!8.46e-07!605 | |ontology_enrichment_uberon=UBERON:0000926!4.65e-12!448;UBERON:0004120!4.65e-12!448;UBERON:0006603!4.65e-12!448;UBERON:0000468!1.36e-09!659;UBERON:0000922!7.54e-08!612;UBERON:0000923!5.41e-07!604;UBERON:0005291!5.41e-07!604;UBERON:0006598!5.41e-07!604;UBERON:0002532!5.41e-07!604;UBERON:0000467!6.44e-07!625;UBERON:0002050!8.46e-07!605;UBERON:0005423!8.46e-07!605 | ||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.33e-07;11!UBERON:0003101;5.53e-07;22!UBERON:0000079;5.53e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.04e-10,315;UBERON:0004120,1.04e-10,315;UBERON:0006603,1.04e-10,315;UBERON:0003135,5.06e-08,11;UBERON:0003081,6.95e-08,203;UBERON:0000923,1.98e-07,560;UBERON:0010316,1.98e-07,560;UBERON:0005291,1.98e-07,560;UBERON:0006598,1.98e-07,560;UBERON:0010317,1.98e-07,560;UBERON:0002532,1.98e-07,560;UBERON:0003101,2.53e-07,22;UBERON:0000079,2.53e-07,22;UBERON:0002050,4.09e-07,564;UBERON:0000473,5.59e-07,8;UBERON:0000922,7.38e-07,592;UBERON:0007023,9.45e-07,114 | |||
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| ||
|short_description=p3@CSDA | |short_description=p3@CSDA | ||
}} | }} |
Latest revision as of 04:43, 16 September 2015
Short description: | p3@CSDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CSDA_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 97bp_to_ENST00000279550_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.04e-10 | 315 |
mesoderm-derived structure | 1.04e-10 | 315 |
presumptive mesoderm | 1.04e-10 | 315 |
male reproductive organ | 5.06e-08 | 11 |
lateral plate mesoderm | 6.95e-08 | 203 |
germ layer | 1.98e-07 | 560 |
germ layer / neural crest | 1.98e-07 | 560 |
embryonic tissue | 1.98e-07 | 560 |
presumptive structure | 1.98e-07 | 560 |
germ layer / neural crest derived structure | 1.98e-07 | 560 |
epiblast (generic) | 1.98e-07 | 560 |
male organism | 2.53e-07 | 22 |
male reproductive system | 2.53e-07 | 22 |
embryonic structure | 4.09e-07 | 564 |
testis | 5.59e-07 | 8 |
embryo | 7.38e-07 | 592 |
adult organism | 9.45e-07 | 114 |