FFCP PHASE1:Hg19::chr12:108991812..108991869,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338773 | |EntrezGene=338773 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27884 | |HGNC=27884 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFT9 | |UniProt=E9PFT9 | ||
|association_with_transcript=0bp_to_ENST00000433191_5end | |association_with_transcript=0bp_to_ENST00000433191_5end | ||
|cluster_id=chr12:108991812..108991869,- | |||
|coexpression_cluster_id=C2182 | |coexpression_cluster_id=C2182 | ||
|description=CAGE_peak_1_at_TMEM119_5end | |description=CAGE_peak_1_at_TMEM119_5end | ||
|id=chr12:108991812..108991869,- | |id=chr12:108991812..108991869,- | ||
|ontology_enrichment_celltype=CL:0000055!1.30e-31!180;CL:0000057!5.20e-25!75;CL:0002620!7.33e-13!23;CL:0000183!3.35e-10!59;CL:0000680!4.31e-10!57;CL:0000056!4.31e-10!57;CL:0000355!4.31e-10!57;CL:0000187!7.73e-10!54;CL:0002334!7.99e-09!12;CL:0000136!1.70e-08!15;CL:0000393!1.10e-07!60;CL:0000211!1.10e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.30e-31!180;CL:0000057!5.20e-25!75;CL:0002620!7.33e-13!23;CL:0000183!3.35e-10!59;CL:0000680!4.31e-10!57;CL:0000056!4.31e-10!57;CL:0000355!4.31e-10!57;CL:0000187!7.73e-10!54;CL:0002334!7.99e-09!12;CL:0000136!1.70e-08!15;CL:0000393!1.10e-07!60;CL:0000211!1.10e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.63e-13;23!CL:0000057;2.51e-10;73!CL:0002334;2.22e-09;12!CL:0002320;1.99e-07;188!CL:0000136;6.09e-07;13!CL:0002570;7.82e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.45e-25,76;CL:0002620,4.60e-13,23;CL:0000680,1.92e-09,58;CL:0000056,1.92e-09,58;CL:0000355,1.92e-09,58;CL:0002334,2.21e-09,12;CL:0000187,3.73e-09,55;CL:0000136,2.32e-08,15;CL:0000393,2.62e-07,61;CL:0000211,2.62e-07,61;CL:0002570,7.78e-07,8;CL:0000048,7.93e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.71e-20!365;UBERON:0000914!2.02e-19!83;UBERON:0002329!2.02e-19!83;UBERON:0003077!2.02e-19!83;UBERON:0003059!2.02e-19!83;UBERON:0007282!2.02e-19!83;UBERON:0009618!2.02e-19!83;UBERON:0007285!2.02e-19!83;UBERON:0004290!2.77e-15!70;UBERON:0003102!6.74e-14!95;UBERON:0002199!2.59e-12!45;UBERON:0002416!2.59e-12!45;UBERON:0000486!1.41e-11!82;UBERON:0002385!3.06e-11!63;UBERON:0001015!3.06e-11!63;UBERON:0000383!3.06e-11!63;UBERON:0000468!3.93e-11!659;UBERON:0001134!8.60e-11!61;UBERON:0002036!8.60e-11!61;UBERON:0003082!8.60e-11!61;UBERON:0000481!1.03e-10!347;UBERON:0000479!1.18e-10!787;UBERON:0001013!4.60e-10!14;UBERON:0007023!5.68e-10!115;UBERON:0002097!1.21e-09!40;UBERON:0005256!1.09e-08!143;UBERON:0000033!2.29e-08!123;UBERON:0000153!2.35e-08!129;UBERON:0007811!2.35e-08!129;UBERON:0002100!3.45e-07!216;UBERON:0002067!4.78e-07!9;UBERON:0004016!4.78e-07!9;UBERON:0010083!4.78e-07!9;UBERON:0000467!4.79e-07!625;UBERON:0002616!5.94e-07!59;UBERON:0000480!6.59e-07!626;UBERON:0004121!7.34e-07!169 | |ontology_enrichment_uberon=UBERON:0000475!2.71e-20!365;UBERON:0000914!2.02e-19!83;UBERON:0002329!2.02e-19!83;UBERON:0003077!2.02e-19!83;UBERON:0003059!2.02e-19!83;UBERON:0007282!2.02e-19!83;UBERON:0009618!2.02e-19!83;UBERON:0007285!2.02e-19!83;UBERON:0004290!2.77e-15!70;UBERON:0003102!6.74e-14!95;UBERON:0002199!2.59e-12!45;UBERON:0002416!2.59e-12!45;UBERON:0000486!1.41e-11!82;UBERON:0002385!3.06e-11!63;UBERON:0001015!3.06e-11!63;UBERON:0000383!3.06e-11!63;UBERON:0000468!3.93e-11!659;UBERON:0001134!8.60e-11!61;UBERON:0002036!8.60e-11!61;UBERON:0003082!8.60e-11!61;UBERON:0000481!1.03e-10!347;UBERON:0000479!1.18e-10!787;UBERON:0001013!4.60e-10!14;UBERON:0007023!5.68e-10!115;UBERON:0002097!1.21e-09!40;UBERON:0005256!1.09e-08!143;UBERON:0000033!2.29e-08!123;UBERON:0000153!2.35e-08!129;UBERON:0007811!2.35e-08!129;UBERON:0002100!3.45e-07!216;UBERON:0002067!4.78e-07!9;UBERON:0004016!4.78e-07!9;UBERON:0010083!4.78e-07!9;UBERON:0000467!4.79e-07!625;UBERON:0002616!5.94e-07!59;UBERON:0000480!6.59e-07!626;UBERON:0004121!7.34e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.06e-10;14!UBERON:0002385;9.01e-09;31!UBERON:0001015;9.01e-09;31!UBERON:0000383;9.01e-09;31!UBERON:0002199;1.32e-08;46!UBERON:0002416;1.32e-08;46!UBERON:0002384;1.55e-08;198!UBERON:0002204;1.98e-08;70!UBERON:0003102;3.18e-08;50!UBERON:0002097;4.78e-08;41!UBERON:0002067;1.81e-07;9!UBERON:0001434;6.05e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.48e-15,73;UBERON:0003077,6.08e-15,72;UBERON:0007285,6.08e-15,72;UBERON:0003102,6.56e-15,99;UBERON:0002329,8.40e-15,71;UBERON:0003059,8.40e-15,71;UBERON:0007282,8.40e-15,71;UBERON:0004290,8.40e-15,71;UBERON:0009618,8.40e-15,71;UBERON:0002199,1.98e-13,46;UBERON:0002416,1.98e-13,46;UBERON:0007503,1.74e-12,78;UBERON:0000479,2.16e-11,773;UBERON:0000486,2.59e-11,83;UBERON:0001013,1.02e-10,14;UBERON:0002385,1.19e-10,64;UBERON:0001015,1.19e-10,64;UBERON:0000383,1.19e-10,64;UBERON:0002097,1.50e-10,41;UBERON:0001134,3.50e-10,62;UBERON:0002036,3.50e-10,62;UBERON:0003082,3.50e-10,62;UBERON:0010314,5.82e-10,132;UBERON:0007023,2.41e-08,114;UBERON:0005256,1.34e-07,122;UBERON:0002067,1.80e-07,9;UBERON:0004016,1.80e-07,9;UBERON:0010083,1.80e-07,9;UBERON:0003104,3.01e-07,160;UBERON:0009142,3.01e-07,160;UBERON:0004457,6.85e-07,12;UBERON:0000042,6.85e-07,12 | |||
|phase1_expression=1082.07642693544,648.082285818006,577.349239177098,728.533612010789,861.740990055811,375.105565363159,400.213807505931,123.817095191659,228.015053418459,0.245733936501509,0.697801167972428,0.436882744260345,2.63766978228454,129.954670608049,79.8667675504277,21.5144046864568,22.2996975368871,30.6730237962697,26.8363039334779,3.93987385845721,13.2600449308764,2.5076377718247,2.0036519099174,0.410623275218653,7.03038781730896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25439401055856,3.88672399222775,10.5605982730016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,20.1210257911091,4.2194645408365,9.75885711438329,63.1685767401221,11.4428749979051,26.2444362526863,7.78615792484217,6.14476311566441,3.32594096193846,5.27008714158756,10.8057737285613,0,0,0,0,0,0,0,0,0,10.3228151412735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,143.624894039947,7.85109172320394,4.237093786023,101.827000365829,52.4909205653568,2.24271040056923,0,0.24666754841716,13.6932855575897,0.269421344139376,0.490385709340376,2.4217188423189,16.70910180992,33.7422861840667,142.344995034626,57.6176539759894,102.372346177984,68.6991817066025,101.656209063187,76.8265912661299,64.1044097740365,108.339867868979,128.433946001476,186.516448593282,152.316428435591,14.5625817910084,24.4330168217521,97.2982738654503,90.4606898674301,28.2605397793867,216.854944715134,197.991116086167,113.579972533387,0,55.0726181564806,170.418796277217,104.906291073983,57.6174904482052,75.5375039317757,55.6503566498559,127.862280299802,54.3459789816877,59.6314471586536,58.5646356246346,175.907356305434,93.4314208412733,114.31308879035,32.2406714328449,56.1245560547714,0,0,0,0.243947412259191,0,1.16193942869518,0.829288440122964,1.00928340350251,0,402.075298087627,593.711385952033,277.651191918486,131.41612363305,161.701003893987,0,0,0,0,0,0,0,0,0,0,1.40241773803446,27.5754587592038,119.077056222289,0,0,1.18157981336281,0,0,1.54411029268673,0,0,0.100528972411631,0,53.1067537655829,115.432761166033,0,1.62302566965108,11.6234607293463,0,0,0,0,0,0.984868024349589,2.57404691653161,9.80965671105606,1.87467667973554,0.839910640994298,0,0,0,0,0,0,1.65862492432618,0.288239906833923,0.88369703398466,2.28592419451809,0,0,20.5286935227246,3.59896224461632,0,0,0,0,0.22001485746285,2.58543431515556,1391.28357436382,62.552403689144,12.233153362904,14.5610411675913,67.1311246824191,2.83698264046557,21.313774321288,7.72081165753997,88.4473216788052,87.2634756987615,40.7170230367169,4.97548728239564,11.8792780940014,0,0,0,1.2162378064119,2.51128545716063,6.32501818449095,0.479249710983165,10.3375742250703,2.85273810081437,3.90909528002464,4.10952645100767,4.47652408099739,0,0,0,0,2.03275699377971,0,0,1.84267891867784,0,0,0,0,19.9987131502198,42.5144942900725,45.3012589578558,56.7760451979103,111.87497597582,80.2705292522728,25.5368284684115,190.197935027918,286.533455110541,69.3269577659783,38.5250847150553,62.3167789670957,119.030551821274,70.4884166865866,71.0306887288472,0,0,0,0,8.32177197552485,7.55975733324201,483.314009630977,178.783198880593,372.435945312689,180.676200450538,290.138010220821,120.157879094275,271.605061594334,67.3896361917605,95.8833316690886,81.1416301416434,22.3279404548957,74.8394837282138,0,0,0,12.2851459536129,34.2331395852628,46.1557940657173,0,0,0,0,0,0,0,0,0,1.08378575017541,2.50844886927427,0,0,0,0,0,0.769350375349168,0.984043937099117,0,7.00678879204511,316.097792552921,271.456254738734,5.74265537996172,5.20048196829217,0,41.2783967107361,37.1257167246293,65.0855580838789,48.3806369420702,126.541048454826,119.493755785324,77.8971374583162,69.8901479826888,0,0,0,0,4.18360994367557,13.8517432605482,4.1822236209636,0.308033580176089,0.532306030317022,13.9189278732012,0.18532421910392,0,11.5369094501497,27.2086305258104,8.38772853264829,95.7057739504389,66.3305431452577,21.6378208589637,0,99.6493415011564,45.5731469361851,50.7771454109909,0.202182481573316,3.17020642346017,2.10629228119491,44.8623039962423,0.487426979262569,0,32.0774791808767,64.1980661069856,46.3333278142995,2.75682671773062,0,0.438450885253763,59.0351044952021,130.52305565728,0,5.5768229657955,4.22543403798362,21.7985255350158,51.5807465318886,0,56.0522481231544,56.576846259774,124.144174645883,104.355122785572,118.277935442804,0,1.34060455107157,1.08890984861323,6.49592225359776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04383492638291,2.8853842595289,0,0,0,0,0,0.649243880549111,0,4.33645890163065,0.47003968731907,0,0,0,1.00899853595524,0,0,0,0,0,0,0,0,0,0,0,0,10.9881134453921,0,0,0,0,0,0,0.994147647766298,11.9569003948936,0.222617410045812,0,0,8.36841550654493,25.6944041443967,0,0,0.123084805461069,14.3078210324431,0,0,0,11.0480614313366,0,3.33410970433911,14.5399911914283,7.79252024559551,3.99227596002388,0,0,41.3249757997832,0,0,0,0,0,0,0.885741385813839,8.56234714240396,3.05163472634166,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| ||
|short_description=p1@TMEM119 | |short_description=p1@TMEM119 | ||
}} | }} |
Latest revision as of 05:07, 16 September 2015
Short description: | p1@TMEM119 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM119_5end |
Coexpression cluster: | C2182_Mesenchymal_Adipocyte_Hair_Preadipocyte_osteosarcoma_Saos2_normal |
Association with transcript: | 0bp_to_ENST00000433191_5end |
EntrezGene: | TMEM119 |
HGNC: | 27884 |
UniProt: | E9PFT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.45e-25 | 76 |
skin fibroblast | 4.60e-13 | 23 |
muscle precursor cell | 1.92e-09 | 58 |
myoblast | 1.92e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.92e-09 | 58 |
preadipocyte | 2.21e-09 | 12 |
muscle cell | 3.73e-09 | 55 |
fat cell | 2.32e-08 | 15 |
electrically responsive cell | 2.62e-07 | 61 |
electrically active cell | 2.62e-07 | 61 |
mesenchymal stem cell of adipose | 7.78e-07 | 8 |
multi fate stem cell | 7.93e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.48e-15 | 73 |
paraxial mesoderm | 6.08e-15 | 72 |
presumptive paraxial mesoderm | 6.08e-15 | 72 |
surface structure | 6.56e-15 | 99 |
somite | 8.40e-15 | 71 |
presomitic mesoderm | 8.40e-15 | 71 |
presumptive segmental plate | 8.40e-15 | 71 |
dermomyotome | 8.40e-15 | 71 |
trunk paraxial mesoderm | 8.40e-15 | 71 |
integument | 1.98e-13 | 46 |
integumental system | 1.98e-13 | 46 |
epithelial vesicle | 1.74e-12 | 78 |
tissue | 2.16e-11 | 773 |
multilaminar epithelium | 2.59e-11 | 83 |
adipose tissue | 1.02e-10 | 14 |
muscle tissue | 1.19e-10 | 64 |
musculature | 1.19e-10 | 64 |
musculature of body | 1.19e-10 | 64 |
skin of body | 1.50e-10 | 41 |
skeletal muscle tissue | 3.50e-10 | 62 |
striated muscle tissue | 3.50e-10 | 62 |
myotome | 3.50e-10 | 62 |
structure with developmental contribution from neural crest | 5.82e-10 | 132 |
adult organism | 2.41e-08 | 114 |
trunk mesenchyme | 1.34e-07 | 122 |
dermis | 1.80e-07 | 9 |
dermatome | 1.80e-07 | 9 |
future dermis | 1.80e-07 | 9 |
mesenchyme | 3.01e-07 | 160 |
entire embryonic mesenchyme | 3.01e-07 | 160 |
cavity lining | 6.85e-07 | 12 |
serous membrane | 6.85e-07 | 12 |