FFCP PHASE1:Hg19::chr10:10836803..10836831,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=207107 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=18383 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=45bp_to_ENST00000446372,NR_027082,uc001ikf.1_5end | |||
|cluster_id=chr10:10836803..10836831,- | |||
|coexpression_cluster_id=C1562 | |||
|description=CAGE_peak_3_at_SFTA1P_5end | |||
|id=chr10:10836803..10836831,- | |||
|ontology_enrichment_celltype=CL:0000066!4.32e-15!254;CL:0000076!2.33e-11!62;CL:0000077!3.80e-11!19;CL:0002076!4.11e-09!43;CL:0002368!1.21e-07!13;CL:0002321!2.10e-07!248;CL:0000220!3.34e-07!246;CL:0002159!4.30e-07!13;CL:0000223!9.86e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000077;8.85e-12;19!CL:0002262;5.83e-08;2!CL:1000398;5.83e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.04e-11,19;CL:0000066,1.85e-10,253;CL:0002262,5.24e-08,2;CL:1000398,5.24e-08,2;CL:0000213,9.17e-07,58;CL:0000215,9.17e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!2.50e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;5.83e-08;2!UBERON:0003497;5.83e-08;2!UBERON:0003909;5.83e-08;2!UBERON:0003835;5.83e-08;2!UBERON:0002048;1.04e-07;22!UBERON:0000117;1.04e-07;22!UBERON:0000171;1.04e-07;22!UBERON:0000170;1.04e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,4.19e-09,82;UBERON:0001281,5.24e-08,2;UBERON:0003497,5.24e-08,2;UBERON:0003909,5.24e-08,2;UBERON:0003835,5.24e-08,2;UBERON:0002048,1.12e-07,22;UBERON:0000117,1.12e-07,22;UBERON:0000171,1.12e-07,22;UBERON:0000170,1.12e-07,22;UBERON:0005597,1.12e-07,22;UBERON:0000118,1.12e-07,22;UBERON:0004119,2.16e-07,160;UBERON:0000925,2.16e-07,160;UBERON:0006595,2.16e-07,160;UBERON:0000065,2.36e-07,54;UBERON:0008814,4.84e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.79120467188971,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.738726348460727,0,0,0.85870796139317,0.273748850145768,1.63205431473244,0,0,0,0,0,0,0.919421224478927,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.72038491523742,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,0,0,0,0,0,0.74000264525148,0,0.404132016209064,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13432183160021,0.358779271377724,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,1.36373060295417,3.15485054927904,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,1.2347220339942,0,0,0,0,0,0.122988438543114,0,0.439001141634502,0,0.201057944823262,1.66659201285353,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,1.87467667973554,2.01578553838631,0.992425680696705,0.447792613514241,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.897048674762886,0.43596006883328,0.66004457238855,0,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0.710783897485092,0,0.602878754119172,0.871533458600294,0.499864955910285,0,0,0,5.99062138728957,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0.391602314925481,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0.647747748306418,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,1.31205858279882,0.976135183992909,1.854738209659,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0.356128142586949,1.65284915360978,0.768760269460425,1.02090169995667,0,0,0,0,0,0.532306030317022,0,0,0,0.744316738719335,2.84741482246853,3.43134349062885,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0,0,0,0.577332676353072,0.670302275535787,1.08890984861323,2.35359501941948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,13.471017914196,0,0,0.23874448473769,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,2.77495773870551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,7.07240832367007,0,0.0979923974143777,1.74118413160805,0,3.61170668190395,0,0,0,0,0,0.225980740780532,0,0.19871461170299,0,0,1.04206466326994,0,0.799238438328521,0,5.61229321212987,0,0.576219191952599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.02562557547489,0,3.64638874906946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.55294545352012,3.30129040709298,4.55662960881915,0,0,0,0.638341257770182,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0,0,3.80805212168795,0,0,0.966695013382396,0,0,1.20008329398946,0,0,0,0,8.14878047224718,21.1405376491821,0.680117776536817,0,4.89473409012935,0,1.23520578864389,2.19284049578707,0,21.6063722863425,1.18259708457151,0,12.090061960592,0.303859956177382,0,0,0,0,0.327609848846413,0,2.53574548030352,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0.550285795565037,7.39364263362165,2.66967466827017,0.690359926060101,0,0,0,0,0,35.7022780172011,0,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,10.6374456795571,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.4875085086472,0,0,0,0,0.535928260312357,0,0,0,0,0,0,8.85841714386846,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@SFTA1P | |||
}} |
Latest revision as of 06:25, 16 September 2015
Short description: | p3@SFTA1P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SFTA1P_5end |
Coexpression cluster: | C1562_papillary_mesothelioma_oral_mucinous_Multipotent_Smooth_endometrial |
Association with transcript: | 45bp_to_ENST00000446372, NR_027082, uc001ikf.1_5end |
EntrezGene: | SFTA1P |
HGNC: | 18383 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.04e-11 | 19 |
epithelial cell | 1.85e-10 | 253 |
endothelial cell of sinusoid | 5.24e-08 | 2 |
endothelial cell of hepatic sinusoid | 5.24e-08 | 2 |
lining cell | 9.17e-07 | 58 |
barrier cell | 9.17e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 4.19e-09 | 82 |
hepatic sinusoid | 5.24e-08 | 2 |
abdomen blood vessel | 5.24e-08 | 2 |
sinusoid | 5.24e-08 | 2 |
abdominal segment blood vessel | 5.24e-08 | 2 |
lung | 1.12e-07 | 22 |
respiratory tube | 1.12e-07 | 22 |
respiration organ | 1.12e-07 | 22 |
pair of lungs | 1.12e-07 | 22 |
lung primordium | 1.12e-07 | 22 |
lung bud | 1.12e-07 | 22 |
endoderm-derived structure | 2.16e-07 | 160 |
endoderm | 2.16e-07 | 160 |
presumptive endoderm | 2.16e-07 | 160 |
respiratory tract | 2.36e-07 | 54 |
pharyngeal arch system | 4.84e-07 | 18 |