FFCP PHASE1:Hg19::chr2:109237717..109237729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3987 | |EntrezGene=3987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6616 | |HGNC=6616 | ||
|TSSclassifier=strong | |||
|UniProt=P48059,F8WE10 | |UniProt=P48059,F8WE10 | ||
|association_with_transcript=0bp_to_ENST00000409441,ENST00000422797_5end | |association_with_transcript=0bp_to_ENST00000409441,ENST00000422797_5end | ||
|cluster_id=chr2:109237717..109237729,+ | |||
|coexpression_cluster_id=C854 | |coexpression_cluster_id=C854 | ||
|description=CAGE_peak_14_at_LIMS1_5end | |description=CAGE_peak_14_at_LIMS1_5end | ||
|id=chr2:109237717..109237729,+ | |id=chr2:109237717..109237729,+ | ||
|ontology_enrichment_celltype=CL:0000791;1.19e-21;18!CL:0000789;1.19e-21;18!CL:0002419;1.19e-21;18!CL:0000084;6.33e-17;25!CL:0000625;7.24e-11;11!CL:0000624;8.57e-11;6!CL:0002166;4.63e-08;3 | |ontology_enrichment_celltype=CL:0000791!2.08e-14!18;CL:0000789!2.08e-14!18;CL:0002420!2.08e-14!18;CL:0002419!2.08e-14!18;CL:0000790!2.08e-14!18;CL:0000542!2.18e-14!53;CL:0000051!2.18e-14!53;CL:0000838!8.48e-14!52;CL:0000084!2.45e-13!25;CL:0000827!2.45e-13!25;CL:0000738!7.23e-09!140;CL:0002076!7.75e-09!43;CL:0000625!1.56e-08!11;CL:0002087!6.35e-08!119 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;1.19e-21;18!CL:0000789;1.19e-21;18!CL:0002419;1.19e-21;18!CL:0000084;6.33e-17;25!CL:0000625;7.24e-11;11!CL:0000624;8.57e-11;6!CL:0002166;4.63e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000791,8.87e-22,18;CL:0000789,8.87e-22,18;CL:0002420,8.87e-22,18;CL:0002419,8.87e-22,18;CL:0000790,8.87e-22,18;CL:0000084,5.05e-17,25;CL:0000827,5.05e-17,25;CL:0000838,2.82e-12,52;CL:0000542,5.96e-12,53;CL:0000051,5.96e-12,53;CL:0000625,5.23e-11,11;CL:0000624,8.39e-11,6;CL:0002166,2.65e-08,3 | ||
|ontology_enrichment_uberon=UBERON:0000178;7.53e-07;15!UBERON:0000179;7.53e-07;15!UBERON:0000463;7.53e-07;15 | |ontology_enrichment_development_v019=CL:0000790;1.19e-21;18 | ||
|ontology_enrichment_disease=DOID:1749!1.18e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.53e-07;15!UBERON:0000179;7.53e-07;15!UBERON:0000463;7.53e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.78e-07,15;UBERON:0000179,6.78e-07,15;UBERON:0000463,6.78e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,0.821005894499457,1.57421562627358,0,0.767658796194425,0,0,0.30120591877825,0.739508020333575,0.154934401160603,0.142169232487422,0.293600439334847,0,0.200544447470142,0.217010870715852,0.447830948479849,0.647787332037959,0.515151135268373,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,1.32208974556972,1.90810750907073,0,0,0,0,1.12101712596307,0.263384084775077,1.37696839079683,2.35806457649499,4.93443597598822,3.17654341242288,0.32592226663359,0.473447805734733,0,7.13026924065111,5.59751224202191,5.75988125917415,7.04090045789041,7.94166182299186,5.46249259751489,1.64437904603676,1.65810010671509,2.02862160014537,1.18629250529648,1.87278579662799,2.09071047609954,8.27158201692233,4.59864592322305,5.84166657320471,9.1087089127021,4.45991580053735,0.651083453856419,4.75226022224187,1.95747654801105,3.19966527886046,6.24653632761729,4.97232229292435,2.46338399076314,0.604820229674197,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,3.87780264148325,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0.818238361772504,0.860413786167011,0,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,1.20725313949488,1.1240175325762,0.502644862058154,1.29623823221941,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,3.74935335947108,2.18376766658517,1.98485136139341,0.895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01753259188349,0.788123040807709,0.646882724578552,0.898401253958239,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.215714200818617,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.184161977871793,0,0,0,0,0.308061348417659,0,0,2.11103257785751,0,0,0.215915916102139,0,1.35473218771926,0,0.254876273045038,0,0.671624264166535,0,0,0,0,0,0.103041011647722,0,0,3.44559322797703,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0,2.97512847649761,0.960950336825531,1.27612712494584,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,1.34710957815717,0,0,0.376575203107117,0.86101074534246,0,0.443430153536676,2.52695740227655,1.52234282769651,0,2.27858874869665,2.1440859791201,1.23408681925858,1.94541993357815,3.24018862342869,0.79312517629427,0,0,0.245040215981032,0.929015875628594,0,0.213425530045242,1.4348364545594,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0.23874448473769,0,0.307160702099232,0,0,2.00355669041231,0,1.26675244876796,0,1.10513566212459,8.56571342704538,0,1.23084805461069,0,0.449341755736634,0,0,0.394573622547734,0,0,0,0,0,0,0,0,1.82069517256799,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0.189753732724185,0.158936578980379,3.58696709697646,3.26465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,3.15667522279512,0,0,0,0,0,0,0,0,0,1.42304773014896,0.693373365065693,0.347119476670262,0.489961987071888,1.21882889212564,0.873633341210151,0,0,0,0,0.484945082442097,0.176512253383001,0,0.411125773940253,0,0,0,0.160317640503067,0,0.39961921916426,0.288180834308212,1.83258553865465,0,0,0,2.59263438078475,0,0.523014231561666,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0.254019996197353,0,0,0,0.137539436597234,0,1.5748172408605,0.77380195455795,0.121499113316049,0,0.551639951094387,0.314727528809989,0.105600336519406,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.747511887973863,3.45849471219265,0,0.496166021811951,2.56895121467328,0.487170393523584,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813741466409323,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,1.94860308839388,1.59437808376036,0.654261577023377,0,0.245772908753719,0.422624246717254,0.19998739585493,0,0,0,0,0.419638523158333,0,0,0.539124056983409,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.825788063434183,1.46742878817343,0.231051332300676,0,0,0,0,0,0,0,0,0.295712172434091,0.135075169236789,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0.455324382702595,0,0,0,0,0.0657727735628491,0.472775363535873,0,0.156986185701028,0,0.560544326627578,0,0.431855182437243,0.9555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| ||
|short_description=p14@LIMS1 | |short_description=p14@LIMS1 | ||
}} | }} |
Latest revision as of 06:32, 16 September 2015
Short description: | p14@LIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_LIMS1_5end |
Coexpression cluster: | C854_argyrophil_CD4_anaplastic_smallcell_nonsmall_seminal_CD8 |
Association with transcript: | 0bp_to_ENST00000409441, ENST00000422797_5end |
EntrezGene: | LIMS1 |
HGNC: | 6616 |
UniProt: | P48059F8WE10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.87e-22 | 18 |
alpha-beta T cell | 8.87e-22 | 18 |
immature T cell | 8.87e-22 | 18 |
mature T cell | 8.87e-22 | 18 |
immature alpha-beta T cell | 8.87e-22 | 18 |
T cell | 5.05e-17 | 25 |
pro-T cell | 5.05e-17 | 25 |
lymphoid lineage restricted progenitor cell | 2.82e-12 | 52 |
lymphocyte | 5.96e-12 | 53 |
common lymphoid progenitor | 5.96e-12 | 53 |
CD8-positive, alpha-beta T cell | 5.23e-11 | 11 |
CD4-positive, alpha-beta T cell | 8.39e-11 | 6 |
epithelial cell of Malassez | 2.65e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 6.78e-07 | 15 |
haemolymphatic fluid | 6.78e-07 | 15 |
organism substance | 6.78e-07 | 15 |