FFCP PHASE1:Hg19::chr1:22986001..22986054,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=713 | |EntrezGene=713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1242 | |HGNC=1242 | ||
|TSSclassifier=strong | |||
|UniProt=P02746 | |UniProt=P02746 | ||
|association_with_transcript=0bp_to_X03084_5end | |association_with_transcript=0bp_to_X03084_5end | ||
|cluster_id=chr1:22986001..22986054,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_4_at_C1QB_5end | |description=CAGE_peak_4_at_C1QB_5end | ||
|id=chr1:22986001..22986054,+ | |id=chr1:22986001..22986054,+ | ||
|ontology_enrichment_celltype=CL:0002619!7.10e-07!3;CL:0002194!7.24e-07!63;CL:0000576!7.24e-07!63;CL:0000040!7.24e-07!63;CL:0000559!7.24e-07!63 | |ontology_enrichment_celltype=CL:0002619!7.10e-07!3;CL:0002194!7.24e-07!63;CL:0000576!7.24e-07!63;CL:0000040!7.24e-07!63;CL:0000559!7.24e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000235;9.70e-26;6!CL:0002619;5.97e-15;3!CL:0000840;3.01e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,6.33e-26,6;CL:0002619,5.99e-15,3;CL:0002194,1.00e-09,59;CL:0000576,1.00e-09,59;CL:0000040,1.00e-09,59;CL:0000559,1.00e-09,59;CL:0002009,2.53e-09,61;CL:0000839,2.01e-08,66;CL:0000557,2.93e-08,67;CL:0000766,1.65e-07,72;CL:0000840,2.54e-07,5;CL:0001029,2.54e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.35e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0009663;1.35e-09;7!UBERON:0001873;3.35e-09;2!UBERON:0002420;1.75e-07;9!UBERON:0000125;1.75e-07;9!UBERON:0007245;1.75e-07;9!UBERON:0002308;1.75e-07;9!UBERON:0010009;1.75e-07;9!UBERON:0010011;1.75e-07;9!UBERON:0000454;1.75e-07;9!UBERON:0002106;5.10e-07;3!UBERON:0004151;8.26e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.92e-14,114;UBERON:0009663,1.35e-09,7;UBERON:0001873,3.81e-09,2;UBERON:0010122,3.81e-09,2;UBERON:0002405,1.63e-08,93;UBERON:0002420,1.75e-07,9;UBERON:0000125,1.75e-07,9;UBERON:0007245,1.75e-07,9;UBERON:0002308,1.75e-07,9;UBERON:0010009,1.75e-07,9;UBERON:0010011,1.75e-07,9;UBERON:0000454,1.75e-07,9;UBERON:0005409,3.25e-07,25;UBERON:0002106,4.88e-07,3;UBERON:0004854,4.88e-07,3;UBERON:0009034,4.88e-07,3;UBERON:0002095,4.88e-07,3;UBERON:0004782,4.88e-07,3;UBERON:0003281,4.88e-07,3;UBERON:0009664,4.88e-07,3;UBERON:0002296,4.88e-07,3;UBERON:0005602,4.88e-07,3;UBERON:0001179,4.88e-07,3;UBERON:0006293,4.88e-07,3;UBERON:0002371,5.55e-07,76;UBERON:0002193,7.19e-07,108;UBERON:0004151,8.51e-07,3;UBERON:0002390,8.75e-07,98;UBERON:0003061,8.75e-07,98 | |||
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| ||
|short_description=p4@C1QB | |short_description=p4@C1QB | ||
}} | }} |
Latest revision as of 06:34, 16 September 2015
Short description: | p4@C1QB |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C1QB_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_X03084_5end |
EntrezGene: | C1QB |
HGNC: | 1242 |
UniProt: | P02746 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 6.33e-26 | 6 |
adult endothelial progenitor cell | 5.99e-15 | 3 |
monopoietic cell | 1.00e-09 | 59 |
monocyte | 1.00e-09 | 59 |
monoblast | 1.00e-09 | 59 |
promonocyte | 1.00e-09 | 59 |
macrophage dendritic cell progenitor | 2.53e-09 | 61 |
myeloid lineage restricted progenitor cell | 2.01e-08 | 66 |
granulocyte monocyte progenitor cell | 2.93e-08 | 67 |
myeloid leukocyte | 1.65e-07 | 72 |
immature conventional dendritic cell | 2.54e-07 | 5 |
common dendritic progenitor | 2.54e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.92e-14 | 114 |
telencephalic nucleus | 1.35e-09 | 7 |
caudate nucleus | 3.81e-09 | 2 |
future caudate nucleus | 3.81e-09 | 2 |
immune system | 1.63e-08 | 93 |
basal ganglion | 1.75e-07 | 9 |
neural nucleus | 1.75e-07 | 9 |
nuclear complex of neuraxis | 1.75e-07 | 9 |
nucleus of brain | 1.75e-07 | 9 |
aggregate regional part of brain | 1.75e-07 | 9 |
collection of basal ganglia | 1.75e-07 | 9 |
cerebral subcortex | 1.75e-07 | 9 |
gastrointestinal system | 3.25e-07 | 25 |
spleen | 4.88e-07 | 3 |
gastrointestinal system mesentery | 4.88e-07 | 3 |
stomach region | 4.88e-07 | 3 |
mesentery | 4.88e-07 | 3 |
gastrointestinal system serosa | 4.88e-07 | 3 |
mesentery of stomach | 4.88e-07 | 3 |
gut mesentery | 4.88e-07 | 3 |
dorsal mesentery | 4.88e-07 | 3 |
dorsal mesogastrium | 4.88e-07 | 3 |
peritoneal cavity | 4.88e-07 | 3 |
spleen primordium | 4.88e-07 | 3 |
bone marrow | 5.55e-07 | 76 |
hemolymphoid system | 7.19e-07 | 108 |
cardiac chamber | 8.51e-07 | 3 |
hematopoietic system | 8.75e-07 | 98 |
blood island | 8.75e-07 | 98 |