FFCP PHASE1:Hg19::chr1:230846397..230846417,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:230846397..230846417,-
|short_description=p2@AGT
|description=CAGE_peak_2_at_AGT_5end
|association_with_transcript=178bp_to_AB529142,BT006851,DQ891016,DQ89...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=183 | |EntrezGene=183 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=333 | |HGNC=333 | ||
|TSSclassifier=strong | |||
|UniProt=Q86U78 | |UniProt=Q86U78 | ||
|association_with_transcript=178bp_to_AB529142,BT006851,DQ891016,DQ894196_5end | |||
|cluster_id=chr1:230846397..230846417,- | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_2_at_AGT_5end | |||
|id=chr1:230846397..230846417,- | |||
|ontology_enrichment_celltype=CL:0000181!1.87e-12!12;CL:0000417!1.87e-12!12;CL:0000668!1.87e-12!12;CL:0000414!1.87e-12!12;CL:0000412!1.87e-12!12;CL:0000182!1.87e-12!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.29e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.30e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.94e-18;3!UBERON:0006222;1.84e-14;1!UBERON:0010227;1.84e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p2@AGT | |||
}} | }} |
Latest revision as of 07:24, 16 September 2015
Short description: | p2@AGT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AGT_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 178bp_to_AB529142, BT006851, DQ891016, DQ894196_5end |
EntrezGene: | AGT |
HGNC: | 333 |
UniProt: | Q86U78 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.30e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 8.00e-18 | 19 |
digestive gland | 8.00e-18 | 19 |
liver bud | 8.00e-18 | 19 |
hepatic diverticulum | 2.14e-15 | 22 |
liver primordium | 2.14e-15 | 22 |
digestive tract diverticulum | 9.99e-15 | 23 |
left cardiac atrium | 2.41e-14 | 1 |
epithelial sac | 1.51e-13 | 25 |
epithelium of foregut-midgut junction | 1.51e-13 | 25 |
anatomical boundary | 1.51e-13 | 25 |
hepatobiliary system | 1.51e-13 | 25 |
foregut-midgut junction | 1.51e-13 | 25 |
septum transversum | 1.51e-13 | 25 |
sac | 5.01e-13 | 26 |
exocrine gland | 6.41e-11 | 31 |
exocrine system | 6.41e-11 | 31 |
cerebellum | 9.26e-10 | 6 |
rhombic lip | 9.26e-10 | 6 |
endocrine gland | 1.15e-09 | 35 |
cardiac atrium | 8.04e-08 | 2 |
future cardiac atrium | 8.04e-08 | 2 |
endocrine system | 1.70e-07 | 45 |
tube | 4.89e-07 | 192 |
regional part of metencephalon | 8.59e-07 | 9 |
metencephalon | 8.59e-07 | 9 |
future metencephalon | 8.59e-07 | 9 |