FFCP PHASE2:Hg19::chr10:111765684..111765732,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:120 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:245 |TSSclassif...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=245 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9UEY8 | ||
|association_with_transcript=0bp_to_NM_019903,uc001kys.3_5end | |association_with_transcript=0bp_to_NM_019903,uc001kys.3_5end | ||
|cluster_id=chr10:111765684..111765732,+ | |cluster_id=chr10:111765684..111765732,+ | ||
Latest revision as of 07:44, 16 September 2015
| Short description: | p3@ADD3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_ADD3_5end |
| Coexpression cluster: | C2034_mesenchymal_Synoviocyte_Fibroblast_Preadipocyte_Nucleus_Cardiac_Smooth |
| Association with transcript: | 0bp_to_NM_019903, uc001kys.3_5end |
| EntrezGene: | ADD3 |
| HGNC: | 245 |
| UniProt: | Q9UEY8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@ADD3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 2.80e-20 | 76 |
| muscle precursor cell | 4.13e-16 | 58 |
| myoblast | 4.13e-16 | 58 |
| multi-potent skeletal muscle stem cell | 4.13e-16 | 58 |
| muscle cell | 1.05e-14 | 55 |
| electrically responsive cell | 4.20e-12 | 61 |
| electrically active cell | 4.20e-12 | 61 |
| smooth muscle cell | 1.84e-11 | 43 |
| smooth muscle myoblast | 1.84e-11 | 43 |
| vascular associated smooth muscle cell | 1.03e-09 | 32 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| paraxial mesoderm | 4.72e-18 | 72 |
| presumptive paraxial mesoderm | 4.72e-18 | 72 |
| dense mesenchyme tissue | 7.29e-18 | 73 |
| somite | 1.40e-17 | 71 |
| presomitic mesoderm | 1.40e-17 | 71 |
| presumptive segmental plate | 1.40e-17 | 71 |
| dermomyotome | 1.40e-17 | 71 |
| trunk paraxial mesoderm | 1.40e-17 | 71 |
| muscle tissue | 1.99e-17 | 64 |
| musculature | 1.99e-17 | 64 |
Showing 1 to 10 of 72 entries
