FFCP PHASE1:Hg19::chr16:30662050..30662078,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:30662050..30662078,+
|short_description=p5@PRR14
|description=CAGE_peak_5_at_PRR14_5end
|association_with_transcript=-144bp_to_ENST00000287463_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=78994 | |EntrezGene=78994 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28458 | |HGNC=28458 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-144bp_to_ENST00000287463_5end | |||
|cluster_id=chr16:30662050..30662078,+ | |||
|coexpression_cluster_id=C615 | |||
|description=CAGE_peak_5_at_PRR14_5end | |||
|id=chr16:30662050..30662078,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.33e-23!140;CL:0000037!4.67e-20!172;CL:0000566!4.67e-20!172;CL:0002032!6.39e-18!165;CL:0000837!6.39e-18!165;CL:0000988!2.47e-17!182;CL:0002031!4.14e-17!124;CL:0002087!4.28e-16!119;CL:0000542!1.96e-14!53;CL:0000051!1.96e-14!53;CL:0000838!3.25e-14!52;CL:0000791!9.57e-12!18;CL:0000789!9.57e-12!18;CL:0002420!9.57e-12!18;CL:0002419!9.57e-12!18;CL:0000790!9.57e-12!18;CL:0000084!1.12e-09!25;CL:0000827!1.12e-09!25;CL:0000625!2.17e-08!11;CL:0000766!1.59e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.58e-17;18!CL:0000789;9.58e-17;18!CL:0002419;9.58e-17;18!CL:0000084;2.91e-15;25!CL:0000625;1.77e-11;11!CL:0000542;5.41e-11;53!CL:0000094;5.59e-09;8!CL:0002087;4.97e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.89e-27,136;CL:0000037,4.25e-22,168;CL:0002031,5.13e-20,120;CL:0002032,2.37e-19,161;CL:0000837,2.37e-19,161;CL:0000988,2.64e-19,177;CL:0002087,3.82e-19,115;CL:0000542,5.32e-18,53;CL:0000051,5.32e-18,53;CL:0000838,1.11e-17,52;CL:0000791,2.34e-16,18;CL:0000789,2.34e-16,18;CL:0002420,2.34e-16,18;CL:0002419,2.34e-16,18;CL:0000790,2.34e-16,18;CL:0000084,6.82e-15,25;CL:0000827,6.82e-15,25;CL:0000625,1.75e-11,11;CL:0000094,7.09e-09,8;CL:0000766,1.36e-08,72;CL:0002393,3.26e-07,9;CL:0002397,3.26e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;9.58e-17;18!CL:0000051;5.41e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.13e-11!102;UBERON:0003061!9.13e-11!102;UBERON:0007023!1.53e-10!115;UBERON:0002193!2.67e-10!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.69e-08;15!UBERON:0000179;4.69e-08;15!UBERON:0000463;4.69e-08;15!UBERON:0002390;5.49e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.21e-11,98;UBERON:0003061,1.21e-11,98;UBERON:0002193,2.78e-10,108;UBERON:0007023,8.20e-10,114;UBERON:0000178,4.92e-08,15;UBERON:0000179,4.92e-08,15;UBERON:0000463,4.92e-08,15 | |||
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| ||
|short_description=p5@PRR14 | |||
}} | }} |
Latest revision as of 08:25, 16 September 2015
Short description: | p5@PRR14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRR14_5end |
Coexpression cluster: | C615_CD19_Neutrophils_Eosinophils_CD4_CD8_Natural_blood |
Association with transcript: | -144bp_to_ENST00000287463_5end |
EntrezGene: | PRR14 |
HGNC: | 28458 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.89e-27 | 136 |
hematopoietic stem cell | 4.25e-22 | 168 |
hematopoietic lineage restricted progenitor cell | 5.13e-20 | 120 |
hematopoietic oligopotent progenitor cell | 2.37e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.37e-19 | 161 |
hematopoietic cell | 2.64e-19 | 177 |
nongranular leukocyte | 3.82e-19 | 115 |
lymphocyte | 5.32e-18 | 53 |
common lymphoid progenitor | 5.32e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.11e-17 | 52 |
mature alpha-beta T cell | 2.34e-16 | 18 |
alpha-beta T cell | 2.34e-16 | 18 |
immature T cell | 2.34e-16 | 18 |
mature T cell | 2.34e-16 | 18 |
immature alpha-beta T cell | 2.34e-16 | 18 |
T cell | 6.82e-15 | 25 |
pro-T cell | 6.82e-15 | 25 |
CD8-positive, alpha-beta T cell | 1.75e-11 | 11 |
granulocyte | 7.09e-09 | 8 |
myeloid leukocyte | 1.36e-08 | 72 |
intermediate monocyte | 3.26e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.26e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.21e-11 | 98 |
blood island | 1.21e-11 | 98 |
hemolymphoid system | 2.78e-10 | 108 |
adult organism | 8.20e-10 | 114 |
blood | 4.92e-08 | 15 |
haemolymphatic fluid | 4.92e-08 | 15 |
organism substance | 4.92e-08 | 15 |