FFCP PHASE1:Hg19::chr20:43280974..43281004,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100 | |EntrezGene=100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=186 | |HGNC=186 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_ENST00000535573_5end | |association_with_transcript=-100bp_to_ENST00000535573_5end | ||
|cluster_id=chr20:43280974..43281004,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_6_at_ADA_5end | |description=CAGE_peak_6_at_ADA_5end | ||
|id=chr20:43280974..43281004,- | |id=chr20:43280974..43281004,- | ||
|ontology_enrichment_celltype=CL:0002087!6.45e-43!119;CL:0000738!1.20e-39!140;CL:0002031!1.88e-38!124;CL:0002057!1.11e-34!42;CL:0000037!2.07e-32!172;CL:0000566!2.07e-32!172;CL:0000860!4.98e-32!45;CL:0002032!2.70e-30!165;CL:0000837!2.70e-30!165;CL:0000988!3.93e-30!182;CL:0002194!5.13e-21!63;CL:0000576!5.13e-21!63;CL:0000040!5.13e-21!63;CL:0000559!5.13e-21!63;CL:0000838!2.47e-20!52;CL:0002009!3.15e-20!65;CL:0000542!7.21e-20!53;CL:0000051!7.21e-20!53;CL:0000766!1.57e-18!76;CL:0000839!1.88e-18!70;CL:0000557!3.98e-18!71;CL:0000945!3.45e-14!24;CL:0000826!3.45e-14!24;CL:0000623!2.15e-13!3;CL:0000825!2.15e-13!3;CL:0000763!3.03e-12!112;CL:0000049!3.03e-12!112;CL:0000134!1.34e-11!358;CL:0002393!1.85e-11!9;CL:0002397!1.85e-11!9;CL:0002320!3.39e-11!365;CL:0000219!8.87e-10!390;CL:0000048!9.31e-09!430;CL:0000723!1.66e-08!436;CL:0000034!3.52e-08!444 | |ontology_enrichment_celltype=CL:0002087!6.45e-43!119;CL:0000738!1.20e-39!140;CL:0002031!1.88e-38!124;CL:0002057!1.11e-34!42;CL:0000037!2.07e-32!172;CL:0000566!2.07e-32!172;CL:0000860!4.98e-32!45;CL:0002032!2.70e-30!165;CL:0000837!2.70e-30!165;CL:0000988!3.93e-30!182;CL:0002194!5.13e-21!63;CL:0000576!5.13e-21!63;CL:0000040!5.13e-21!63;CL:0000559!5.13e-21!63;CL:0000838!2.47e-20!52;CL:0002009!3.15e-20!65;CL:0000542!7.21e-20!53;CL:0000051!7.21e-20!53;CL:0000766!1.57e-18!76;CL:0000839!1.88e-18!70;CL:0000557!3.98e-18!71;CL:0000945!3.45e-14!24;CL:0000826!3.45e-14!24;CL:0000623!2.15e-13!3;CL:0000825!2.15e-13!3;CL:0000763!3.03e-12!112;CL:0000049!3.03e-12!112;CL:0000134!1.34e-11!358;CL:0002393!1.85e-11!9;CL:0002397!1.85e-11!9;CL:0002320!3.39e-11!365;CL:0000219!8.87e-10!390;CL:0000048!9.31e-09!430;CL:0000723!1.66e-08!436;CL:0000034!3.52e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.02e-30;6!CL:0002397;1.02e-30;6!CL:0000576;9.36e-20;48!CL:0000860;1.63e-19;33!CL:0002057;1.63e-19;33!CL:0000473;6.90e-14;39!CL:0000234;6.90e-14;39!CL:0000766;1.42e-13;69!CL:0002087;1.07e-11;104!CL:0000623;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.50e-38,42;CL:0002057,9.50e-38,42;CL:0000473,5.23e-33,48;CL:0000234,5.23e-33,48;CL:0002194,2.32e-26,59;CL:0000576,2.32e-26,59;CL:0000040,2.32e-26,59;CL:0000559,2.32e-26,59;CL:0002009,1.67e-25,61;CL:0000839,1.40e-23,66;CL:0000557,3.14e-23,67;CL:0000766,1.28e-21,72;CL:0002393,8.88e-21,9;CL:0002397,8.88e-21,9;CL:0002087,1.17e-16,115;CL:0002031,5.91e-16,120;CL:0000763,2.31e-14,108;CL:0000049,2.31e-14,108;CL:0000738,4.83e-14,136;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177;CL:0000623,8.29e-08,3;CL:0000825,8.29e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.23e-25;42 | |||
|ontology_enrichment_disease=DOID:0060058!9.57e-10!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.99e-17!102;UBERON:0003061!5.99e-17!102;UBERON:0002371!1.45e-15!80;UBERON:0002193!6.25e-15!112;UBERON:0001474!3.73e-14!86;UBERON:0002405!5.35e-13!115;UBERON:0004765!2.29e-11!101;UBERON:0001434!2.29e-11!101;UBERON:0002384!1.20e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.77e-20,76;UBERON:0001474,5.63e-19,82;UBERON:0004765,2.81e-17,90;UBERON:0002405,1.03e-16,93;UBERON:0002390,7.49e-16,98;UBERON:0003061,7.49e-16,98;UBERON:0001434,1.57e-15,100;UBERON:0002193,2.31e-14,108;UBERON:0002204,3.74e-09,167;UBERON:0003081,1.94e-07,203 | |||
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| ||
|short_description=p6@ADA | |short_description=p6@ADA | ||
}} | }} |
Latest revision as of 08:30, 16 September 2015
Short description: | p6@ADA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ADA_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -100bp_to_ENST00000535573_5end |
EntrezGene: | ADA |
HGNC: | 186 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.50e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.50e-38 | 42 |
defensive cell | 5.23e-33 | 48 |
phagocyte | 5.23e-33 | 48 |
monopoietic cell | 2.32e-26 | 59 |
monocyte | 2.32e-26 | 59 |
monoblast | 2.32e-26 | 59 |
promonocyte | 2.32e-26 | 59 |
macrophage dendritic cell progenitor | 1.67e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.40e-23 | 66 |
granulocyte monocyte progenitor cell | 3.14e-23 | 67 |
myeloid leukocyte | 1.28e-21 | 72 |
intermediate monocyte | 8.88e-21 | 9 |
CD14-positive, CD16-positive monocyte | 8.88e-21 | 9 |
nongranular leukocyte | 1.17e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 5.91e-16 | 120 |
myeloid cell | 2.31e-14 | 108 |
common myeloid progenitor | 2.31e-14 | 108 |
leukocyte | 4.83e-14 | 136 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
natural killer cell | 8.29e-08 | 3 |
pro-NK cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.77e-20 | 76 |
bone element | 5.63e-19 | 82 |
skeletal element | 2.81e-17 | 90 |
immune system | 1.03e-16 | 93 |
hematopoietic system | 7.49e-16 | 98 |
blood island | 7.49e-16 | 98 |
skeletal system | 1.57e-15 | 100 |
hemolymphoid system | 2.31e-14 | 108 |
musculoskeletal system | 3.74e-09 | 167 |
lateral plate mesoderm | 1.94e-07 | 203 |