FFCP PHASE1:Hg19::chr4:15683345..15683352,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285550 | |EntrezGene=285550 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27740 | |HGNC=27740 | ||
|TSSclassifier=strong | |||
|UniProt=P0CF97 | |UniProt=P0CF97 | ||
|association_with_transcript=0bp_to_NM_001145191,uc003gof.3_5end | |association_with_transcript=0bp_to_NM_001145191,uc003gof.3_5end | ||
|cluster_id=chr4:15683345..15683352,+ | |||
|description=CAGE_peak_6_at_FAM200B_5end | |description=CAGE_peak_6_at_FAM200B_5end | ||
|id=chr4:15683345..15683352,+ | |id=chr4:15683345..15683352,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.56e-22!140;CL:0000037!3.35e-22!172;CL:0000566!3.35e-22!172;CL:0000988!6.29e-22!182;CL:0002031!7.19e-21!124;CL:0002032!2.50e-20!165;CL:0000837!2.50e-20!165;CL:0002057!2.93e-20!42;CL:0002087!1.55e-19!119;CL:0000860!2.88e-18!45;CL:0000766!1.41e-12!76;CL:0000839!1.68e-12!70;CL:0000763!5.55e-11!112;CL:0000049!5.55e-11!112;CL:0000557!3.22e-10!71;CL:0000542!9.48e-10!53;CL:0000051!9.48e-10!53;CL:0000838!1.17e-09!52;CL:0002194!2.09e-09!63;CL:0000576!2.09e-09!63;CL:0000040!2.09e-09!63;CL:0000559!2.09e-09!63;CL:0002009!1.22e-08!65;CL:0000084!1.46e-07!25;CL:0000827!1.46e-07!25 | |ontology_enrichment_celltype=CL:0000738!2.56e-22!140;CL:0000037!3.35e-22!172;CL:0000566!3.35e-22!172;CL:0000988!6.29e-22!182;CL:0002031!7.19e-21!124;CL:0002032!2.50e-20!165;CL:0000837!2.50e-20!165;CL:0002057!2.93e-20!42;CL:0002087!1.55e-19!119;CL:0000860!2.88e-18!45;CL:0000766!1.41e-12!76;CL:0000839!1.68e-12!70;CL:0000763!5.55e-11!112;CL:0000049!5.55e-11!112;CL:0000557!3.22e-10!71;CL:0000542!9.48e-10!53;CL:0000051!9.48e-10!53;CL:0000838!1.17e-09!52;CL:0002194!2.09e-09!63;CL:0000576!2.09e-09!63;CL:0000040!2.09e-09!63;CL:0000559!2.09e-09!63;CL:0002009!1.22e-08!65;CL:0000084!1.46e-07!25;CL:0000827!1.46e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.55e-14;33!CL:0002057;8.55e-14;33!CL:0000576;9.39e-11;48!CL:0000473;5.48e-10;39!CL:0000234;5.48e-10;39!CL:0000766;3.03e-08;69!CL:0002393;4.22e-08;6!CL:0002397;4.22e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.63e-18,42;CL:0002057,1.63e-18,42;CL:0002031,1.15e-17,120;CL:0002032,1.87e-17,161;CL:0000837,1.87e-17,161;CL:0000037,2.04e-17,168;CL:0000738,4.62e-17,136;CL:0000988,4.75e-17,177;CL:0000839,7.15e-16,66;CL:0000766,9.44e-16,72;CL:0000473,1.32e-15,48;CL:0000234,1.32e-15,48;CL:0000763,4.95e-14,108;CL:0000049,4.95e-14,108;CL:0002087,1.80e-13,115;CL:0000557,1.58e-12,67;CL:0002194,1.45e-11,59;CL:0000576,1.45e-11,59;CL:0000040,1.45e-11,59;CL:0000559,1.45e-11,59;CL:0002009,4.78e-11,61 | |||
|ontology_enrichment_development_v019=CL:0002057;3.78e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.59e-13!102;UBERON:0003061!1.59e-13!102;UBERON:0002193!8.37e-12!112;UBERON:0001049!8.99e-10!57;UBERON:0005068!8.99e-10!57;UBERON:0006241!8.99e-10!57;UBERON:0007135!8.99e-10!57;UBERON:0007023!1.94e-08!115;UBERON:0002371!1.96e-08!80;UBERON:0002780!3.79e-08!41;UBERON:0001890!3.79e-08!41;UBERON:0006240!3.79e-08!41;UBERON:0002616!5.71e-08!59;UBERON:0003080!1.08e-07!42;UBERON:0004765!2.38e-07!101;UBERON:0001434!2.38e-07!101;UBERON:0000955!3.15e-07!69;UBERON:0006238!3.15e-07!69;UBERON:0001017!5.11e-07!82;UBERON:0001474!5.46e-07!86;UBERON:0002020!6.39e-07!34;UBERON:0003528!6.39e-07!34;UBERON:0005743!8.56e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.46e-13,98;UBERON:0003061,1.46e-13,98;UBERON:0002193,7.24e-13,108;UBERON:0002405,8.32e-11,93;UBERON:0002371,1.79e-10,76;UBERON:0001474,2.33e-09,82;UBERON:0004765,4.08e-08,90;UBERON:0001434,7.46e-07,100 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0.492484232307152,0,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0.916960868975415,0.738905305049512,1.18066171970519,0.786728553697808,0.767658796194425,1.54816123316076,0,0,0,1.16200800870452,1.70603078984906,0.880801318004542,0.553995408531877,1.80490002723128,0.651032612147555,0,0,0,1.30858414901608,0.755751887377619,1.21292030593908,0.464858073811369,0.822335776043652,1.54853185447552,0.863077176966451,0.512321413058201,0.47296445977717,1.37898272294647,0.645484683583826,2.70852973188684,0.752969358170419,1.36453075028923,0.898893937780338,1.53041946185451,0.320929027076094,1.27867425159808,0,0.598390972864896,1.70489900213078,0.290209238628584,0.56738522469114,1.24564449799115,2.00998932205395,0.521482918420201,2.17188844705117,0.605399502633369,0,0,1.05627643155971,1.06302149982522,2.72556239160889,1.79725809834392,0.901061357049038,1.76798145366788,0.570025487482497,0.79566670879636,0.91332076882317,0,0.546138611262131,0,0,0,0,0,0,1.70763890732835,0,0.382273228125229,1.32171328579026,2.24203425192614,1.05353633910031,1.180258620683,0.786021525498329,0.205601498999509,1.17030546773475,0.32592226663359,0.473447805734733,0,1.44833593950726,0.589211814949674,1.10766947291811,3.24964636518019,0.768547918354051,1.56071217071854,0.328875809207352,2.76350017785848,1.15921234294021,0.593146252648242,1.07016331235885,0,1.13309342697566,0,0.34362744548263,1.01207876807801,1.27426165729639,0,0,0.451725357233318,1.02389288923535,0,0.710331756132051,1.64225599384209,1.20964045934839,1.06976078313403,0.579297615531196,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.189069634328136,0,0.175669571386252,0.261958150995425,0,0,0,0,0,0,1.14398982156026,0.371457501329565,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0,0.277064115484183,0,0.919463387397059,0.150238058906597,0.226864366320042,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0.93733833986777,0,0.141775097242386,0,0,0,2.95597942737566,1.84901711427775,0.621984346622316,0.576479813667846,0.37872730027914,0.063497894292169,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0.845302752556,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.784596007954691,0.591092280605782,0.862510299438069,0.256686072559497,0.254094624222463,0,0.773288812777695,0.167516265334349,0,1.49801404789436,0,1.65766205374414,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.347534457872331,0.391602314925481,0,0.413536052245775,0.647142602455851,0.426910231213777,0,0,0,0.248107807818777,0,0,0.256278298511402,0.511707249066704,0.482561763430822,0,0,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0.0920809889358963,0.114814448164607,0,0.524497659837696,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,1.00337954770971,0,0,0,1.31555925987561,1.3071772551245,0,0,0.325378394664303,0,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0.356128142586949,0.330569830721956,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,1.52927441428475,0,0.952927101831156,2.05681136543097,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0.185803175125719,0.865615277858669,0.497992903438899,0.637705090915289,0.199579371432817,0.957526850661834,0,0.324621940274555,0,1.14117339516596,0,0,0.169291777801603,0.321176150207399,0.403599414382095,0,0,0,0,0.166849141711909,1.56310476321632,0.556812347790485,0,0.270455678475983,0,1.4098700508785,0,0,0.485442086998054,0.334330152832435,0,0,0.296964680832639,0,2.98244294329889,0.140669416410513,0.111308705022906,0.329607748453519,0,0,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0.0986434056369336,2.3948309234694,0,0.969332746095218,0.371072392647405,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.658156191461918,0.10893846351899,0,0.153900517007594,0.113942055847001,0,0,0.108647371922008,0,0,0,1.02193298195737,0.4709407691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| ||
|short_description=p6@FAM200B | |short_description=p6@FAM200B | ||
}} | }} |
Latest revision as of 08:39, 16 September 2015
Short description: | p6@FAM200B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FAM200B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001145191, uc003gof.3_5end |
EntrezGene: | FAM200B |
HGNC: | 27740 |
UniProt: | P0CF97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.63e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.63e-18 | 42 |
hematopoietic lineage restricted progenitor cell | 1.15e-17 | 120 |
hematopoietic oligopotent progenitor cell | 1.87e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-17 | 161 |
hematopoietic stem cell | 2.04e-17 | 168 |
leukocyte | 4.62e-17 | 136 |
hematopoietic cell | 4.75e-17 | 177 |
myeloid lineage restricted progenitor cell | 7.15e-16 | 66 |
myeloid leukocyte | 9.44e-16 | 72 |
defensive cell | 1.32e-15 | 48 |
phagocyte | 1.32e-15 | 48 |
myeloid cell | 4.95e-14 | 108 |
common myeloid progenitor | 4.95e-14 | 108 |
nongranular leukocyte | 1.80e-13 | 115 |
granulocyte monocyte progenitor cell | 1.58e-12 | 67 |
monopoietic cell | 1.45e-11 | 59 |
monocyte | 1.45e-11 | 59 |
monoblast | 1.45e-11 | 59 |
promonocyte | 1.45e-11 | 59 |
macrophage dendritic cell progenitor | 4.78e-11 | 61 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.46e-13 | 98 |
blood island | 1.46e-13 | 98 |
hemolymphoid system | 7.24e-13 | 108 |
immune system | 8.32e-11 | 93 |
bone marrow | 1.79e-10 | 76 |
bone element | 2.33e-09 | 82 |
skeletal element | 4.08e-08 | 90 |
skeletal system | 7.46e-07 | 100 |