FFCP PHASE1:Hg19::chr9:137533862..137533873,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1289 | |EntrezGene=1289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2209 | |HGNC=2209 | ||
|TSSclassifier=strong | |||
|UniProt=P20908,Q59EE7 | |UniProt=P20908,Q59EE7 | ||
|association_with_transcript=210bp_to_NM_000093,uc004cfe.2_5end | |association_with_transcript=210bp_to_NM_000093,uc004cfe.2_5end | ||
|cluster_id=chr9:137533862..137533873,+ | |||
|coexpression_cluster_id=C4809 | |coexpression_cluster_id=C4809 | ||
|description=CAGE_peak_9_at_COL5A1_5end | |description=CAGE_peak_9_at_COL5A1_5end | ||
|id=chr9:137533862..137533873,+ | |id=chr9:137533862..137533873,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.94e-22!180;CL:0000057!6.17e-17!75;CL:0000144!2.68e-09!625;CL:0002334!1.41e-08!12;CL:0000048!1.75e-08!430;CL:0002371!2.24e-08!591;CL:0000723!8.06e-08!436;CL:0000499!1.87e-07!27;CL:0000548!1.94e-07!679;CL:0000004!1.94e-07!679;CL:0000255!1.94e-07!679;CL:0000034!3.34e-07!444;CL:0000327!3.38e-07!14;CL:0000012!3.95e-07!682;CL:0000183!8.94e-07!59 | |ontology_enrichment_celltype=CL:0000055!6.94e-22!180;CL:0000057!6.17e-17!75;CL:0000144!2.68e-09!625;CL:0002334!1.41e-08!12;CL:0000048!1.75e-08!430;CL:0002371!2.24e-08!591;CL:0000723!8.06e-08!436;CL:0000499!1.87e-07!27;CL:0000548!1.94e-07!679;CL:0000004!1.94e-07!679;CL:0000255!1.94e-07!679;CL:0000034!3.34e-07!444;CL:0000327!3.38e-07!14;CL:0000012!3.95e-07!682;CL:0000183!8.94e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002334;4.64e-13;12!CL:0000349;3.06e-10;19!CL:0000134;5.84e-09;55!CL:0002580;2.05e-07;3!CL:0000048;2.41e-07;58!CL:0000723;2.79e-07;61!CL:0002320;2.96e-07;188!CL:0002579;3.55e-07;3!CL:0000708;6.03e-07;3!CL:0000346;7.23e-07;3!CL:1000428;7.23e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.15e-15,76;CL:0002334,5.78e-13,12;CL:0000349,7.51e-10,19;CL:0002320,1.22e-09,361;CL:0000048,3.80e-09,427;CL:0000134,6.36e-09,354;CL:0000723,9.17e-09,433;CL:0000219,1.24e-08,386;CL:0000034,2.84e-08,441;CL:0002580,2.23e-07,3;CL:0002579,3.05e-07,3;CL:0000708,3.98e-07,3;CL:0000346,7.61e-07,3;CL:1000428,7.61e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.47e-07!14 | |ontology_enrichment_disease=DOID:2394!7.47e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000478!6.26e-07!24;UBERON:0005631!6.73e-07!14;UBERON:0000158!6.73e-07!14;UBERON:0002199!7.65e-07!45;UBERON:0002416!7.65e-07!45 | |ontology_enrichment_uberon=UBERON:0000478!6.26e-07!24;UBERON:0005631!6.73e-07!14;UBERON:0000158!6.73e-07!14;UBERON:0002199!7.65e-07!45;UBERON:0002416!7.65e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.35e-08;6!UBERON:0002358;1.35e-08;6!UBERON:0003684;1.35e-08;6!UBERON:0001178;1.35e-08;6!UBERON:0000478;1.36e-07;24!UBERON:0003104;2.78e-07;7!UBERON:0009142;2.78e-07;7!UBERON:0003210;6.03e-07;3!UBERON:0005284;6.04e-07;5!UBERON:0000412;7.23e-07;3!UBERON:0001992;7.23e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.82e-10,371;UBERON:0003688,7.86e-09,6;UBERON:0002358,7.86e-09,6;UBERON:0003684,7.86e-09,6;UBERON:0001178,7.86e-09,6;UBERON:0000478,2.67e-07,24;UBERON:0003210,3.98e-07,3;UBERON:0005284,5.06e-07,5;UBERON:0000412,7.61e-07,3;UBERON:0001992,7.61e-07,3 | |||
|phase1_expression=1.99846217197612,2.5692062866918,2.81908808191942,0,1.78784437770915,0,5.06599756336621,0.631719873426831,0.261185628199839,0,0,1.31064823278103,2.11013582582763,0.495065411840187,0.331397375727916,0.672325146451775,0.602694528023977,0,0,1.84681587115182,1.02000345622126,1.88072832886853,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,1.44575660953827,0,0.869079113764942,3.1811437882044,5.35298357332899,0.661743720148475,1.55210578223795,3.24988707064566,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0.112611480483322,0,0,0,0,0,0,4.96971951695318,1.64619665163954,0.529636723252875,10.3261183469573,2.12801029319014,0,0,2.22000793575444,0.933633106199299,0.538842688278752,0.163461903113459,13.6221684880438,10.37116664064,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,1.18800285728205,0.494533858557114,0,1.43723628363248,0,0,0,0.438977620880838,0,1.20190447125277,0.226864366320042,1.97328599257748,1.92201649936711,0.635795703478686,1.20036438433761,0.412210116953756,2.31876486041066,0.930584281657949,1.35021065793013,1.46155507741798,2.52433774244115,0.736399189138395,2.10139873864455,2.84007674013291,0.604512589365842,0.67824236924195,0,0,0,0,0,0,0.10366105501537,0,0,4.69348596989448,2.57296375277154,1.38134921352481,0.464367928031979,0.721879481669586,0.236613600079688,0.674338760312407,0,0,0,0.237270619111097,0,0.392442930250692,0.38474715694639,0.738155454624648,2.80483547606892,0.8231480226628,1.47008711385542,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,5.87043471179108,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,2.80327710863402,7.84728123899904,1.7601188597028,3.23179289394444,0,0,0.531876233169741,0,0,1.41849132023278,0.266422179016099,0.714889968290738,2.71310802695722,0,0.65147236858747,0.710783897485092,0.791951872933429,0.904318131178758,0.871533458600294,0.699810938274399,0,0,0,2.39624855491583,1.14861935834114,0,1.30303176000821,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,1.66376689224646,1.78428988797162,0.630809660135739,1.87426263988341,3.00946099727719,0,0,0.664225598535437,1.47495334833363,0.260650843404249,17.6221041716467,16.4708843429211,0,0,0,0.303127571446259,4.99306318531491,1.81434175997808,4.71404834855676,2.455391572609,4.2099014164961,6.15067916427365,1.53512174720011,5.46903331888265,0,0.616838775210622,4.26148140751505,1.14978018419333,2.59627214591811,0.464841513839837,0,0.200506470303285,0,0.68888668898764,0.364182336013434,0.524497659837696,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0,0.366277859273374,0.247528499761764,0,0,1.6068392984416,0.48335359146061,0.308097234229289,0.15350367472613,0.413509717453592,0.107420244868274,0,0,1.60257664164127,0.495854746082934,0,0.255225424989168,0,0,10.7036197922418,1.3940745403212,0.308033580176089,0.532306030317022,0,0.55597265731176,0.143124886741991,1.48863347743867,0.632758849437452,1.5250415513906,0.511795582622668,0.855877976067841,1.27281299170375,0,0.179872457583315,0,0.471249609382746,0.404364963146632,0,0,0,0.243713489631284,0,0,2.82810863907426,0,0,0,1.31535265576129,0,0,1.21746226177622,0.6196469961995,0.845086807596724,0.143411352204052,0.88424136911809,0.35667105148125,0,0.422215270595328,0.658589785919804,0.379473173765715,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0.593929361665277,0.307160702099232,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.511343412510774,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.769502585037971,0.455768223388005,0,0,0,0.31900115973192,1.00757352742049,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0,0,0.225980740780532,0.137041924646751,0,0,0,0,0.213452994739353,0.999048047910651,0,0,0,0,0,0,0.67952103036807,0.732219924186332,0.203996435272644,0.288950589901519,0,0,0,0.859530882839914,0,0,0,0.717873024576814,0,0,0,0.268733889946905,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0.864221491201268,0,0,0,1.36310417428337,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.74627401443437,0.934853239388898,1.10961172300523,0.378806010550178,1.0062716070103,1.77962244319307,0.457680136793847,1.20984739010591,0.466311601748341,0,0.318593534327405,0.449803112163605,0.931577741257556,2.48823724704513,2.39257543102195,4.1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| ||
|short_description=p9@COL5A1 | |short_description=p9@COL5A1 | ||
}} | }} |
Latest revision as of 08:58, 16 September 2015
Short description: | p9@COL5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_COL5A1_5end |
Coexpression cluster: | C4809_Pericytes_Mesenchymal_Fibroblast_Smooth_Chondrocyte_Preadipocyte_Lens |
Association with transcript: | 210bp_to_NM_000093, uc004cfe.2_5end |
EntrezGene: | COL5A1 |
HGNC: | 2209 |
UniProt: | P20908Q59EE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.15e-15 | 76 |
preadipocyte | 5.78e-13 | 12 |
extraembryonic cell | 7.51e-10 | 19 |
connective tissue cell | 1.22e-09 | 361 |
multi fate stem cell | 3.80e-09 | 427 |
mesenchymal cell | 6.36e-09 | 354 |
somatic stem cell | 9.17e-09 | 433 |
motile cell | 1.24e-08 | 386 |
stem cell | 2.84e-08 | 441 |
preadipocyte of the breast | 2.23e-07 | 3 |
omentum preadipocyte | 3.05e-07 | 3 |
leptomeningeal cell | 3.98e-07 | 3 |
hair follicle dermal papilla cell | 7.61e-07 | 3 |
stem cell of epidermis | 7.61e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.82e-10 | 371 |
omentum | 7.86e-09 | 6 |
peritoneum | 7.86e-09 | 6 |
abdominal cavity | 7.86e-09 | 6 |
visceral peritoneum | 7.86e-09 | 6 |
extraembryonic structure | 2.67e-07 | 24 |
blood-cerebrospinal fluid barrier | 3.98e-07 | 3 |
brain vasculature | 5.06e-07 | 5 |
dermal papilla | 7.61e-07 | 3 |
papillary layer of dermis | 7.61e-07 | 3 |