FFCP PHASE1:Hg19::chr2:241835561..241835575,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79919 | |EntrezGene=79919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26216 | |HGNC=26216 | ||
|TSSclassifier=strong | |||
|UniProt=Q08AI8 | |UniProt=Q08AI8 | ||
|association_with_transcript=0bp_to_ENST00000388934,NM_001085437,uc002wae.3_5end | |association_with_transcript=0bp_to_ENST00000388934,NM_001085437,uc002wae.3_5end | ||
|cluster_id=chr2:241835561..241835575,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_1_at_C2orf54_5end | |description=CAGE_peak_1_at_C2orf54_5end | ||
|id=chr2:241835561..241835575,- | |id=chr2:241835561..241835575,- | ||
|ontology_enrichment_celltype=CL:0002076!9.62e-16!43;CL:0000066!1.12e-11!254;CL:0000223!4.86e-10!59;CL:0002368!2.74e-09!13;CL:0002322!9.03e-08!5;CL:0002251!2.47e-07!21 | |ontology_enrichment_celltype=CL:0002076!9.62e-16!43;CL:0000066!1.12e-11!254;CL:0000223!4.86e-10!59;CL:0002368!2.74e-09!13;CL:0002322!9.03e-08!5;CL:0002251!2.47e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002553;2.12e-08;1!CL:0002251;4.30e-08;20!CL:0002563;1.20e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.19e-08,1;CL:0002251,4.05e-08,20;CL:0002563,1.03e-07,4;CL:0002076,5.47e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.65e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;1.09e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,9.44e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!9.62e-17!72;UBERON:0004119!1.12e-15!169;UBERON:0000925!1.12e-15!169;UBERON:0006595!1.12e-15!169;UBERON:0000065!1.09e-14!53;UBERON:0004921!7.24e-13!129;UBERON:0004185!7.24e-13!129;UBERON:0001007!2.01e-12!155;UBERON:0001555!2.01e-12!155;UBERON:0007026!2.01e-12!155;UBERON:0000077!7.06e-12!130;UBERON:0005178!1.07e-11!34;UBERON:0002224!1.07e-11!34;UBERON:0005181!2.97e-11!35;UBERON:0000464!2.26e-10!104;UBERON:0005153!3.08e-10!37;UBERON:0001041!9.72e-10!98;UBERON:0005911!1.56e-09!82;UBERON:0000466!7.66e-09!126;UBERON:0005157!1.24e-08!51;UBERON:0002048!1.52e-08!22;UBERON:0000117!1.52e-08!22;UBERON:0000171!1.52e-08!22;UBERON:0000170!1.52e-08!22;UBERON:0005597!1.52e-08!22;UBERON:0000118!1.52e-08!22;UBERON:0000072!1.22e-07!46;UBERON:0000915!2.11e-07!52;UBERON:0008947!3.00e-07!38;UBERON:0003258!3.00e-07!38;UBERON:0006562!5.00e-07!11;UBERON:0003104!9.35e-07!238;UBERON:0009142!9.35e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.91e-14;2!UBERON:0001723;1.92e-10;3!UBERON:0001033;1.92e-10;3!UBERON:0003929;4.36e-09;7!UBERON:0004921;8.92e-09;33!UBERON:0002372;2.44e-08;1!UBERON:0001961;2.44e-08;1!UBERON:0001744;2.44e-08;1!UBERON:0001042;2.44e-08;1!UBERON:0001735;2.44e-08;1!UBERON:0004913;2.90e-08;1!UBERON:0003703;2.90e-08;1!UBERON:0001174;2.90e-08;1!UBERON:0004914;2.90e-08;1!UBERON:0005795;3.11e-08;1!UBERON:0003350;5.22e-08;8!UBERON:0005911;1.13e-07;36!UBERON:0001242;1.20e-07;4!UBERON:0001262;1.20e-07;4!UBERON:0004786;1.20e-07;4!UBERON:0004808;1.20e-07;4!UBERON:0001277;1.20e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.31e-14,2;UBERON:0001723,1.92e-10,3;UBERON:0001033,1.92e-10,3;UBERON:0010056,1.92e-10,3;UBERON:0004119,5.01e-10,160;UBERON:0000925,5.01e-10,160;UBERON:0006595,5.01e-10,160;UBERON:0001007,5.20e-10,145;UBERON:0001555,5.20e-10,145;UBERON:0007026,5.20e-10,145;UBERON:0004921,6.93e-10,118;UBERON:0001041,5.15e-09,87;UBERON:0002372,2.52e-08,1;UBERON:0001961,2.52e-08,1;UBERON:0001744,2.52e-08,1;UBERON:0001735,2.52e-08,1;UBERON:0004913,2.90e-08,1;UBERON:0003703,2.90e-08,1;UBERON:0001174,2.90e-08,1;UBERON:0004914,2.90e-08,1;UBERON:0000072,3.68e-08,47;UBERON:0003350,4.91e-08,8;UBERON:0001242,1.03e-07,4;UBERON:0001262,1.03e-07,4;UBERON:0004786,1.03e-07,4;UBERON:0004808,1.03e-07,4;UBERON:0001277,1.03e-07,4;UBERON:0000166,1.30e-07,22;UBERON:0001004,1.92e-07,74;UBERON:0000065,5.91e-07,54;UBERON:0001042,7.17e-07,10;UBERON:0009145,7.17e-07,10 | |||
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| ||
|short_description=p1@C2orf54 | |short_description=p1@C2orf54 | ||
}} | }} |
Latest revision as of 09:06, 16 September 2015
Short description: | p1@C2orf54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C2orf54_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000388934, NM_001085437, uc002wae.3_5end |
EntrezGene: | C2orf54 |
HGNC: | 26216 |
UniProt: | Q08AI8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.19e-08 | 1 |
epithelial cell of alimentary canal | 4.05e-08 | 20 |
intestinal epithelial cell | 1.03e-07 | 4 |
endo-epithelial cell | 5.47e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 3.31e-14 | 2 |
tongue | 1.92e-10 | 3 |
gustatory system | 1.92e-10 | 3 |
future tongue | 1.92e-10 | 3 |
endoderm-derived structure | 5.01e-10 | 160 |
endoderm | 5.01e-10 | 160 |
presumptive endoderm | 5.01e-10 | 160 |
digestive system | 5.20e-10 | 145 |
digestive tract | 5.20e-10 | 145 |
primitive gut | 5.20e-10 | 145 |
subdivision of digestive tract | 6.93e-10 | 118 |
foregut | 5.15e-09 | 87 |
tonsil | 2.52e-08 | 1 |
mucosa-associated lymphoid tissue | 2.52e-08 | 1 |
lymphoid tissue | 2.52e-08 | 1 |
tonsillar ring | 2.52e-08 | 1 |
hepatopancreatic ampulla | 2.90e-08 | 1 |
extrahepatic bile duct | 2.90e-08 | 1 |
common bile duct | 2.90e-08 | 1 |
duodenal papilla | 2.90e-08 | 1 |
segment of respiratory tract | 3.68e-08 | 47 |
epithelium of mucosa | 4.91e-08 | 8 |
intestinal mucosa | 1.03e-07 | 4 |
wall of intestine | 1.03e-07 | 4 |
gastrointestinal system mucosa | 1.03e-07 | 4 |
gastrointestinal system epithelium | 1.03e-07 | 4 |
intestinal epithelium | 1.03e-07 | 4 |
oral opening | 1.30e-07 | 22 |
respiratory system | 1.92e-07 | 74 |
respiratory tract | 5.91e-07 | 54 |
chordate pharynx | 7.17e-07 | 10 |
pharyngeal region of foregut | 7.17e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 9.44e-08 | 14 |