FFCP PHASE1:Hg19::chr1:11751529..11751557,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374946 | |EntrezGene=374946 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25054 | |HGNC=25054 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NBI3 | |UniProt=Q8NBI3 | ||
|association_with_transcript=-223bp_to_NM_198545,uc001asr.1_5end | |association_with_transcript=-223bp_to_NM_198545,uc001asr.1_5end | ||
|cluster_id=chr1:11751529..11751557,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_C1orf187_5end | |description=CAGE_peak_2_at_C1orf187_5end | ||
|id=chr1:11751529..11751557,+ | |id=chr1:11751529..11751557,+ | ||
|ontology_enrichment_celltype=CL:0002319!2.16e-20!25;CL:0000133!1.52e-17!59;CL:0000047!5.17e-16!8;CL:0000221!1.40e-13!71;CL:0000128!1.72e-12!7;CL:0000126!1.72e-12!7;CL:0000127!1.72e-12!7;CL:0002453!1.72e-12!7;CL:0002322!2.68e-12!5;CL:0000540!2.49e-11!6;CL:0000031!2.49e-11!6;CL:0000404!2.49e-11!6;CL:0000095!7.87e-09!17;CL:0000123!7.87e-09!17;CL:0000064!9.49e-09!3;CL:0005012!9.49e-09!3;CL:0000067!9.49e-09!3;CL:0002304!9.49e-09!3;CL:0002603!9.99e-09!3;CL:0000623!2.75e-08!3;CL:0000825!2.75e-08!3;CL:0000243!7.01e-08!15;CL:0000125!7.01e-08!15;CL:0000030!7.01e-08!15;CL:0000339!7.01e-08!15;CL:0002605!1.13e-07!3 | |ontology_enrichment_celltype=CL:0002319!2.16e-20!25;CL:0000133!1.52e-17!59;CL:0000047!5.17e-16!8;CL:0000221!1.40e-13!71;CL:0000128!1.72e-12!7;CL:0000126!1.72e-12!7;CL:0000127!1.72e-12!7;CL:0002453!1.72e-12!7;CL:0002322!2.68e-12!5;CL:0000540!2.49e-11!6;CL:0000031!2.49e-11!6;CL:0000404!2.49e-11!6;CL:0000095!7.87e-09!17;CL:0000123!7.87e-09!17;CL:0000064!9.49e-09!3;CL:0005012!9.49e-09!3;CL:0000067!9.49e-09!3;CL:0002304!9.49e-09!3;CL:0002603!9.99e-09!3;CL:0000623!2.75e-08!3;CL:0000825!2.75e-08!3;CL:0000243!7.01e-08!15;CL:0000125!7.01e-08!15;CL:0000030!7.01e-08!15;CL:0000339!7.01e-08!15;CL:0002605!1.13e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000540;9.56e-22;6!CL:0000404;9.56e-22;6!CL:0000228;2.75e-15;1!CL:0002372;2.75e-15;1!CL:0002591;2.75e-15;1!CL:0002319;4.48e-13;25!CL:0000047;1.73e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.39e-28,8;CL:0000540,8.29e-22,6;CL:0000031,8.29e-22,6;CL:0000404,8.29e-22,6;CL:0000228,2.38e-15,1;CL:0002372,2.38e-15,1;CL:0002591,3.66e-15,1;CL:0002319,4.37e-13,25;CL:0000133,4.73e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000031;9.56e-22;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3347;1.54e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.54e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.92e-27!82;UBERON:0005743!1.91e-25!86;UBERON:0000073!3.61e-22!94;UBERON:0001016!3.61e-22!94;UBERON:0000955!1.41e-19!69;UBERON:0006238!1.41e-19!69;UBERON:0002616!5.58e-19!59;UBERON:0002020!2.44e-18!34;UBERON:0003528!2.44e-18!34;UBERON:0001049!3.60e-18!57;UBERON:0005068!3.60e-18!57;UBERON:0006241!3.60e-18!57;UBERON:0007135!3.60e-18!57;UBERON:0002346!4.72e-18!90;UBERON:0003075!1.03e-17!86;UBERON:0007284!1.03e-17!86;UBERON:0001869!1.43e-17!32;UBERON:0002791!6.39e-17!33;UBERON:0003056!9.93e-17!61;UBERON:0002780!2.32e-16!41;UBERON:0001890!2.32e-16!41;UBERON:0006240!2.32e-16!41;UBERON:0001893!2.62e-16!34;UBERON:0003080!7.33e-16!42;UBERON:0000924!4.29e-15!173;UBERON:0006601!4.29e-15!173;UBERON:0004121!1.19e-14!169;UBERON:0000033!9.08e-14!123;UBERON:0000956!4.30e-13!25;UBERON:0000203!4.30e-13!25;UBERON:0000153!9.85e-13!129;UBERON:0007811!9.85e-13!129;UBERON:0000488!6.79e-11!4;UBERON:0000369!1.04e-10!4;UBERON:0002435!1.04e-10!4;UBERON:0000204!1.04e-10!4;UBERON:0010082!1.04e-10!4;UBERON:0001950!5.35e-10!20;UBERON:0002619!6.06e-09!22;UBERON:0001778!9.49e-09!3;UBERON:0001775!9.49e-09!3;UBERON:0005383!2.19e-08!3;UBERON:0005382!2.19e-08!3;UBERON:0002203!3.11e-07!6;UBERON:0001768!3.11e-07!6;UBERON:0002037!3.84e-07!6;UBERON:0006215!3.84e-07!6;UBERON:0002420!5.13e-07!9;UBERON:0007245!5.13e-07!9;UBERON:0010009!5.13e-07!9;UBERON:0010011!5.13e-07!9;UBERON:0000454!5.13e-07!9;UBERON:0002680!8.39e-07!9;UBERON:0001895!8.39e-07!9;UBERON:0010092!8.39e-07!9;UBERON:0002308!8.83e-07!9;UBERON:0000125!8.83e-07!9 | |ontology_enrichment_uberon=UBERON:0001017!3.92e-27!82;UBERON:0005743!1.91e-25!86;UBERON:0000073!3.61e-22!94;UBERON:0001016!3.61e-22!94;UBERON:0000955!1.41e-19!69;UBERON:0006238!1.41e-19!69;UBERON:0002616!5.58e-19!59;UBERON:0002020!2.44e-18!34;UBERON:0003528!2.44e-18!34;UBERON:0001049!3.60e-18!57;UBERON:0005068!3.60e-18!57;UBERON:0006241!3.60e-18!57;UBERON:0007135!3.60e-18!57;UBERON:0002346!4.72e-18!90;UBERON:0003075!1.03e-17!86;UBERON:0007284!1.03e-17!86;UBERON:0001869!1.43e-17!32;UBERON:0002791!6.39e-17!33;UBERON:0003056!9.93e-17!61;UBERON:0002780!2.32e-16!41;UBERON:0001890!2.32e-16!41;UBERON:0006240!2.32e-16!41;UBERON:0001893!2.62e-16!34;UBERON:0003080!7.33e-16!42;UBERON:0000924!4.29e-15!173;UBERON:0006601!4.29e-15!173;UBERON:0004121!1.19e-14!169;UBERON:0000033!9.08e-14!123;UBERON:0000956!4.30e-13!25;UBERON:0000203!4.30e-13!25;UBERON:0000153!9.85e-13!129;UBERON:0007811!9.85e-13!129;UBERON:0000488!6.79e-11!4;UBERON:0000369!1.04e-10!4;UBERON:0002435!1.04e-10!4;UBERON:0000204!1.04e-10!4;UBERON:0010082!1.04e-10!4;UBERON:0001950!5.35e-10!20;UBERON:0002619!6.06e-09!22;UBERON:0001778!9.49e-09!3;UBERON:0001775!9.49e-09!3;UBERON:0005383!2.19e-08!3;UBERON:0005382!2.19e-08!3;UBERON:0002203!3.11e-07!6;UBERON:0001768!3.11e-07!6;UBERON:0002037!3.84e-07!6;UBERON:0006215!3.84e-07!6;UBERON:0002420!5.13e-07!9;UBERON:0007245!5.13e-07!9;UBERON:0010009!5.13e-07!9;UBERON:0010011!5.13e-07!9;UBERON:0000454!5.13e-07!9;UBERON:0002680!8.39e-07!9;UBERON:0001895!8.39e-07!9;UBERON:0010092!8.39e-07!9;UBERON:0002308!8.83e-07!9;UBERON:0000125!8.83e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.91e-10;49!UBERON:0000078;2.67e-08;2!UBERON:0002012;2.67e-08;2!UBERON:0008886;2.67e-08;2!UBERON:0001950;8.77e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.75e-13,81;UBERON:0001016,1.10e-11,89;UBERON:0000078,3.08e-08,2;UBERON:0007497,3.08e-08,2;UBERON:0003643,3.08e-08,2;UBERON:0003504,3.08e-08,2;UBERON:0003469,3.08e-08,2;UBERON:0003496,3.08e-08,2;UBERON:0002012,3.08e-08,2;UBERON:0008886,3.08e-08,2;UBERON:0007303,3.08e-08,2;UBERON:0002061,3.08e-08,2;UBERON:0005432,3.08e-08,2;UBERON:0004363,3.08e-08,2;UBERON:0004121,4.11e-07,171;UBERON:0000924,4.11e-07,171;UBERON:0006601,4.11e-07,171;UBERON:0001950,8.77e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0.408001382488506,1.25381888591235,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818718450173537,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0.795285947051099,0,0.756278537312543,0.665188192387692,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,1.34759371519982,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0.197030760201927,0.646882724578552,0.641715181398742,0.508189248444927,3.90419561572865,1.54657762555539,2.84777651068393,2.55175500661265,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.98068990005971,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,8.57003732565372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0,0.415440338029185,0,0,0.364497339948148,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0,0,0,0,0,0.124980407962107,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991486114072017,0,0,0,0,0,0,0.642292250964595,0,0,0,12.8556565073076,0,0,0,0,0,0,0,0,2.7614397042404,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,4.92277328116398,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,11.7814686391902,0,0,0,0,0.756998549010474,0.327796715891087,0,0.203977659483963,0,0.18378979906969,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0.408001382488506,1.25381888591235,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818718450173537,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0.795285947051099,0,0.756278537312543,0.665188192387692,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,1.34759371519982,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0.197030760201927,0.646882724578552,0.641715181398742,0.508189248444927,3.90419561572865,1.54657762555539,2.84777651068393,2.55175500661265,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.98068990005971,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,8.57003732565372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0,0.415440338029185,0,0,0.364497339948148,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0,0,0,0,0,0.124980407962107,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991486114072017,0,0,0,0,0,0,0.642292250964595,0,0,0,12.8556565073076,0,0,0,0,0,0,0,0,2.7614397042404,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,4.92277328116398,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,11.7814686391902,0,0,0,0,0.756998549010474,0.327796715891087,0,0.203977659483963,0,0.18378979906969,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@C1orf187 | |short_description=p2@C1orf187 | ||
}} | }} |
Latest revision as of 09:51, 16 September 2015
Short description: | p2@C1orf187 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1orf187_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -223bp_to_NM_198545, uc001asr.1_5end |
EntrezGene: | C1orf187 |
HGNC: | 25054 |
UniProt: | Q8NBI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.39e-28 | 8 |
neuron | 8.29e-22 | 6 |
neuroblast | 8.29e-22 | 6 |
electrically signaling cell | 8.29e-22 | 6 |
multinucleate cell | 2.38e-15 | 1 |
myotube | 2.38e-15 | 1 |
smooth muscle cell of the pulmonary artery | 3.66e-15 | 1 |
neural cell | 4.37e-13 | 25 |
neurectodermal cell | 4.73e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.75e-13 | 81 |
nervous system | 1.10e-11 | 89 |
mixed ectoderm/mesoderm/endoderm-derived structure | 3.08e-08 | 2 |
developing epithelial placode | 3.08e-08 | 2 |
respiratory system arterial blood vessel | 3.08e-08 | 2 |
respiratory system blood vessel | 3.08e-08 | 2 |
respiratory system artery | 3.08e-08 | 2 |
head blood vessel | 3.08e-08 | 2 |
pulmonary artery | 3.08e-08 | 2 |
pulmonary vascular system | 3.08e-08 | 2 |
pharyngeal vasculature | 3.08e-08 | 2 |
truncus arteriosus | 3.08e-08 | 2 |
aortic sac | 3.08e-08 | 2 |
pharyngeal arch artery | 3.08e-08 | 2 |
ectoderm-derived structure | 4.11e-07 | 171 |
ectoderm | 4.11e-07 | 171 |
presumptive ectoderm | 4.11e-07 | 171 |
neocortex | 8.77e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.54e-15 | 1 |