FFCP PHASE1:Hg19::chr4:159122728..159122766,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55314 | |EntrezGene=55314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25633 | |HGNC=25633 | ||
|TSSclassifier=strong | |||
|UniProt=D6RDN8,D6RAX5 | |UniProt=D6RDN8,D6RAX5 | ||
|association_with_transcript=0bp_to_ENST00000505049,ENST00000505189,ENST00000511038_5end | |association_with_transcript=0bp_to_ENST00000505049,ENST00000505189,ENST00000511038_5end | ||
|cluster_id=chr4:159122728..159122766,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_9_at_TMEM144_5end | |description=CAGE_peak_9_at_TMEM144_5end | ||
|id=chr4:159122728..159122766,+ | |id=chr4:159122728..159122766,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.79e-62!42;CL:0000860!9.01e-58!45;CL:0002009!7.70e-52!65;CL:0002194!1.70e-50!63;CL:0000576!1.70e-50!63;CL:0000040!1.70e-50!63;CL:0000559!1.70e-50!63;CL:0000557!9.25e-47!71;CL:0000839!1.22e-44!70;CL:0000766!1.81e-40!76;CL:0000763!1.60e-26!112;CL:0000049!1.60e-26!112;CL:0002087!4.35e-26!119;CL:0002031!1.08e-24!124;CL:0000738!2.66e-22!140;CL:0000037!1.73e-16!172;CL:0000566!1.73e-16!172;CL:0002032!2.21e-16!165;CL:0000837!2.21e-16!165;CL:0000988!4.28e-15!182 | |ontology_enrichment_celltype=CL:0002057!1.79e-62!42;CL:0000860!9.01e-58!45;CL:0002009!7.70e-52!65;CL:0002194!1.70e-50!63;CL:0000576!1.70e-50!63;CL:0000040!1.70e-50!63;CL:0000559!1.70e-50!63;CL:0000557!9.25e-47!71;CL:0000839!1.22e-44!70;CL:0000766!1.81e-40!76;CL:0000763!1.60e-26!112;CL:0000049!1.60e-26!112;CL:0002087!4.35e-26!119;CL:0002031!1.08e-24!124;CL:0000738!2.66e-22!140;CL:0000037!1.73e-16!172;CL:0000566!1.73e-16!172;CL:0002032!2.21e-16!165;CL:0000837!2.21e-16!165;CL:0000988!4.28e-15!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.43e-103;33!CL:0002057;9.43e-103;33!CL:0000473;4.05e-68;39!CL:0000234;4.05e-68;39!CL:0000576;4.33e-45;48!CL:0000766;1.46e-27;69!CL:0000763;5.72e-11;100!CL:0002087;1.25e-10;104!CL:0000738;4.97e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.35e-85,42;CL:0002057,1.35e-85,42;CL:0000473,2.07e-74,48;CL:0000234,2.07e-74,48;CL:0002194,9.56e-59,59;CL:0000576,9.56e-59,59;CL:0000040,9.56e-59,59;CL:0000559,9.56e-59,59;CL:0002009,1.01e-56,61;CL:0000839,3.40e-52,66;CL:0000557,2.28e-51,67;CL:0000766,1.41e-47,72;CL:0000763,1.56e-30,108;CL:0000049,1.56e-30,108;CL:0002087,1.92e-28,115;CL:0002031,4.24e-27,120;CL:0000738,1.88e-23,136;CL:0002032,3.42e-19,161;CL:0000837,3.42e-19,161;CL:0000037,3.17e-18,168;CL:0000988,4.31e-17,177;CL:0000134,2.92e-07,354;CL:0002320,4.93e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.23e-62;42!CL:0000049;5.82e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.49e-40!80;UBERON:0001474!3.92e-37!86;UBERON:0002390!6.08e-34!102;UBERON:0003061!6.08e-34!102;UBERON:0004765!2.43e-32!101;UBERON:0001434!2.43e-32!101;UBERON:0002193!4.16e-30!112;UBERON:0002405!2.73e-27!115;UBERON:0003081!1.89e-19!216;UBERON:0002204!4.31e-16!167;UBERON:0000926!9.75e-10!448;UBERON:0004120!9.75e-10!448;UBERON:0006603!9.75e-10!448;UBERON:0000062!8.16e-09!511;UBERON:0000923!3.55e-07!604;UBERON:0005291!3.55e-07!604;UBERON:0006598!3.55e-07!604;UBERON:0002532!3.55e-07!604;UBERON:0002050!3.83e-07!605;UBERON:0005423!3.83e-07!605;UBERON:0000922!6.52e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.71e-45,76;UBERON:0001474,2.30e-41,82;UBERON:0004765,2.25e-37,90;UBERON:0002405,4.72e-36,93;UBERON:0002390,5.00e-34,98;UBERON:0003061,5.00e-34,98;UBERON:0001434,2.84e-33,100;UBERON:0002193,1.56e-30,108;UBERON:0002204,2.33e-18,167;UBERON:0003081,6.75e-16,203;UBERON:0000926,6.37e-11,315;UBERON:0004120,6.37e-11,315;UBERON:0006603,6.37e-11,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,3.40088349319928,0,1.39457422143411,8.63452564845834,4.95530193432166,2.58923153089935,7.68482119587302,5.43909128743746,1.03423704220986,8.39130088658974,4.06279459783025,0.941211697713023,4.09359225086769,3.59557575112135,1.22433556948361,7.06043859567406,3.19668562899521,0.989553900560148,3.98927315243264,1.70489900213078,0.870627715885752,2.8369261234557,0.622822248995575,6.53246529667532,7.30076085788282,10.4250645458456,0,2.94622108790052,2.21523671208619,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8359493987758,0,0,0,0.522389211897802,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936017060556951,0.594524649154913,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14280734351315,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9149207082341,32.4236597488976,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,3.40088349319928,0,1.39457422143411,8.63452564845834,4.95530193432166,2.58923153089935,7.68482119587302,5.43909128743746,1.03423704220986,8.39130088658974,4.06279459783025,0.941211697713023,4.09359225086769,3.59557575112135,1.22433556948361,7.06043859567406,3.19668562899521,0.989553900560148,3.98927315243264,1.70489900213078,0.870627715885752,2.8369261234557,0.622822248995575,6.53246529667532,7.30076085788282,10.4250645458456,0,2.94622108790052,2.21523671208619,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8359493987758,0,0,0,0.522389211897802,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936017060556951,0.594524649154913,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14280734351315,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9149207082341,32.4236597488976,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@TMEM144 | |short_description=p9@TMEM144 | ||
}} | }} |
Latest revision as of 10:26, 16 September 2015
Short description: | p9@TMEM144 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TMEM144_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000505049, ENST00000505189, ENST00000511038_5end |
EntrezGene: | TMEM144 |
HGNC: | 25633 |
UniProt: | D6RDN8D6RAX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.35e-85 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-85 | 42 |
defensive cell | 2.07e-74 | 48 |
phagocyte | 2.07e-74 | 48 |
monopoietic cell | 9.56e-59 | 59 |
monocyte | 9.56e-59 | 59 |
monoblast | 9.56e-59 | 59 |
promonocyte | 9.56e-59 | 59 |
macrophage dendritic cell progenitor | 1.01e-56 | 61 |
myeloid lineage restricted progenitor cell | 3.40e-52 | 66 |
granulocyte monocyte progenitor cell | 2.28e-51 | 67 |
myeloid leukocyte | 1.41e-47 | 72 |
myeloid cell | 1.56e-30 | 108 |
common myeloid progenitor | 1.56e-30 | 108 |
nongranular leukocyte | 1.92e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 4.24e-27 | 120 |
leukocyte | 1.88e-23 | 136 |
hematopoietic oligopotent progenitor cell | 3.42e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.42e-19 | 161 |
hematopoietic stem cell | 3.17e-18 | 168 |
hematopoietic cell | 4.31e-17 | 177 |
mesenchymal cell | 2.92e-07 | 354 |
connective tissue cell | 4.93e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.71e-45 | 76 |
bone element | 2.30e-41 | 82 |
skeletal element | 2.25e-37 | 90 |
immune system | 4.72e-36 | 93 |
hematopoietic system | 5.00e-34 | 98 |
blood island | 5.00e-34 | 98 |
skeletal system | 2.84e-33 | 100 |
hemolymphoid system | 1.56e-30 | 108 |
musculoskeletal system | 2.33e-18 | 167 |
lateral plate mesoderm | 6.75e-16 | 203 |
mesoderm | 6.37e-11 | 315 |
mesoderm-derived structure | 6.37e-11 | 315 |
presumptive mesoderm | 6.37e-11 | 315 |