FFCP PHASE1:Hg19::chr6:158490457..158490470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8871 | |EntrezGene=8871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11504 | |HGNC=11504 | ||
|TSSclassifier=strong | |||
|UniProt=B4DLC4 | |UniProt=B4DLC4 | ||
|association_with_transcript=-90bp_to_AK296935_5end | |association_with_transcript=-90bp_to_AK296935_5end | ||
|cluster_id=chr6:158490457..158490470,+ | |||
|description=CAGE_peak_10_at_SYNJ2_5end | |description=CAGE_peak_10_at_SYNJ2_5end | ||
|id=chr6:158490457..158490470,+ | |id=chr6:158490457..158490470,+ | ||
|ontology_enrichment_celltype=CL:0000708!3.34e-09!3;CL:0002564!5.37e-09!3;CL:0000064!6.44e-09!3;CL:0005012!6.44e-09!3;CL:0000067!6.44e-09!3;CL:0002304!6.44e-09!3;CL:0002622!1.07e-07!3;CL:0002602!7.52e-07!2 | |ontology_enrichment_celltype=CL:0000708!3.34e-09!3;CL:0002564!5.37e-09!3;CL:0000064!6.44e-09!3;CL:0005012!6.44e-09!3;CL:0000067!6.44e-09!3;CL:0002304!6.44e-09!3;CL:0002622!1.07e-07!3;CL:0002602!7.52e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000708;1.48e-35;3!CL:0002602;4.12e-25;2!CL:0002564;2.03e-16;3!CL:0000342;6.05e-13;1!CL:0002565;6.05e-13;1!CL:0002569;1.12e-08;6!CL:0000327;1.35e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,1.24e-35,3;CL:0002602,3.89e-25,2;CL:0002564,1.49e-16,3;CL:0000342,3.76e-13,1;CL:0002565,3.76e-13,1;CL:0002569,1.00e-08,6;CL:0000327,1.31e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;2.28e-07;2!DOID:1907;2.28e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,2.28e-07,2;DOID:1907,2.28e-07,2 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0011135,3.68e-38,5;UBERON:0002216,3.68e-38,5;UBERON:0011134,3.68e-38,5;UBERON:0002209,3.68e-38,5;UBERON:0002213,3.68e-38,5;UBERON:0005856,3.68e-38,5;UBERON:0005866,3.68e-38,5;UBERON:0005863,3.68e-38,5;UBERON:0007844,3.68e-38,5;UBERON:0011138,3.68e-38,5;UBERON:0001130,3.68e-38,5;UBERON:0001066,3.68e-38,5;UBERON:0001468,3.68e-38,5;UBERON:0003210,1.24e-35,3;UBERON:0006444,3.89e-25,2;UBERON:0001995,3.89e-25,2;UBERON:0004715,3.89e-25,2;UBERON:0004905,5.24e-24,8;UBERON:0000982,5.24e-24,8;UBERON:0004770,5.24e-24,8;UBERON:0002418,4.17e-17,3;UBERON:0004755,4.17e-17,3;UBERON:0002242,1.49e-16,3;UBERON:0003068,1.49e-16,3;UBERON:0002328,1.49e-16,3;UBERON:0004880,1.49e-16,3;UBERON:0002506,3.76e-13,1;UBERON:0001769,3.76e-13,1;UBERON:0000488,1.23e-12,4;UBERON:0000075,3.74e-12,16;UBERON:0006876,3.24e-10,11;UBERON:0002203,1.00e-08,6;UBERON:0001768,1.00e-08,6;UBERON:0002200,1.00e-08,6;UBERON:0003422,1.00e-08,6 | |||
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| ||
|short_description=p10@SYNJ2 | |short_description=p10@SYNJ2 | ||
}} | }} |
Latest revision as of 11:33, 16 September 2015
Short description: | p10@SYNJ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SYNJ2_5end |
Coexpression cluster: | NA |
Association with transcript: | -90bp_to_AK296935_5end |
EntrezGene: | SYNJ2 |
HGNC: | 11504 |
UniProt: | B4DLC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 1.24e-35 | 3 |
annulus pulposus cell | 3.89e-25 | 2 |
nucleus pulposus cell of intervertebral disc | 1.49e-16 | 3 |
pigment cell (sensu Vertebrata) | 3.76e-13 | 1 |
iris pigment epithelial cell | 3.76e-13 | 1 |
mesenchymal stem cell of umbilical cord | 1.00e-08 | 6 |
extracellular matrix secreting cell | 1.31e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 2.28e-07 | 2 |
malignant fibroxanthoma | 2.28e-07 | 2 |