FFCP PHASE1:Hg19::chr9:139377474..139377525,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9919 | |EntrezGene=9919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29006 | |HGNC=29006 | ||
|TSSclassifier=strong | |||
|UniProt=O15027 | |UniProt=O15027 | ||
|association_with_transcript=0bp_to_NM_014866,uc004chx.2,uc010nbo.1_5end | |association_with_transcript=0bp_to_NM_014866,uc004chx.2,uc010nbo.1_5end | ||
|cluster_id=chr9:139377474..139377525,- | |||
|description=CAGE_peak_1_at_SEC16A_5end | |description=CAGE_peak_1_at_SEC16A_5end | ||
|id=chr9:139377474..139377525,- | |id=chr9:139377474..139377525,- | ||
|ontology_enrichment_celltype=CL:0000766!2.83e-13!76;CL:0002057!4.10e-12!42;CL:0000860!5.95e-12!45;CL:0000738!5.57e-11!140;CL:0000557!5.05e-10!71;CL:0002009!5.74e-09!65;CL:0002194!7.59e-09!63;CL:0000576!7.59e-09!63;CL:0000040!7.59e-09!63;CL:0000559!7.59e-09!63;CL:0000839!1.15e-08!70;CL:0000988!9.58e-08!182;CL:0000763!2.26e-07!112;CL:0000049!2.26e-07!112;CL:0002087!9.76e-07!119 | |ontology_enrichment_celltype=CL:0000766!2.83e-13!76;CL:0002057!4.10e-12!42;CL:0000860!5.95e-12!45;CL:0000738!5.57e-11!140;CL:0000557!5.05e-10!71;CL:0002009!5.74e-09!65;CL:0002194!7.59e-09!63;CL:0000576!7.59e-09!63;CL:0000040!7.59e-09!63;CL:0000559!7.59e-09!63;CL:0000839!1.15e-08!70;CL:0000988!9.58e-08!182;CL:0000763!2.26e-07!112;CL:0000049!2.26e-07!112;CL:0002087!9.76e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.77e-14;33!CL:0002057;1.77e-14;33!CL:0000473;8.85e-09;39!CL:0000234;8.85e-09;39!CL:0000576;4.65e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.72e-13,72;CL:0000860,4.10e-12,42;CL:0002057,4.10e-12,42;CL:0000738,1.15e-10,136;CL:0000557,9.00e-10,67;CL:0000473,9.14e-09,48;CL:0000234,9.14e-09,48;CL:0002009,1.02e-08,61;CL:0002194,1.34e-08,59;CL:0000576,1.34e-08,59;CL:0000040,1.34e-08,59;CL:0000559,1.34e-08,59;CL:0000839,2.10e-08,66;CL:0000988,2.04e-07,177;CL:0000763,4.37e-07,108;CL:0000049,4.37e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.01e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.12e-14!112;UBERON:0003081!2.32e-13!216;UBERON:0002390!3.90e-13!102;UBERON:0003061!3.90e-13!102;UBERON:0002405!3.59e-10!115;UBERON:0001474!4.90e-10!86;UBERON:0002371!6.65e-10!80;UBERON:0004765!7.39e-07!101;UBERON:0001434!7.39e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.41e-13,108;UBERON:0003081,5.48e-13,203;UBERON:0002390,7.50e-13,98;UBERON:0003061,7.50e-13,98;UBERON:0002405,1.13e-10,93;UBERON:0001474,9.27e-10,82;UBERON:0002371,1.24e-09,76;UBERON:0004765,4.18e-07,90 | |||
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| ||
|short_description=p1@SEC16A | |short_description=p1@SEC16A | ||
}} | }} |
Latest revision as of 12:09, 16 September 2015
Short description: | p1@SEC16A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEC16A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_014866, uc004chx.2, uc010nbo.1_5end |
EntrezGene: | SEC16A |
HGNC: | 29006 |
UniProt: | O15027 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.72e-13 | 72 |
classical monocyte | 4.10e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.10e-12 | 42 |
leukocyte | 1.15e-10 | 136 |
granulocyte monocyte progenitor cell | 9.00e-10 | 67 |
defensive cell | 9.14e-09 | 48 |
phagocyte | 9.14e-09 | 48 |
macrophage dendritic cell progenitor | 1.02e-08 | 61 |
monopoietic cell | 1.34e-08 | 59 |
monocyte | 1.34e-08 | 59 |
monoblast | 1.34e-08 | 59 |
promonocyte | 1.34e-08 | 59 |
myeloid lineage restricted progenitor cell | 2.10e-08 | 66 |
hematopoietic cell | 2.04e-07 | 177 |
myeloid cell | 4.37e-07 | 108 |
common myeloid progenitor | 4.37e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.41e-13 | 108 |
lateral plate mesoderm | 5.48e-13 | 203 |
hematopoietic system | 7.50e-13 | 98 |
blood island | 7.50e-13 | 98 |
immune system | 1.13e-10 | 93 |
bone element | 9.27e-10 | 82 |
bone marrow | 1.24e-09 | 76 |
skeletal element | 4.18e-07 | 90 |