FFCP PHASE1:Hg19::chr7:134832808..134832879,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:134832808..134832879,+
|short_description=p1@TMEM140
|description=CAGE_peak_1_at_TMEM140_5end
|association_with_transcript=0bp_to_ENST00000275767_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55281 | |EntrezGene=55281 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21870 | |HGNC=21870 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NV12 | |UniProt=Q9NV12 | ||
|association_with_transcript=0bp_to_ENST00000275767_5end | |||
|cluster_id=chr7:134832808..134832879,+ | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_1_at_TMEM140_5end | |||
|id=chr7:134832808..134832879,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.23e-28!140;CL:0002087!2.40e-25!119;CL:0002031!1.34e-24!124;CL:0002057!2.27e-23!42;CL:0000766!1.05e-21!76;CL:0000860!2.05e-19!45;CL:0000839!3.16e-18!70;CL:0002194!1.98e-17!63;CL:0000576!1.98e-17!63;CL:0000040!1.98e-17!63;CL:0000559!1.98e-17!63;CL:0002009!4.96e-16!65;CL:0002032!7.53e-16!165;CL:0000837!7.53e-16!165;CL:0000037!9.11e-16!172;CL:0000566!9.11e-16!172;CL:0000557!2.74e-15!71;CL:0000988!3.70e-14!182;CL:0000763!1.09e-08!112;CL:0000049!1.09e-08!112;CL:0000838!3.35e-08!52;CL:0000542!7.44e-08!53;CL:0000051!7.44e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.07e-19;33!CL:0002057;6.07e-19;33!CL:0000473;6.13e-17;39!CL:0000234;6.13e-17;39!CL:0000576;3.79e-14;48!CL:0000766;4.58e-12;69!CL:0002087;3.04e-09;104!CL:0000738;2.75e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.05e-32,136;CL:0002087,1.06e-28,115;CL:0002031,3.47e-28,120;CL:0000766,2.94e-26,72;CL:0000473,3.01e-25,48;CL:0000234,3.01e-25,48;CL:0000860,5.70e-24,42;CL:0002057,5.70e-24,42;CL:0000839,1.89e-22,66;CL:0002194,8.61e-22,59;CL:0000576,8.61e-22,59;CL:0000040,8.61e-22,59;CL:0000559,8.61e-22,59;CL:0002009,3.24e-20,61;CL:0000557,2.85e-19,67;CL:0002032,4.27e-18,161;CL:0000837,4.27e-18,161;CL:0000037,1.05e-17,168;CL:0000988,1.03e-15,177;CL:0000763,8.10e-11,108;CL:0000049,8.10e-11,108;CL:0000838,3.93e-08,52;CL:0000542,1.29e-07,53;CL:0000051,1.29e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.87e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.02e-27!115;UBERON:0002193!3.27e-21!112;UBERON:0002390!1.13e-19!102;UBERON:0003061!1.13e-19!102;UBERON:0002405!3.62e-18!115;UBERON:0002371!2.55e-14!80;UBERON:0001474!1.73e-11!86;UBERON:0004765!2.88e-09!101;UBERON:0001434!2.88e-09!101;UBERON:0003081!2.12e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.78e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.67e-27,114;UBERON:0002193,8.23e-25,108;UBERON:0002390,2.92e-23,98;UBERON:0003061,2.92e-23,98;UBERON:0002405,9.26e-21,93;UBERON:0002371,6.17e-18,76;UBERON:0001474,1.63e-14,82;UBERON:0004765,6.00e-13,90;UBERON:0001434,2.04e-11,100;UBERON:0003081,3.21e-10,203 | |||
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| ||
|short_description=p1@TMEM140 | |||
}} | }} |
Latest revision as of 12:50, 16 September 2015
Short description: | p1@TMEM140 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM140_5end |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | 0bp_to_ENST00000275767_5end |
EntrezGene: | TMEM140 |
HGNC: | 21870 |
UniProt: | Q9NV12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.05e-32 | 136 |
nongranular leukocyte | 1.06e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 3.47e-28 | 120 |
myeloid leukocyte | 2.94e-26 | 72 |
defensive cell | 3.01e-25 | 48 |
phagocyte | 3.01e-25 | 48 |
classical monocyte | 5.70e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.70e-24 | 42 |
myeloid lineage restricted progenitor cell | 1.89e-22 | 66 |
monopoietic cell | 8.61e-22 | 59 |
monocyte | 8.61e-22 | 59 |
monoblast | 8.61e-22 | 59 |
promonocyte | 8.61e-22 | 59 |
macrophage dendritic cell progenitor | 3.24e-20 | 61 |
granulocyte monocyte progenitor cell | 2.85e-19 | 67 |
hematopoietic oligopotent progenitor cell | 4.27e-18 | 161 |
hematopoietic multipotent progenitor cell | 4.27e-18 | 161 |
hematopoietic stem cell | 1.05e-17 | 168 |
hematopoietic cell | 1.03e-15 | 177 |
myeloid cell | 8.10e-11 | 108 |
common myeloid progenitor | 8.10e-11 | 108 |
lymphoid lineage restricted progenitor cell | 3.93e-08 | 52 |
lymphocyte | 1.29e-07 | 53 |
common lymphoid progenitor | 1.29e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.67e-27 | 114 |
hemolymphoid system | 8.23e-25 | 108 |
hematopoietic system | 2.92e-23 | 98 |
blood island | 2.92e-23 | 98 |
immune system | 9.26e-21 | 93 |
bone marrow | 6.17e-18 | 76 |
bone element | 1.63e-14 | 82 |
skeletal element | 6.00e-13 | 90 |
skeletal system | 2.04e-11 | 100 |
lateral plate mesoderm | 3.21e-10 | 203 |