FFCP PHASE1:Hg19::chr9:139565126..139565129,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:139565126..139565129,+
|short_description=p1@MIR126
|description=CAGE_peak_1_at_MIR126_5end
|association_with_transcript=72bp_to_NR_029695_5end
|EntrezGen...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=406913 | |EntrezGene=406913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31508 | |HGNC=31508 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=72bp_to_NR_029695_5end | |||
|cluster_id=chr9:139565126..139565129,+ | |||
|description=CAGE_peak_1_at_MIR126_5end | |||
|id=chr9:139565126..139565129,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.62e-31!24;CL:0000115!2.03e-23!35;CL:0000071!2.45e-22!18;CL:0002546!2.45e-22!18;CL:0002078!5.41e-17!44;CL:1000413!6.57e-15!9;CL:0000213!1.12e-12!57;CL:0000215!1.12e-12!57;CL:0005020!7.73e-11!6;CL:0002138!7.73e-11!6;CL:0005022!7.73e-11!6;CL:0002544!1.86e-10!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.67e-50;24!CL:0000071;1.87e-37;18!CL:0000115;3.90e-28;36!CL:0002078;1.49e-19;45!CL:1000413;2.95e-19;9!CL:0002144;3.27e-16;3!CL:0002618;1.71e-15;3!CL:0002138;2.74e-14;6!CL:0000213;3.74e-14;58!CL:0000215;3.74e-14;58!CL:0002544;2.26e-13;6!CL:0002545;3.78e-11;2!CL:0002543;5.56e-08;6!CL:0000076;2.14e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.86e-50,24;CL:0000071,1.33e-37,18;CL:0002546,1.33e-37,18;CL:0000115,6.73e-37,36;CL:0002078,9.90e-29,45;CL:0000213,3.57e-24,58;CL:0000215,3.57e-24,58;CL:1000413,1.46e-19,9;CL:0002144,3.12e-16,3;CL:0002618,3.11e-15,3;CL:0005020,2.70e-14,6;CL:0002138,2.70e-14,6;CL:0005022,2.70e-14,6;CL:0002544,1.16e-13,6;CL:0002545,2.59e-11,2;CL:0000076,1.19e-10,63;CL:0000222,1.80e-09,121;CL:0002543,7.43e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.87e-37;18!CL:0005022;2.74e-14;6!UBERON:0005062;2.20e-11;4!UBERON:0007284;2.20e-11;4 | |||
|ontology_enrichment_disease=DOID:1036!4.53e-09!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-39!115;UBERON:0004111!1.33e-22!241;UBERON:0001986!2.45e-22!18;UBERON:0004638!2.45e-22!18;UBERON:0004852!2.45e-22!18;UBERON:0000487!7.21e-20!22;UBERON:0000477!4.21e-19!286;UBERON:0000025!2.76e-17!194;UBERON:0006914!8.03e-17!25;UBERON:0001049!1.95e-16!57;UBERON:0005068!1.95e-16!57;UBERON:0006241!1.95e-16!57;UBERON:0007135!1.95e-16!57;UBERON:0003080!2.46e-15!42;UBERON:0003915!6.57e-15!9;UBERON:0004700!6.57e-15!9;UBERON:0001917!6.57e-15!9;UBERON:0002780!2.59e-14!41;UBERON:0001890!2.59e-14!41;UBERON:0006240!2.59e-14!41;UBERON:0002020!7.02e-14!34;UBERON:0003528!7.02e-14!34;UBERON:0002346!1.79e-13!90;UBERON:0002616!3.08e-13!59;UBERON:0003075!8.74e-13!86;UBERON:0007284!8.74e-13!86;UBERON:0002791!1.12e-12!33;UBERON:0001893!3.72e-12!34;UBERON:0000055!4.25e-11!69;UBERON:0001869!2.91e-10!32;UBERON:0000955!5.65e-10!69;UBERON:0006238!5.65e-10!69;UBERON:0002619!9.93e-10!22;UBERON:0000483!1.06e-09!309;UBERON:0005743!1.44e-09!86;UBERON:0001017!1.55e-09!82;UBERON:0003056!1.57e-09!61;UBERON:0000119!1.98e-09!312;UBERON:0002049!1.01e-08!79;UBERON:0007798!1.01e-08!79;UBERON:0000956!3.30e-08!25;UBERON:0000203!3.30e-08!25;UBERON:0004872!4.35e-08!84;UBERON:0000073!6.38e-08!94;UBERON:0001016!6.38e-08!94;UBERON:0002308!6.64e-08!9;UBERON:0000125!6.64e-08!9;UBERON:0002465!7.13e-08!10;UBERON:0001473!7.53e-08!8;UBERON:0004536!7.53e-08!8;UBERON:0006558!7.53e-08!8;UBERON:0001950!1.08e-07!20;UBERON:0001981!2.83e-07!60;UBERON:0007500!2.83e-07!60;UBERON:0004537!2.83e-07!60;UBERON:0006965!2.83e-07!60;UBERON:0000153!6.23e-07!129;UBERON:0007811!6.23e-07!129;UBERON:0002298!7.91e-07!8;UBERON:0001009!9.79e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.87e-37;18!UBERON:0001986;1.87e-37;18!UBERON:0004852;1.87e-37;18!UBERON:0000487;1.98e-35;22!UBERON:0006914;7.64e-31;25!UBERON:0000490;1.71e-20;33!UBERON:0003915;2.95e-19;9!UBERON:0004700;2.95e-19;9!UBERON:0001917;2.95e-19;9!UBERON:0010523;3.27e-16;3!UBERON:0001915;3.27e-16;3!UBERON:0001982;3.27e-16;3!UBERON:0003978;5.30e-15;3!UBERON:0000946;5.30e-15;3!UBERON:0005800;3.78e-11;2!UBERON:0001515;3.78e-11;2!UBERON:0001473;9.83e-11;8!UBERON:0004536;9.83e-11;8!UBERON:0006558;9.83e-11;8!UBERON:0002133;1.41e-10;2!UBERON:0000055;9.12e-10;65!UBERON:0002066;1.72e-09;5!UBERON:0002465;1.36e-08;10!UBERON:0002049;4.38e-07;75!UBERON:0007798;4.38e-07;75!UBERON:0007500;4.72e-07;56!UBERON:0001981;4.72e-07;56!UBERON:0004537;4.72e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.33e-37,18;UBERON:0001986,1.33e-37,18;UBERON:0004852,1.33e-37,18;UBERON:0000487,1.19e-35,22;UBERON:0006914,4.91e-31,25;UBERON:0000055,2.25e-22,68;UBERON:0003915,1.46e-19,9;UBERON:0004700,1.46e-19,9;UBERON:0001917,1.46e-19,9;UBERON:0002049,6.05e-19,78;UBERON:0007798,6.05e-19,78;UBERON:0010523,3.12e-16,3;UBERON:0001915,3.12e-16,3;UBERON:0001982,3.12e-16,3;UBERON:0007500,1.12e-15,59;UBERON:0001981,1.12e-15,59;UBERON:0004537,1.12e-15,59;UBERON:0006965,1.12e-15,59;UBERON:0003978,2.00e-15,3;UBERON:0009751,2.00e-15,3;UBERON:0000946,2.00e-15,3;UBERON:0002523,2.00e-15,3;UBERON:0005983,2.00e-15,3;UBERON:0002165,2.00e-15,3;UBERON:0002062,2.00e-15,3;UBERON:0007280,2.00e-15,3;UBERON:0001009,2.37e-13,112;UBERON:0004111,3.13e-13,240;UBERON:0004535,2.49e-12,109;UBERON:0004872,8.93e-12,83;UBERON:0005800,2.59e-11,2;UBERON:0001515,2.59e-11,2;UBERON:0002133,9.09e-11,2;UBERON:0001473,9.75e-11,8;UBERON:0004536,9.75e-11,8;UBERON:0006558,9.75e-11,8;UBERON:0000025,2.20e-10,192;UBERON:0002066,2.44e-09,5;UBERON:0002465,1.35e-08,10;UBERON:0003914,1.68e-08,117;UBERON:0004876,1.24e-07,11;UBERON:0004797,7.16e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.38856200643038,1.69592382577203,1.25849830862972,2.75118041940067,0.626984899610432,5.68516870172524,3.5576626268671,3.01248551488203,2.41697590265488,3.04108842287405,2.68468263302986,4.04429388380456,1.62028389576352,3.03619076165871,1.34717623575702,1.0135033243499,0,0,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.653847612453835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,2.47330397904978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680374821106063,0.431831832204279,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,1.06606955203727,0,0.31396051279005,0.831058409500782,0.676786981851542,1.37243774022418,1.1747511088309,0.948768663620925,0.317873157960757,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0.202203398942031,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0,1.09524303113594,0,0,0,1.39641200636127,1.83328339209347,1.43574604915363,0.599037001496973,1.28767814440971,0,0.335917362433631,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0.258565912723101,2.24795422962573,0,0,0.106787412567695,1.10043013569766,2.89967338743037,0,0,0,0,0,0.2506898940227,0,0,0,0,0,1.8778639605975,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,1.03343398250592,0.126831620387814,0,0,4.96211178389294,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0.354809480650555,0,0,0,0.0657727735628491,0.118193840883968,0,0.235479278551542,0.628462359664008,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,1.69354820076372,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0.594092800654172,0,0,0.281951753939561,0.709036767709349,0,0,0,0,0,0.458729283404541,2.15009374727177,0,0.135982980381829,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.724030971033267,0.639701945702943,0.952257725854961,0,0.0620747142958579,0,0,0.808468755832877,0.653150243690884,0.342233301085281,0.26940821205835,0.143444410785353,0,0,0,0,0,0,0.611207220914332,1.22068853494722,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.38856200643038,1.69592382577203,1.25849830862972,2.75118041940067,0.626984899610432,5.68516870172524,3.5576626268671,3.01248551488203,2.41697590265488,3.04108842287405,2.68468263302986,4.04429388380456,1.62028389576352,3.03619076165871,1.34717623575702,1.0135033243499,0,0,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.653847612453835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,2.47330397904978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680374821106063,0.431831832204279,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,1.06606955203727,0,0.31396051279005,0.831058409500782,0.676786981851542,1.37243774022418,1.1747511088309,0.948768663620925,0.317873157960757,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0.202203398942031,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0,1.09524303113594,0,0,0,1.39641200636127,1.83328339209347,1.43574604915363,0.599037001496973,1.28767814440971,0,0.335917362433631,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0.258565912723101,2.24795422962573,0,0,0.106787412567695,1.10043013569766,2.89967338743037,0,0,0,0,0,0.2506898940227,0,0,0,0,0,1.8778639605975,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,1.03343398250592,0.126831620387814,0,0,4.96211178389294,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0.354809480650555,0,0,0,0.0657727735628491,0.118193840883968,0,0.235479278551542,0.628462359664008,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,1.69354820076372,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0.594092800654172,0,0,0.281951753939561,0.709036767709349,0,0,0,0,0,0.458729283404541,2.15009374727177,0,0.135982980381829,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.724030971033267,0.639701945702943,0.952257725854961,0,0.0620747142958579,0,0,0.808468755832877,0.653150243690884,0.342233301085281,0.26940821205835,0.143444410785353,0,0,0,0,0,0,0.611207220914332,1.22068853494722,0,0.603821380773079,0 | ||
|short_description=p1@MIR126 | |||
}} | }} |
Latest revision as of 12:51, 16 September 2015
Short description: | p1@MIR126 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR126_5end |
Coexpression cluster: | NA |
Association with transcript: | 72bp_to_NR_029695_5end |
EntrezGene: | MIR126 |
HGNC: | 31508 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.86e-50 | 24 |
blood vessel endothelial cell | 1.33e-37 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.33e-37 | 18 |
endothelial cell | 6.73e-37 | 36 |
meso-epithelial cell | 9.90e-29 | 45 |
lining cell | 3.57e-24 | 58 |
barrier cell | 3.57e-24 | 58 |
endothelial cell of artery | 1.46e-19 | 9 |
capillary endothelial cell | 3.12e-16 | 3 |
endothelial cell of umbilical vein | 3.11e-15 | 3 |
lymphangioblast | 2.70e-14 | 6 |
endothelial cell of lymphatic vessel | 2.70e-14 | 6 |
vascular lymphangioblast | 2.70e-14 | 6 |
aortic endothelial cell | 1.16e-13 | 6 |
thoracic aorta endothelial cell | 2.59e-11 | 2 |
squamous epithelial cell | 1.19e-10 | 63 |
mesodermal cell | 1.80e-09 | 121 |
vein endothelial cell | 7.43e-08 | 6 |