FFCP PHASE1:Hg19::chr9:139640662..139640673,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158062 | |EntrezGene=158062 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17337 | |HGNC=17337 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-188bp_to_ENST00000476567_5end | |association_with_transcript=-188bp_to_ENST00000476567_5end | ||
|cluster_id=chr9:139640662..139640673,- | |||
|description=CAGE_peak_7_at_LCN6_5end | |description=CAGE_peak_7_at_LCN6_5end | ||
|id=chr9:139640662..139640673,- | |id=chr9:139640662..139640673,- | ||
|ontology_enrichment_celltype=CL:0002274!4.22e-07!5;CL:0000457!4.22e-07!5;CL:0002191!4.22e-07!5;CL:0000097!4.22e-07!5;CL:0000831!4.22e-07!5;CL:0002028!4.22e-07!5 | |ontology_enrichment_celltype=CL:0002274!4.22e-07!5;CL:0000457!4.22e-07!5;CL:0002191!4.22e-07!5;CL:0000097!4.22e-07!5;CL:0000831!4.22e-07!5;CL:0002028!4.22e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.46e-45;5!CL:0000163;1.63e-25;9!CL:0000151;5.64e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.20e-45,5;CL:0002028,2.20e-45,5;CL:0000163,1.27e-25,9;CL:0000151,6.39e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0010226;7.62e-26;1!UBERON:0005062;1.40e-07;4!UBERON:0007284;1.40e-07;4 | |||
|ontology_enrichment_disease=DOID:114!7.82e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.13e-48!115;UBERON:0003978!3.72e-11!3;UBERON:0009751!3.72e-11!3;UBERON:0000946!3.72e-11!3;UBERON:0002523!3.72e-11!3;UBERON:0005983!3.72e-11!3;UBERON:0002165!3.72e-11!3;UBERON:0002062!3.72e-11!3;UBERON:0007280!3.72e-11!3;UBERON:0003075!2.71e-08!86;UBERON:0007284!2.71e-08!86;UBERON:0002133!5.98e-08!2;UBERON:0002346!9.62e-08!90;UBERON:0001049!3.17e-07!57;UBERON:0005068!3.17e-07!57;UBERON:0006241!3.17e-07!57;UBERON:0007135!3.17e-07!57;UBERON:0007100!9.83e-07!27 | |ontology_enrichment_uberon=UBERON:0007023!5.13e-48!115;UBERON:0003978!3.72e-11!3;UBERON:0009751!3.72e-11!3;UBERON:0000946!3.72e-11!3;UBERON:0002523!3.72e-11!3;UBERON:0005983!3.72e-11!3;UBERON:0002165!3.72e-11!3;UBERON:0002062!3.72e-11!3;UBERON:0007280!3.72e-11!3;UBERON:0003075!2.71e-08!86;UBERON:0007284!2.71e-08!86;UBERON:0002133!5.98e-08!2;UBERON:0002346!9.62e-08!90;UBERON:0001049!3.17e-07!57;UBERON:0005068!3.17e-07!57;UBERON:0006241!3.17e-07!57;UBERON:0007135!3.17e-07!57;UBERON:0007100!9.83e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;6.51e-34;3!UBERON:0002134;2.78e-26;1!UBERON:0005208;2.78e-26;1!UBERON:0004145;2.78e-26;1!UBERON:0005946;2.78e-26;1!UBERON:0005965;2.78e-26;1!UBERON:0002078;2.78e-26;1!UBERON:0002084;7.62e-26;1!UBERON:0002082;7.62e-26;1!UBERON:0002081;7.30e-14;2!UBERON:0002133;7.30e-14;2!UBERON:0003978;1.10e-09;3!UBERON:0000946;1.10e-09;3!UBERON:0007100;1.31e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,7.70e-34,3;UBERON:0002134,3.58e-26,1;UBERON:0005208,3.58e-26,1;UBERON:0005946,3.58e-26,1;UBERON:0005965,3.58e-26,1;UBERON:0002078,3.58e-26,1;UBERON:0002084,7.62e-26,1;UBERON:0002082,7.62e-26,1;UBERON:0010226,7.62e-26,1;UBERON:0002081,8.28e-14,2;UBERON:0002133,8.28e-14,2;UBERON:0010227,8.28e-14,2;UBERON:0003978,1.19e-09,3;UBERON:0009751,1.19e-09,3;UBERON:0000946,1.19e-09,3;UBERON:0002523,1.19e-09,3;UBERON:0005983,1.19e-09,3;UBERON:0004145,1.19e-09,3;UBERON:0002165,1.19e-09,3;UBERON:0002062,1.19e-09,3;UBERON:0007280,1.19e-09,3;UBERON:0007100,6.58e-09,27 | |||
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| ||
|short_description=p7@LCN6 | |short_description=p7@LCN6 | ||
}} | }} |
Latest revision as of 13:07, 16 September 2015
Short description: | p7@LCN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LCN6_5end |
Coexpression cluster: | NA |
Association with transcript: | -188bp_to_ENST00000476567_5end |
EntrezGene: | LCN6 |
HGNC: | 17337 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.20e-45 | 5 |
basophil mast progenitor cell | 2.20e-45 | 5 |
endocrine cell | 1.27e-25 | 9 |
secretory cell | 6.39e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 7.70e-34 | 3 |
tricuspid valve | 3.58e-26 | 1 |
right atrium valve | 3.58e-26 | 1 |
outflow tract of atrium | 3.58e-26 | 1 |
outflow part of right atrium | 3.58e-26 | 1 |
right cardiac atrium | 3.58e-26 | 1 |
heart left ventricle | 7.62e-26 | 1 |
cardiac ventricle | 7.62e-26 | 1 |
future cardiac ventricle | 7.62e-26 | 1 |
cardiac atrium | 8.28e-14 | 2 |
atrioventricular valve | 8.28e-14 | 2 |
future cardiac atrium | 8.28e-14 | 2 |
valve | 1.19e-09 | 3 |
cardiac mesenchyme | 1.19e-09 | 3 |
cardial valve | 1.19e-09 | 3 |
tunica intima | 1.19e-09 | 3 |
heart layer | 1.19e-09 | 3 |
outflow tract | 1.19e-09 | 3 |
endocardium | 1.19e-09 | 3 |
endocardial cushion | 1.19e-09 | 3 |
presumptive endocardium | 1.19e-09 | 3 |
primary circulatory organ | 6.58e-09 | 27 |