FFCP PHASE1:Hg19::chr9:139693886..139693910,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84960 | |EntrezGene=84960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28236 | |HGNC=28236 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000430612_5end | |||
|cluster_id=chr9:139693886..139693910,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_5_at_KIAA1984_5end | |||
|id=chr9:139693886..139693910,+ | |||
|ontology_enrichment_celltype=CL:0002195!4.95e-12!2;CL:0002571!4.95e-12!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.42e-22;12!CL:0002535;1.78e-15;2!CL:0002327;2.26e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.42e-22,12;CL:0002535,1.78e-15,2;CL:0002327,2.26e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.37e-29;1!UBERON:0004161;5.23e-24;11!UBERON:0009497;1.90e-20;13!UBERON:0003104;5.27e-15;31!UBERON:0001041;2.76e-09;30 | |||
|ontology_enrichment_disease=DOID:5093!2.84e-13!4;DOID:1612!2.84e-13!4;DOID:7!3.19e-10!39;DOID:305!5.17e-10!106;DOID:0050687!1.44e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:7;5.07e-17;39!DOID:5093;2.26e-08;4!DOID:1612;2.26e-08;4!DOID:305;1.44e-07;106!DOID:4362;5.70e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:7,1.65e-18,39;DOID:305,2.72e-13,106;DOID:0050687,6.71e-10,143;DOID:5093,2.26e-08,4;DOID:1612,2.26e-08,4;DOID:4362,5.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.64e-08!129;UBERON:0004185!1.64e-08!129;UBERON:0000059!2.88e-08!11;UBERON:0007499!1.34e-07!25;UBERON:0002107!2.54e-07!19;UBERON:0006925!2.54e-07!19;UBERON:0008836!2.54e-07!19;UBERON:0009856!2.78e-07!26;UBERON:0001046!6.92e-07!19;UBERON:0003929!8.34e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.78e-15;2!UBERON:0004801;1.78e-15;2!UBERON:0002365;2.17e-14;31!UBERON:0002330;2.17e-14;31!UBERON:0002107;3.02e-14;19!UBERON:0006925;3.02e-14;19!UBERON:0002423;5.28e-11;25!UBERON:0001911;2.26e-08;4!UBERON:0002368;6.44e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.78e-15,2;UBERON:0004801,1.78e-15,2;UBERON:0002365,3.48e-15,31;UBERON:0002330,3.48e-15,31;UBERON:0002107,3.02e-14,19;UBERON:0006925,3.02e-14,19;UBERON:0008836,3.02e-14,19;UBERON:0008835,2.09e-12,22;UBERON:0003894,2.09e-12,22;UBERON:0009854,6.73e-12,23;UBERON:0007499,5.28e-11,25;UBERON:0009497,5.28e-11,25;UBERON:0000015,5.28e-11,25;UBERON:0002423,5.28e-11,25;UBERON:0006235,5.28e-11,25;UBERON:0004161,5.28e-11,25;UBERON:0009856,1.31e-10,26;UBERON:0005172,6.41e-09,54;UBERON:0005173,6.41e-09,54;UBERON:0001911,2.26e-08,4;UBERON:0005333,2.26e-08,4;UBERON:0008425,2.26e-08,4;UBERON:0005311,2.26e-08,4;UBERON:0002530,3.30e-08,59;UBERON:0002417,4.53e-08,60;UBERON:0000916,4.53e-08,60;UBERON:0002368,4.72e-08,35 | |||
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|short_description=p5@KIAA1984 | |||
}} | }} |
Latest revision as of 13:24, 16 September 2015
Short description: | p5@KIAA1984 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KIAA1984_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 19bp_to_ENST00000430612_5end |
EntrezGene: | KIAA1984 |
HGNC: | 28236 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.42e-22 | 12 |
epithelial cell of cervix | 1.78e-15 | 2 |
mammary gland epithelial cell | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.78e-15 | 2 |
cervix epithelium | 1.78e-15 | 2 |
exocrine gland | 3.48e-15 | 31 |
exocrine system | 3.48e-15 | 31 |
liver | 3.02e-14 | 19 |
digestive gland | 3.02e-14 | 19 |
liver bud | 3.02e-14 | 19 |
hepatic diverticulum | 2.09e-12 | 22 |
liver primordium | 2.09e-12 | 22 |
digestive tract diverticulum | 6.73e-12 | 23 |
epithelial sac | 5.28e-11 | 25 |
epithelium of foregut-midgut junction | 5.28e-11 | 25 |
anatomical boundary | 5.28e-11 | 25 |
hepatobiliary system | 5.28e-11 | 25 |
foregut-midgut junction | 5.28e-11 | 25 |
septum transversum | 5.28e-11 | 25 |
sac | 1.31e-10 | 26 |
abdomen element | 6.41e-09 | 54 |
abdominal segment element | 6.41e-09 | 54 |
mammary gland | 2.26e-08 | 4 |
mammary bud | 2.26e-08 | 4 |
mammary ridge | 2.26e-08 | 4 |
mammary placode | 2.26e-08 | 4 |
gland | 3.30e-08 | 59 |
abdominal segment of trunk | 4.53e-08 | 60 |
abdomen | 4.53e-08 | 60 |
endocrine gland | 4.72e-08 | 35 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.65e-18 | 39 |
carcinoma | 2.72e-13 | 106 |
cell type cancer | 6.71e-10 | 143 |
thoracic cancer | 2.26e-08 | 4 |
breast cancer | 2.26e-08 | 4 |
cervical cancer | 5.70e-07 | 5 |