FFCP PHASE1:Hg19::chr2:25383828..25383855,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5443 | |EntrezGene=5443 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9201 | |HGNC=9201 | ||
|TSSclassifier=strong | |||
|UniProt=Q6LDP0 | |UniProt=Q6LDP0 | ||
|association_with_transcript=122bp_to_M28636_5end | |||
|cluster_id=chr2:25383828..25383855,- | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_4_at_POMC_5end | |||
|id=chr2:25383828..25383855,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002363;7.05e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,7.05e-34,2;CL:0000008,7.05e-34,2 | |||
|ontology_enrichment_development_v019=CL:0000008;7.05e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!3.95e-14!4;UBERON:0010133!3.95e-14!4;UBERON:0000007!4.14e-13!2;UBERON:0007023!4.23e-09!115;UBERON:0002240!1.28e-08!3;UBERON:0001896!2.08e-08!3;UBERON:0005290!2.08e-08!3;UBERON:0010096!2.08e-08!3;UBERON:0001894!2.91e-08!7;UBERON:0006222!2.91e-08!7;UBERON:0001049!5.13e-08!57;UBERON:0005068!5.13e-08!57;UBERON:0006241!5.13e-08!57;UBERON:0007135!5.13e-08!57;UBERON:0001301!6.02e-07!1;UBERON:0001874!6.76e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.61e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0003566;7.05e-34;2!UBERON:0001777;7.05e-34;2!UBERON:0003891;1.03e-17;4!UBERON:0000964;1.03e-17;4!UBERON:0010409;1.03e-17;4!UBERON:0002368;1.20e-08;33!UBERON:0010313;6.56e-08;10!UBERON:0002780;4.32e-07;41!UBERON:0001890;4.32e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.61e-131,2;UBERON:0003296,2.40e-66,4;UBERON:0010133,2.40e-66,4;UBERON:0001894,1.49e-38,7;UBERON:0006222,1.49e-38,7;UBERON:0003566,7.05e-34,2;UBERON:0001777,7.05e-34,2;UBERON:0003891,1.03e-17,4;UBERON:0000964,1.03e-17,4;UBERON:0010409,1.03e-17,4;UBERON:0004348,1.03e-17,4;UBERON:0005427,1.03e-17,4;UBERON:0003056,1.22e-10,61;UBERON:0002368,1.09e-08,35;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0005062,6.56e-08,10;UBERON:0002346,7.10e-08,86;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41;UBERON:0000949,5.42e-07,45 | |||
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|short_description=p4@POMC | |||
}} | }} |
Latest revision as of 13:32, 16 September 2015
Short description: | p4@POMC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_POMC_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | 122bp_to_M28636_5end |
EntrezGene: | POMC |
HGNC: | 9201 |
UniProt: | Q6LDP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 7.05e-34 | 2 |
migratory cranial neural crest cell | 7.05e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.61e-131 | 2 |
gland of diencephalon | 2.40e-66 | 4 |
neuroendocrine gland | 2.40e-66 | 4 |
diencephalon | 1.49e-38 | 7 |
future diencephalon | 1.49e-38 | 7 |
head connective tissue | 7.05e-34 | 2 |
substantia propria of cornea | 7.05e-34 | 2 |
stroma | 1.03e-17 | 4 |
cornea | 1.03e-17 | 4 |
eye surface | 1.03e-17 | 4 |
optic eminence | 1.03e-17 | 4 |
corneal primordium | 1.03e-17 | 4 |
pre-chordal neural plate | 1.22e-10 | 61 |
endocrine gland | 1.09e-08 | 35 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neural crest-derived structure | 6.56e-08 | 10 |
neural crest | 6.56e-08 | 10 |
neural fold | 6.56e-08 | 10 |
neurectoderm | 7.10e-08 | 86 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |
endocrine system | 5.42e-07 | 45 |