FFCP PHASE1:Hg19::chr1:12402867..12402887,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:12402867..12402887,+
|short_description=p9@VPS13D
|description=CAGE_peak_9_at_VPS13D_5end
|association_with_transcript=-208bp_to_AK057675_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55187 | |EntrezGene=55187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23595 | |HGNC=23595 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-208bp_to_AK057675_5end | |||
|cluster_id=chr1:12402867..12402887,+ | |||
|description=CAGE_peak_9_at_VPS13D_5end | |||
|id=chr1:12402867..12402887,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.43e-09;2!CL:0000242;3.43e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.43e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;7.00e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;7.33e-32;2!DOID:178;1.04e-16;1!DOID:326;1.04e-16;1!DOID:3978;1.04e-16;1!DOID:3394;1.04e-16;1!DOID:5844;1.04e-16;1!DOID:1287;1.79e-16;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.57e-32,2;DOID:178,1.21e-16,1;DOID:326,1.21e-16,1;DOID:3978,1.21e-16,1;DOID:3394,1.21e-16,1;DOID:5844,1.21e-16,1;DOID:1287,1.93e-16,4 | |||
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| ||
|short_description=p9@VPS13D | |||
}} | }} |
Latest revision as of 13:59, 16 September 2015
Short description: | p9@VPS13D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_VPS13D_5end |
Coexpression cluster: | NA |
Association with transcript: | -208bp_to_AK057675_5end |
EntrezGene: | VPS13D |
HGNC: | 23595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.43e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 1.87e-31 | 2 |
frontal cortex | 2.41e-21 | 3 |
neocortex | 4.70e-18 | 20 |
pulmonary valve | 8.86e-17 | 1 |
semi-lunar valve | 8.86e-17 | 1 |
regional part of cerebral cortex | 1.71e-16 | 22 |
cerebral cortex | 1.34e-14 | 25 |
pallium | 1.34e-14 | 25 |
primary circulatory organ | 2.30e-14 | 27 |
parietal lobe | 4.66e-13 | 5 |
regional part of telencephalon | 1.63e-11 | 32 |
cerebral hemisphere | 1.63e-11 | 32 |
gyrus | 3.57e-11 | 6 |
brain grey matter | 7.41e-11 | 34 |
gray matter | 7.41e-11 | 34 |
telencephalon | 7.41e-11 | 34 |
adult organism | 4.75e-10 | 114 |
regional part of forebrain | 4.78e-09 | 41 |
forebrain | 4.78e-09 | 41 |
anterior neural tube | 4.78e-09 | 41 |
future forebrain | 4.78e-09 | 41 |
regional part of nervous system | 5.00e-07 | 53 |
regional part of brain | 5.00e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.57e-32 | 2 |
vascular disease | 1.21e-16 | 1 |
ischemia | 1.21e-16 | 1 |
extrinsic cardiomyopathy | 1.21e-16 | 1 |
myocardial ischemia | 1.21e-16 | 1 |
myocardial infarction | 1.21e-16 | 1 |
cardiovascular system disease | 1.93e-16 | 4 |