FFCP PHASE1:Hg19::chr7:137028246..137028346,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5764 | |EntrezGene=5764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9630 | |HGNC=9630 | ||
|TSSclassifier=strong | |||
|UniProt=C9JR52 | |UniProt=C9JR52 | ||
|association_with_transcript=173bp_to_ENST00000393083_5end | |association_with_transcript=173bp_to_ENST00000393083_5end | ||
|cluster_id=chr7:137028246..137028346,- | |||
|coexpression_cluster_id=C361 | |coexpression_cluster_id=C361 | ||
|description=CAGE_peak_1_at_PTN_5end | |description=CAGE_peak_1_at_PTN_5end |
Latest revision as of 14:07, 16 September 2015
Short description: | p1@PTN |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTN_5end |
Coexpression cluster: | C361_Neural_Astrocyte_Neurons_spinal_Chondrocyte_Fibroblast_sacrococcigeal |
Association with transcript: | 173bp_to_ENST00000393083_5end |
EntrezGene: | PTN |
HGNC: | 9630 |
UniProt: | C9JR52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@PTN |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.16e-09 | 61 |
electrically active cell | 3.16e-09 | 61 |
fibroblast | 5.48e-09 | 76 |
muscle cell | 1.74e-07 | 55 |
muscle precursor cell | 1.91e-07 | 58 |
myoblast | 1.91e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.91e-07 | 58 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.28e-37 | 81 |
nervous system | 1.25e-34 | 89 |
structure with developmental contribution from neural crest | 1.04e-32 | 132 |
ectoderm-derived structure | 2.12e-32 | 171 |
ectoderm | 2.12e-32 | 171 |
presumptive ectoderm | 2.12e-32 | 171 |
neural plate | 1.57e-30 | 82 |
presumptive neural plate | 1.57e-30 | 82 |
brain | 3.13e-30 | 68 |
future brain | 3.13e-30 | 68 |
Showing 1 to 10 of 71 entries